RNA–Protein interactions for RNA: ENST00000476972.6

GMDS-204, Transcript of GDP-mannose 4,6-dehydratase, humanhuman

TSL 2

Gene GMDS, Length 591 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GMDS-204ENST00000476972 EHD2Q9NZN4 543 aa20.23■□□□□ 0.83
GMDS-204ENST00000476972 ARMCX3Q9UH62 379 aaPredicted RBP20.23■□□□□ 0.83
GMDS-204ENST00000476972 CTNND2Q9UQB3 1225 aa20.23■□□□□ 0.83
GMDS-204ENST00000476972 TRAV19A0A0A6YYK7 116 aa20.22■□□□□ 0.83
GMDS-204ENST00000476972 OTOL1A6NHN0 477 aaPredicted RBP20.22■□□□□ 0.83
GMDS-204ENST00000476972 CD58P19256 250 aa20.22■□□□□ 0.83
GMDS-204ENST00000476972 ZNF268Q14587 947 aaPredicted RBP20.22■□□□□ 0.83
GMDS-204ENST00000476972 TTI2Q6NXR4 508 aa20.22■□□□□ 0.83
GMDS-204ENST00000476972 CEP68Q76N32 757 aa20.22■□□□□ 0.83
GMDS-204ENST00000476972 CRYBG2Q8N1P7 616 aa20.22■□□□□ 0.83
GMDS-204ENST00000476972 NETO1Q8TDF5 533 aa20.22■□□□□ 0.83
GMDS-204ENST00000476972 NELFBQ8WX92 580 aa20.22■□□□□ 0.83
GMDS-204ENST00000476972 CEP63Q96MT8 703 aa20.22■□□□□ 0.83
GMDS-204ENST00000476972 KCNK16Q96T55 309 aa20.22■□□□□ 0.83
GMDS-204ENST00000476972 DUSP9Q99956 384 aaKnown RBP20.22■□□□□ 0.83
GMDS-204ENST00000476972 DMAP1Q9NPF5 467 aaPredicted RBP20.22■□□□□ 0.83
GMDS-204ENST00000476972 FAM49BQ9NUQ9 324 aa20.22■□□□□ 0.83
GMDS-204ENST00000476972 RAB20Q9NX57 234 aa20.22■□□□□ 0.83
GMDS-204ENST00000476972 ACACBO00763 2458 aa20.21■□□□□ 0.83
GMDS-204ENST00000476972 SLC30A4O14863 429 aa20.21■□□□□ 0.83
GMDS-204ENST00000476972 GDF9O60383 454 aa20.21■□□□□ 0.83
GMDS-204ENST00000476972 AP1G2O75843 785 aa20.21■□□□□ 0.83
GMDS-204ENST00000476972 CKMP06732 381 aa20.21■□□□□ 0.83
GMDS-204ENST00000476972 PXNP49023 591 aaPredicted RBP20.21■□□□□ 0.83
GMDS-204ENST00000476972 IFRD2Q12894 506 aaPredicted RBP20.21■□□□□ 0.83
GMDS-204ENST00000476972 RUNX3Q13761 415 aa20.21■□□□□ 0.83
GMDS-204ENST00000476972 TRIM68Q6AZZ1 485 aa20.21■□□□□ 0.83
GMDS-204ENST00000476972 PKN3Q6P5Z2 889 aa20.21■□□□□ 0.83
GMDS-204ENST00000476972 PRR23CQ6ZRP0 262 aa20.21■□□□□ 0.83
GMDS-204ENST00000476972 WDR5BQ86VZ2 330 aa20.21■□□□□ 0.83
GMDS-204ENST00000476972 FAM160A2Q8N612 972 aaPredicted RBP20.21■□□□□ 0.83
GMDS-204ENST00000476972 ARL14EPQ8N8R7 260 aaPredicted RBP20.21■□□□□ 0.83
GMDS-204ENST00000476972 C12orf29Q8N999 325 aa20.21■□□□□ 0.83
GMDS-204ENST00000476972 SLC2A14Q8TDB8 520 aa20.21■□□□□ 0.83
GMDS-204ENST00000476972 SLC35C1Q96A29 364 aa20.21■□□□□ 0.83
GMDS-204ENST00000476972 CYP2S1Q96SQ9 504 aa20.21■□□□□ 0.83
GMDS-204ENST00000476972 EBF3Q9H4W6 596 aa20.21■□□□□ 0.83
GMDS-204ENST00000476972 HPS4Q9NQG7 708 aa20.21■□□□□ 0.83
GMDS-204ENST00000476972 TRPM5Q9NZQ8 1165 aa20.21■□□□□ 0.83
GMDS-204ENST00000476972 GCNT4Q9P109 453 aa20.21■□□□□ 0.83
GMDS-204ENST00000476972 MYH10P35580 1976 aa20.21■□□□□ 0.83
GMDS-204ENST00000476972 CILPO75339 1184 aa20.2■□□□□ 0.82
GMDS-204ENST00000476972 USP17L7P0C7H9 530 aa20.2■□□□□ 0.82
GMDS-204ENST00000476972 TAF10Q12962 218 aa20.2■□□□□ 0.82
GMDS-204ENST00000476972 USP4Q13107 963 aa20.2■□□□□ 0.82
GMDS-204ENST00000476972 CAMK4Q16566 473 aa20.2■□□□□ 0.82
GMDS-204ENST00000476972 TMEM196Q5HYL7 178 aa20.2■□□□□ 0.82
GMDS-204ENST00000476972 FSTL4Q6MZW2 842 aa20.2■□□□□ 0.82
GMDS-204ENST00000476972 FOXR2Q6PJQ5 311 aa20.2■□□□□ 0.82
GMDS-204ENST00000476972 NUP93Q8N1F7 819 aa20.2■□□□□ 0.82
GMDS-204ENST00000476972 WHAMMQ8TF30 809 aa20.2■□□□□ 0.82
GMDS-204ENST00000476972 CHFRQ96EP1 664 aa20.2■□□□□ 0.82
GMDS-204ENST00000476972 NT5C1AQ9BXI3 368 aa20.2■□□□□ 0.82
GMDS-204ENST00000476972 METTL14Q9HCE5 456 aaKnown RBP20.2■□□□□ 0.82
GMDS-204ENST00000476972 MYO16Q9Y6X6 1858 aa20.2■□□□□ 0.82
GMDS-204ENST00000476972 BICDL2A1A5D9 508 aa20.19■□□□□ 0.82
GMDS-204ENST00000476972 ZNF840PA6NDX5 716 aa20.19■□□□□ 0.82
GMDS-204ENST00000476972 TNFRSF10BO14763 440 aa20.19■□□□□ 0.82
GMDS-204ENST00000476972 RTN3O95197 1032 aaPredicted RBP20.19■□□□□ 0.82
GMDS-204ENST00000476972 TRIM21P19474 475 aaKnown RBP20.19■□□□□ 0.82
GMDS-204ENST00000476972 SLC5A3P53794 718 aa20.19■□□□□ 0.82
GMDS-204ENST00000476972 STX17P56962 302 aa20.19■□□□□ 0.82
GMDS-204ENST00000476972 GRSF1Q12849 480 aaKnown RBP eCLIP20.19■□□□□ 0.82
GMDS-204ENST00000476972 PAK1Q13153 545 aa20.19■□□□□ 0.82
GMDS-204ENST00000476972 ZNF77Q15935 545 aa20.19■□□□□ 0.82
GMDS-204ENST00000476972 CCDC40Q4G0X9 1142 aa20.19■□□□□ 0.82
GMDS-204ENST00000476972 FILIP1Q7Z7B0 1213 aa20.19■□□□□ 0.82
GMDS-204ENST00000476972 TRIML1Q8N9V2 468 aa20.19■□□□□ 0.82
GMDS-204ENST00000476972 ZMIZ2Q8NF64 920 aa20.19■□□□□ 0.82
GMDS-204ENST00000476972 FAXDC2Q96IV6 333 aa20.19■□□□□ 0.82
GMDS-204ENST00000476972 SLITRK1Q96PX8 696 aa20.19■□□□□ 0.82
GMDS-204ENST00000476972 SMOQ99835 787 aa20.19■□□□□ 0.82
GMDS-204ENST00000476972 ARID3AQ99856 593 aa20.19■□□□□ 0.82
GMDS-204ENST00000476972 FBRSL1Q9HCM7 1045 aaKnown RBP20.19■□□□□ 0.82
GMDS-204ENST00000476972 KIAA1468Q9P260 1216 aa20.19■□□□□ 0.82
GMDS-204ENST00000476972 COQ4Q9Y3A0 265 aa20.19■□□□□ 0.82
GMDS-204ENST00000476972 TRDMT1O14717 391 aaKnown RBP20.18■□□□□ 0.82
GMDS-204ENST00000476972 AXIN1O15169 862 aa20.18■□□□□ 0.82
GMDS-204ENST00000476972 BEST1O76090 585 aa20.18■□□□□ 0.82
GMDS-204ENST00000476972 FAM200BP0CF97 657 aa20.18■□□□□ 0.82
GMDS-204ENST00000476972 ARSAP15289 507 aa20.18■□□□□ 0.82
GMDS-204ENST00000476972 HDCP19113 662 aa20.18■□□□□ 0.82
GMDS-204ENST00000476972 YWHAQP27348 245 aa20.18■□□□□ 0.82
GMDS-204ENST00000476972 ADORA2BP29275 332 aa20.18■□□□□ 0.82
GMDS-204ENST00000476972 PPP3CCP48454 512 aa20.18■□□□□ 0.82
GMDS-204ENST00000476972 PDE6CP51160 858 aa20.18■□□□□ 0.82
GMDS-204ENST00000476972 MTF1Q14872 753 aa20.18■□□□□ 0.82
GMDS-204ENST00000476972 PPM1JQ5JR12 505 aa20.18■□□□□ 0.82
GMDS-204ENST00000476972 CC2D1AQ6P1N0 951 aaPredicted RBP20.18■□□□□ 0.82
GMDS-204ENST00000476972 TTC16Q8NEE8 873 aa20.18■□□□□ 0.82
GMDS-204ENST00000476972 SCAMP5Q8TAC9 235 aa20.18■□□□□ 0.82
GMDS-204ENST00000476972 TATDN2Q93075 761 aa20.18■□□□□ 0.82
GMDS-204ENST00000476972 FBXO32Q969P5 355 aa20.18■□□□□ 0.82
GMDS-204ENST00000476972 CSNK1G1Q9HCP0 422 aa20.18■□□□□ 0.82
GMDS-204ENST00000476972 POLR3BQ9NW08 1133 aaPredicted RBP20.18■□□□□ 0.82
GMDS-204ENST00000476972 ATG13O75143 517 aa20.17■□□□□ 0.82
GMDS-204ENST00000476972 ADRB1P08588 477 aa20.17■□□□□ 0.82
GMDS-204ENST00000476972 PFKLP17858 780 aa20.17■□□□□ 0.82
GMDS-204ENST00000476972 GALK1P51570 392 aa20.17■□□□□ 0.82
GMDS-204ENST00000476972 MAP3K7CLP57077 242 aa20.17■□□□□ 0.82
Retrieved 100 of 20,778 RNA–protein pairs in 55.6 ms