RNA–Protein interactions for RNA: ENST00000476387.1

COL1A1-205, Transcript of collagen type I alpha 1 chain, humanhuman

TSL 2

Gene COL1A1, Length 600 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL1A1-205ENST00000476387 RETP07949 1114 aa17.17■□□□□ 0.34
COL1A1-205ENST00000476387 DRD1P21728 446 aa17.17■□□□□ 0.34
COL1A1-205ENST00000476387 BMP6P22004 513 aa17.17■□□□□ 0.34
COL1A1-205ENST00000476387 GJA4P35212 333 aa17.17■□□□□ 0.34
COL1A1-205ENST00000476387 IFNAR2P48551 515 aa17.17■□□□□ 0.34
COL1A1-205ENST00000476387 MCCD1P59942 119 aaPredicted RBP17.17■□□□□ 0.34
COL1A1-205ENST00000476387 ARHGAP8P85298 464 aa17.17■□□□□ 0.34
COL1A1-205ENST00000476387 LMNB2Q03252 620 aa17.17■□□□□ 0.34
COL1A1-205ENST00000476387 PAK1Q13153 545 aa17.17■□□□□ 0.34
COL1A1-205ENST00000476387 CAMK4Q16566 473 aa17.17■□□□□ 0.34
COL1A1-205ENST00000476387 FBXO43Q4G163 708 aa17.17■□□□□ 0.34
COL1A1-205ENST00000476387 WDR5BQ86VZ2 330 aa17.17■□□□□ 0.34
COL1A1-205ENST00000476387 SH3RF2Q8TEC5 729 aa17.17■□□□□ 0.34
COL1A1-205ENST00000476387 SMARCD1Q96GM5 515 aa17.17■□□□□ 0.34
COL1A1-205ENST00000476387 P2RY13Q9BPV8 354 aa17.17■□□□□ 0.34
COL1A1-205ENST00000476387 APOBEC3GQ9HC16 384 aaKnown RBP17.17■□□□□ 0.34
COL1A1-205ENST00000476387 KIAA1468Q9P260 1216 aa17.17■□□□□ 0.34
COL1A1-205ENST00000476387 HMGXB4Q9UGU5 601 aa17.17■□□□□ 0.34
COL1A1-205ENST00000476387 CCDC163A0A0D9SF12 145 aa17.16■□□□□ 0.34
COL1A1-205ENST00000476387 ZNF840PA6NDX5 716 aa17.16■□□□□ 0.34
COL1A1-205ENST00000476387 PPP1R3GB7ZBB8 358 aa17.16■□□□□ 0.34
COL1A1-205ENST00000476387 CD58P19256 250 aa17.16■□□□□ 0.34
COL1A1-205ENST00000476387 TGM1P22735 817 aa17.16■□□□□ 0.34
COL1A1-205ENST00000476387 USP46P62068 366 aa17.16■□□□□ 0.34
COL1A1-205ENST00000476387 INCA1Q0VD86 236 aa17.16■□□□□ 0.34
COL1A1-205ENST00000476387 NR1H3Q13133 447 aa17.16■□□□□ 0.34
COL1A1-205ENST00000476387 ORC1Q13415 861 aa17.16■□□□□ 0.34
COL1A1-205ENST00000476387 SIM2Q14190 667 aaPredicted RBP17.16■□□□□ 0.34
COL1A1-205ENST00000476387 EML3Q32P44 896 aa17.16■□□□□ 0.34
COL1A1-205ENST00000476387 TTI2Q6NXR4 508 aa17.16■□□□□ 0.34
COL1A1-205ENST00000476387 FOXR2Q6PJQ5 311 aa17.16■□□□□ 0.34
COL1A1-205ENST00000476387 PRR23BQ6ZRT6 265 aa17.16■□□□□ 0.34
COL1A1-205ENST00000476387 DGLUCYQ7Z3D6 616 aa17.16■□□□□ 0.34
COL1A1-205ENST00000476387 NT5C1AQ9BXI3 368 aa17.16■□□□□ 0.34
COL1A1-205ENST00000476387 DMAP1Q9NPF5 467 aaPredicted RBP17.16■□□□□ 0.34
COL1A1-205ENST00000476387 KRT82Q9NSB4 513 aa17.16■□□□□ 0.34
COL1A1-205ENST00000476387 RAB20Q9NX57 234 aa17.16■□□□□ 0.34
COL1A1-205ENST00000476387 WNT6Q9Y6F9 365 aa17.16■□□□□ 0.34
COL1A1-205ENST00000476387 DNAH14Q0VDD8 3507 aa17.15■□□□□ 0.34
COL1A1-205ENST00000476387 AP1G2O75843 785 aa17.15■□□□□ 0.34
COL1A1-205ENST00000476387 RTN3O95197 1032 aaPredicted RBP17.15■□□□□ 0.34
COL1A1-205ENST00000476387 OLFM2O95897 454 aa17.15■□□□□ 0.34
COL1A1-205ENST00000476387 EGFP01133 1207 aa17.15■□□□□ 0.34
COL1A1-205ENST00000476387 CCDC130P13994 396 aa17.15■□□□□ 0.34
COL1A1-205ENST00000476387 GALK1P51570 392 aa17.15■□□□□ 0.34
COL1A1-205ENST00000476387 CACNA2D1P54289 1103 aa17.15■□□□□ 0.34
COL1A1-205ENST00000476387 SLC7A9P82251 487 aa17.15■□□□□ 0.34
COL1A1-205ENST00000476387 IFRD2Q12894 506 aaPredicted RBP17.15■□□□□ 0.34
COL1A1-205ENST00000476387 RSPO4Q2I0M5 234 aaPredicted RBP17.15■□□□□ 0.34
COL1A1-205ENST00000476387 CBWD6Q4V339 395 aa17.15■□□□□ 0.34
COL1A1-205ENST00000476387 CBWD3Q5JTY5 395 aa17.15■□□□□ 0.34
COL1A1-205ENST00000476387 CBWD5Q5RIA9 395 aa17.15■□□□□ 0.34
COL1A1-205ENST00000476387 HEATR6Q6AI08 1181 aaKnown RBP17.15■□□□□ 0.34
COL1A1-205ENST00000476387 PKN3Q6P5Z2 889 aa17.15■□□□□ 0.34
COL1A1-205ENST00000476387 FILIP1Q7Z7B0 1213 aa17.15■□□□□ 0.34
COL1A1-205ENST00000476387 CRYBG2Q8N1P7 616 aa17.15■□□□□ 0.34
COL1A1-205ENST00000476387 TTC39CQ8N584 583 aa17.15■□□□□ 0.34
COL1A1-205ENST00000476387 SEMA4DQ92854 862 aa17.15■□□□□ 0.34
COL1A1-205ENST00000476387 SLC35C1Q96A29 364 aa17.15■□□□□ 0.34
COL1A1-205ENST00000476387 FAXDC2Q96IV6 333 aa17.15■□□□□ 0.34
COL1A1-205ENST00000476387 SLITRK1Q96PX8 696 aa17.15■□□□□ 0.34
COL1A1-205ENST00000476387 DUSP9Q99956 384 aaKnown RBP17.15■□□□□ 0.34
COL1A1-205ENST00000476387 FAM49BQ9NUQ9 324 aa17.15■□□□□ 0.34
COL1A1-205ENST00000476387 TMEM30AQ9NV96 361 aa17.15■□□□□ 0.34
COL1A1-205ENST00000476387 SLC8A2Q9UPR5 921 aa17.15■□□□□ 0.34
COL1A1-205ENST00000476387 RNF40O75150 1001 aa17.14■□□□□ 0.33
COL1A1-205ENST00000476387 NFATC1O95644 943 aa17.14■□□□□ 0.33
COL1A1-205ENST00000476387 OAS1P00973 400 aaKnown RBP17.14■□□□□ 0.33
COL1A1-205ENST00000476387 STX17P56962 302 aa17.14■□□□□ 0.33
COL1A1-205ENST00000476387 LPAL2Q16609 132 aa17.14■□□□□ 0.33
COL1A1-205ENST00000476387 FUKQ8N0W3 1084 aa17.14■□□□□ 0.33
COL1A1-205ENST00000476387 NUP93Q8N1F7 819 aa17.14■□□□□ 0.33
COL1A1-205ENST00000476387 TTC16Q8NEE8 873 aa17.14■□□□□ 0.33
COL1A1-205ENST00000476387 CCDC26Q8TAB7 109 aa17.14■□□□□ 0.33
COL1A1-205ENST00000476387 SLC2A14Q8TDB8 520 aa17.14■□□□□ 0.33
COL1A1-205ENST00000476387 OVCA2Q8WZ82 227 aa17.14■□□□□ 0.33
COL1A1-205ENST00000476387 CD101Q93033 1021 aa17.14■□□□□ 0.33
COL1A1-205ENST00000476387 GBP4Q96PP9 640 aa17.14■□□□□ 0.33
COL1A1-205ENST00000476387 CLSTN2Q9H4D0 955 aa17.14■□□□□ 0.33
COL1A1-205ENST00000476387 FBRSL1Q9HCM7 1045 aaKnown RBP17.14■□□□□ 0.33
COL1A1-205ENST00000476387 PARD6AQ9NPB6 346 aa17.14■□□□□ 0.33
COL1A1-205ENST00000476387 USP18Q9UMW8 372 aa17.14■□□□□ 0.33
COL1A1-205ENST00000476387 NCOR2Q9Y618 2525 aa17.13■□□□□ 0.33
COL1A1-205ENST00000476387 LEFTY2O00292 366 aa17.13■□□□□ 0.33
COL1A1-205ENST00000476387 CILPO75339 1184 aa17.13■□□□□ 0.33
COL1A1-205ENST00000476387 FGFR1OPO95684 399 aaKnown RBP17.13■□□□□ 0.33
COL1A1-205ENST00000476387 GNA14O95837 355 aa17.13■□□□□ 0.33
COL1A1-205ENST00000476387 FAM200BP0CF97 657 aa17.13■□□□□ 0.33
COL1A1-205ENST00000476387 YWHAQP27348 245 aa17.13■□□□□ 0.33
COL1A1-205ENST00000476387 ZXDBP98169 803 aa17.13■□□□□ 0.33
COL1A1-205ENST00000476387 TAF10Q12962 218 aa17.13■□□□□ 0.33
COL1A1-205ENST00000476387 SRSF5Q13243 272 aaKnown RBP17.13■□□□□ 0.33
COL1A1-205ENST00000476387 ARHGAP30Q7Z6I6 1101 aaPredicted RBP17.13■□□□□ 0.33
COL1A1-205ENST00000476387 DDX42Q86XP3 938 aaKnown RBP eCLIP17.13■□□□□ 0.33
COL1A1-205ENST00000476387 CAMKK1Q8N5S9 505 aa17.13■□□□□ 0.33
COL1A1-205ENST00000476387 C12orf29Q8N999 325 aa17.13■□□□□ 0.33
COL1A1-205ENST00000476387 PDZD8Q8NEN9 1154 aa17.13■□□□□ 0.33
COL1A1-205ENST00000476387 FBXO32Q969P5 355 aa17.13■□□□□ 0.33
COL1A1-205ENST00000476387 TWNKQ96RR1 684 aa17.13■□□□□ 0.33
COL1A1-205ENST00000476387 LINC00597Q9H2U6 94 aa17.13■□□□□ 0.33
Retrieved 100 of 20,778 RNA–protein pairs in 19.6 ms