RNA–Protein interactions for RNA: ENST00000476045.5

VPS13D-206, Transcript of vacuolar protein sorting 13 homolog D, humanhuman

TSL 5

Gene VPS13D, Length 380 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13D-206ENST00000476045 U2AF2P26368 475 aaKnown RBP eCLIP4.61□□□□□ -1.67
VPS13D-206ENST00000476045 YWHABP31946 246 aaKnown RBP4.61□□□□□ -1.67
VPS13D-206ENST00000476045 TRAPPC10P48553 1259 aa4.61□□□□□ -1.67
VPS13D-206ENST00000476045 GATMP50440 423 aa4.61□□□□□ -1.67
VPS13D-206ENST00000476045 ERVFRD-1P60508 538 aa4.61□□□□□ -1.67
VPS13D-206ENST00000476045 RNASELQ05823 741 aaKnown RBP4.61□□□□□ -1.67
VPS13D-206ENST00000476045 NCBP1Q09161 790 aaKnown RBP4.61□□□□□ -1.67
VPS13D-206ENST00000476045 AUHQ13825 339 aaKnown RBP4.61□□□□□ -1.67
VPS13D-206ENST00000476045 KCNC3Q14003 757 aa4.61□□□□□ -1.67
VPS13D-206ENST00000476045 EPHA7Q15375 998 aa4.61□□□□□ -1.67
VPS13D-206ENST00000476045 SAFBQ15424 915 aaKnown RBP eCLIP4.61□□□□□ -1.67
VPS13D-206ENST00000476045 CALCRLQ16602 461 aa4.61□□□□□ -1.67
VPS13D-206ENST00000476045 PTPN21Q16825 1174 aa4.61□□□□□ -1.67
VPS13D-206ENST00000476045 DPCR1Q3MIW9 517 aa4.61□□□□□ -1.67
VPS13D-206ENST00000476045 NOMO2Q5JPE7 1267 aa4.61□□□□□ -1.67
VPS13D-206ENST00000476045 KIAA1841Q6NSI8 718 aa4.61□□□□□ -1.67
VPS13D-206ENST00000476045 ANKRD54Q6NXT1 300 aa4.61□□□□□ -1.67
VPS13D-206ENST00000476045 SARM1Q6SZW1 724 aa4.61□□□□□ -1.67
VPS13D-206ENST00000476045 PIK3AP1Q6ZUJ8 805 aa4.61□□□□□ -1.67
VPS13D-206ENST00000476045 ANO5Q75V66 913 aa4.61□□□□□ -1.67
VPS13D-206ENST00000476045 BRAPQ7Z569 592 aa4.61□□□□□ -1.67
VPS13D-206ENST00000476045 APBB1IPQ7Z5R6 666 aaPredicted RBP4.61□□□□□ -1.67
VPS13D-206ENST00000476045 ADGRD2Q7Z7M1 963 aa4.61□□□□□ -1.67
VPS13D-206ENST00000476045 DDX53Q86TM3 631 aaKnown RBP4.61□□□□□ -1.67
VPS13D-206ENST00000476045 NOP9Q86U38 636 aaKnown RBP4.61□□□□□ -1.67
VPS13D-206ENST00000476045 SLCO6A1Q86UG4 719 aa4.61□□□□□ -1.67
VPS13D-206ENST00000476045 LSRQ86X29 649 aaPredicted RBP4.61□□□□□ -1.67
VPS13D-206ENST00000476045 RHPN2Q8IUC4 686 aa4.61□□□□□ -1.67
VPS13D-206ENST00000476045 LRRC8AQ8IWT6 810 aa4.61□□□□□ -1.67
VPS13D-206ENST00000476045 UBALD2Q8IYN6 164 aa4.61□□□□□ -1.67
VPS13D-206ENST00000476045 TDRD5Q8NAT2 981 aaKnown RBP4.61□□□□□ -1.67
VPS13D-206ENST00000476045 CCDC112Q8NEF3 446 aa4.61□□□□□ -1.67
VPS13D-206ENST00000476045 CMASQ8NFW8 434 aaPredicted RBP4.61□□□□□ -1.67
VPS13D-206ENST00000476045 FBXO18Q8NFZ0 1043 aa4.61□□□□□ -1.67
VPS13D-206ENST00000476045 ERMNQ8TAM6 284 aa4.61□□□□□ -1.67
VPS13D-206ENST00000476045 KCNG4Q8TDN1 519 aa4.61□□□□□ -1.67
VPS13D-206ENST00000476045 MICAL1Q8TDZ2 1067 aa4.61□□□□□ -1.67
VPS13D-206ENST00000476045 EDAQ92838 391 aa4.61□□□□□ -1.67
VPS13D-206ENST00000476045 MRFAP1L1Q96HT8 127 aa4.61□□□□□ -1.67
VPS13D-206ENST00000476045 CEP170P1Q96L14 293 aa4.61□□□□□ -1.67
VPS13D-206ENST00000476045 NLRP4Q96MN2 994 aa4.61□□□□□ -1.67
VPS13D-206ENST00000476045 CEP89Q96ST8 783 aa4.61□□□□□ -1.67
VPS13D-206ENST00000476045 HERC2P3Q9BVR0 1158 aa4.61□□□□□ -1.67
VPS13D-206ENST00000476045 RAB34Q9BZG1 259 aa4.61□□□□□ -1.67
VPS13D-206ENST00000476045 NAT10Q9H0A0 1025 aaKnown RBP4.61□□□□□ -1.67
VPS13D-206ENST00000476045 C2orf40Q9H1Z8 148 aa4.61□□□□□ -1.67
VPS13D-206ENST00000476045 RSAD1Q9HA92 442 aa4.61□□□□□ -1.67
VPS13D-206ENST00000476045 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP4.61□□□□□ -1.67
VPS13D-206ENST00000476045 ANKEF1Q9NU02 776 aa4.61□□□□□ -1.67
VPS13D-206ENST00000476045 TBC1D13Q9NVG8 400 aa4.61□□□□□ -1.67
VPS13D-206ENST00000476045 ERVK13-1Q9NX77 482 aa4.61□□□□□ -1.67
VPS13D-206ENST00000476045 CLEC1BQ9P126 229 aa4.61□□□□□ -1.67
VPS13D-206ENST00000476045 TNFRSF10DQ9UBN6 386 aa4.61□□□□□ -1.67
VPS13D-206ENST00000476045 NOL12Q9UGY1 213 aaKnown RBP eCLIP4.61□□□□□ -1.67
VPS13D-206ENST00000476045 RAPGEFL1Q9UHV5 662 aa4.61□□□□□ -1.67
VPS13D-206ENST00000476045 BARX2Q9UMQ3 279 aaPredicted RBP4.61□□□□□ -1.67
VPS13D-206ENST00000476045 V9GYY5 206 aaPredicted RBP4.61□□□□□ -1.67
VPS13D-206ENST00000476045 TCHHQ07283 1943 aa4.6□□□□□ -1.67
VPS13D-206ENST00000476045 FRYLO94915 3013 aa4.6□□□□□ -1.67
VPS13D-206ENST00000476045 A0A087WZ62 844 aa4.6□□□□□ -1.67
VPS13D-206ENST00000476045 TEX51A0A1B0GUA7 166 aa4.6□□□□□ -1.67
VPS13D-206ENST00000476045 FAM86C2PA6NEL3 165 aa4.6□□□□□ -1.67
VPS13D-206ENST00000476045 TMEM221A6NGB7 291 aa4.6□□□□□ -1.67
VPS13D-206ENST00000476045 C2orf71A6NGG8 1288 aa4.6□□□□□ -1.67
VPS13D-206ENST00000476045 M0R296 226 aa4.6□□□□□ -1.67
VPS13D-206ENST00000476045 ETV2O00321 342 aaPredicted RBP4.6□□□□□ -1.67
VPS13D-206ENST00000476045 SYPP08247 313 aa4.6□□□□□ -1.67
VPS13D-206ENST00000476045 IBSPP21815 317 aaPredicted RBP4.6□□□□□ -1.67
VPS13D-206ENST00000476045 GUCY2CP25092 1073 aa4.6□□□□□ -1.67
VPS13D-206ENST00000476045 TECP42680 631 aa4.6□□□□□ -1.67
VPS13D-206ENST00000476045 BCAR1P56945 870 aa4.6□□□□□ -1.67
VPS13D-206ENST00000476045 PTENP60484 403 aa4.6□□□□□ -1.67
VPS13D-206ENST00000476045 YBX1P67809 324 aaKnown RBP4.6□□□□□ -1.67
VPS13D-206ENST00000476045 TPM4P67936 248 aa4.6□□□□□ -1.67
VPS13D-206ENST00000476045 CCZ1BP86790 482 aa4.6□□□□□ -1.67
VPS13D-206ENST00000476045 CCZ1P86791 482 aaPredicted RBP4.6□□□□□ -1.67
VPS13D-206ENST00000476045 DLX2Q07687 328 aaPredicted RBP4.6□□□□□ -1.67
VPS13D-206ENST00000476045 SPIRE1Q08AE8 756 aa4.6□□□□□ -1.67
VPS13D-206ENST00000476045 GOLGA8FQ08AF8 430 aa4.6□□□□□ -1.67
VPS13D-206ENST00000476045 GOLGA8DPQ0D2H9 430 aa4.6□□□□□ -1.67
VPS13D-206ENST00000476045 LAMTOR4Q0VGL1 99 aa4.6□□□□□ -1.67
VPS13D-206ENST00000476045 ELAVL2Q12926 359 aaKnown RBP4.6□□□□□ -1.67
VPS13D-206ENST00000476045 GRIK3Q13003 919 aa4.6□□□□□ -1.67
VPS13D-206ENST00000476045 PPP2R5AQ15172 486 aa4.6□□□□□ -1.67
VPS13D-206ENST00000476045 PTPN14Q15678 1187 aa4.6□□□□□ -1.67
VPS13D-206ENST00000476045 CLUL1Q15846 466 aa4.6□□□□□ -1.67
VPS13D-206ENST00000476045 RTP2Q5QGT7 225 aa4.6□□□□□ -1.67
VPS13D-206ENST00000476045 AXDND1Q5T1B0 1012 aaPredicted RBP4.6□□□□□ -1.67
VPS13D-206ENST00000476045 FAM102BQ5T8I3 360 aa4.6□□□□□ -1.67
VPS13D-206ENST00000476045 PLA2G4FQ68DD2 849 aa4.6□□□□□ -1.67
VPS13D-206ENST00000476045 CDCA2Q69YH5 1023 aaPredicted RBP4.6□□□□□ -1.67
VPS13D-206ENST00000476045 ADALQ6DHV7 355 aa4.6□□□□□ -1.67
VPS13D-206ENST00000476045 NCAPH2Q6IBW4 605 aa4.6□□□□□ -1.67
VPS13D-206ENST00000476045 PDXDC1Q6P996 788 aa4.6□□□□□ -1.67
VPS13D-206ENST00000476045 C15orf39Q6ZRI6 1047 aa4.6□□□□□ -1.67
VPS13D-206ENST00000476045 LCNL1Q6ZST4 164 aa4.6□□□□□ -1.67
VPS13D-206ENST00000476045 CCDC149Q6ZUS6 474 aa4.6□□□□□ -1.67
VPS13D-206ENST00000476045 ZBTB8OSQ8IWT0 167 aa4.6□□□□□ -1.67
VPS13D-206ENST00000476045 DIS3L2Q8IYB7 885 aaKnown RBP4.6□□□□□ -1.67
VPS13D-206ENST00000476045 LRRC56Q8IYG6 542 aaPredicted RBP4.6□□□□□ -1.67
Retrieved 100 of 20,778 RNA–protein pairs in 59 ms