RNA–Protein interactions for RNA: ENST00000475549.1

HDAC3-207, Transcript of histone deacetylase 3, humanhuman

TSL 2

Gene HDAC3, Length 297 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC3-207ENST00000475549 RTKNQ9BST9 563 aa7.46□□□□□ -1.22
HDAC3-207ENST00000475549 ELOVL4Q9GZR5 314 aa7.46□□□□□ -1.22
HDAC3-207ENST00000475549 DUSP15Q9H1R2 295 aaPredicted RBP7.46□□□□□ -1.22
HDAC3-207ENST00000475549 GOLPH3LQ9H4A5 285 aa7.46□□□□□ -1.22
HDAC3-207ENST00000475549 CCSER2Q9H7U1 834 aa7.46□□□□□ -1.22
HDAC3-207ENST00000475549 APOBEC3GQ9HC16 384 aaKnown RBP7.46□□□□□ -1.22
HDAC3-207ENST00000475549 CSNK1G1Q9HCP0 422 aa7.46□□□□□ -1.22
HDAC3-207ENST00000475549 UTP3Q9NQZ2 479 aaKnown RBP eCLIP7.46□□□□□ -1.22
HDAC3-207ENST00000475549 OSER1Q9NX31 292 aa7.46□□□□□ -1.22
HDAC3-207ENST00000475549 CFAP97Q9P2B7 532 aa7.46□□□□□ -1.22
HDAC3-207ENST00000475549 EBF1Q9UH73 591 aa7.46□□□□□ -1.22
HDAC3-207ENST00000475549 CDV3Q9UKY7 258 aaKnown RBP7.46□□□□□ -1.22
HDAC3-207ENST00000475549 CIZ1Q9ULV3 898 aaPredicted RBP7.46□□□□□ -1.22
HDAC3-207ENST00000475549 SLC8A2Q9UPR5 921 aa7.46□□□□□ -1.22
HDAC3-207ENST00000475549 MAPK8IP1Q9UQF2 711 aa7.46□□□□□ -1.22
HDAC3-207ENST00000475549 INVSQ9Y283 1065 aa7.46□□□□□ -1.22
HDAC3-207ENST00000475549 MIA3Q5JRA6 1907 aa7.45□□□□□ -1.22
HDAC3-207ENST00000475549 HHLA1C9JL84 531 aa7.45□□□□□ -1.22
HDAC3-207ENST00000475549 HAX1O00165 279 aa7.45□□□□□ -1.22
HDAC3-207ENST00000475549 IKBKBO14920 756 aa7.45□□□□□ -1.22
HDAC3-207ENST00000475549 TRIM24O15164 1050 aa7.45□□□□□ -1.22
HDAC3-207ENST00000475549 AKAP3O75969 853 aa7.45□□□□□ -1.22
HDAC3-207ENST00000475549 EPN2O95208 641 aa7.45□□□□□ -1.22
HDAC3-207ENST00000475549 NFATC1O95644 943 aa7.45□□□□□ -1.22
HDAC3-207ENST00000475549 ASS1P00966 412 aaKnown RBP7.45□□□□□ -1.22
HDAC3-207ENST00000475549 RPN1P04843 607 aaKnown RBP7.45□□□□□ -1.22
HDAC3-207ENST00000475549 HSP90AA1P07900 732 aaKnown RBP7.45□□□□□ -1.22
HDAC3-207ENST00000475549 SDHBP21912 280 aa7.45□□□□□ -1.22
HDAC3-207ENST00000475549 KIR2DL1P43626 348 aaPredicted RBP7.45□□□□□ -1.22
HDAC3-207ENST00000475549 PDE6CP51160 858 aa7.45□□□□□ -1.22
HDAC3-207ENST00000475549 NDST1P52848 882 aa7.45□□□□□ -1.22
HDAC3-207ENST00000475549 AP3M2P53677 418 aa7.45□□□□□ -1.22
HDAC3-207ENST00000475549 SLC5A3P53794 718 aa7.45□□□□□ -1.22
HDAC3-207ENST00000475549 SEC13P55735 322 aa7.45□□□□□ -1.22
HDAC3-207ENST00000475549 DPYDQ12882 1025 aa7.45□□□□□ -1.22
HDAC3-207ENST00000475549 SGSM1Q2NKQ1 1148 aa7.45□□□□□ -1.22
HDAC3-207ENST00000475549 ZNF699Q32M78 642 aa7.45□□□□□ -1.22
HDAC3-207ENST00000475549 ZNF667Q5HYK9 610 aa7.45□□□□□ -1.22
HDAC3-207ENST00000475549 LY6G5CQ5SRR4 150 aa7.45□□□□□ -1.22
HDAC3-207ENST00000475549 TCEAL6Q6IPX3 200 aa7.45□□□□□ -1.22
HDAC3-207ENST00000475549 SCARA5Q6ZMJ2 495 aa7.45□□□□□ -1.22
HDAC3-207ENST00000475549 GPRIN1Q7Z2K8 1008 aa7.45□□□□□ -1.22
HDAC3-207ENST00000475549 CACNA2D4Q7Z3S7 1137 aa7.45□□□□□ -1.22
HDAC3-207ENST00000475549 FAM35AQ86V20 835 aa7.45□□□□□ -1.22
HDAC3-207ENST00000475549 RASSF3Q86WH2 238 aa7.45□□□□□ -1.22
HDAC3-207ENST00000475549 CCDC33Q8N5R6 958 aa7.45□□□□□ -1.22
HDAC3-207ENST00000475549 ALLCQ8N6M5 410 aa7.45□□□□□ -1.22
HDAC3-207ENST00000475549 FRMD1Q8N878 549 aa7.45□□□□□ -1.22
HDAC3-207ENST00000475549 IL17RCQ8NAC3 791 aa7.45□□□□□ -1.22
HDAC3-207ENST00000475549 SLC2A14Q8TDB8 520 aa7.45□□□□□ -1.22
HDAC3-207ENST00000475549 NETO1Q8TDF5 533 aa7.45□□□□□ -1.22
HDAC3-207ENST00000475549 TMC2Q8TDI7 906 aa7.45□□□□□ -1.22
HDAC3-207ENST00000475549 TCEAL3Q969E4 200 aa7.45□□□□□ -1.22
HDAC3-207ENST00000475549 FBXO32Q969P5 355 aa7.45□□□□□ -1.22
HDAC3-207ENST00000475549 LOXL4Q96JB6 756 aa7.45□□□□□ -1.22
HDAC3-207ENST00000475549 SLITRK1Q96PX8 696 aa7.45□□□□□ -1.22
HDAC3-207ENST00000475549 ZDHHC4Q9NPG8 344 aa7.45□□□□□ -1.22
HDAC3-207ENST00000475549 EXOC1Q9NV70 894 aa7.45□□□□□ -1.22
HDAC3-207ENST00000475549 GMIPQ9P107 970 aa7.45□□□□□ -1.22
HDAC3-207ENST00000475549 TRAF3IP3Q9Y228 551 aa7.45□□□□□ -1.22
HDAC3-207ENST00000475549 SPTBN2O15020 2390 aa7.45□□□□□ -1.22
HDAC3-207ENST00000475549 SGK1O00141 431 aa7.44□□□□□ -1.22
HDAC3-207ENST00000475549 ADAM23O75077 832 aa7.44□□□□□ -1.22
HDAC3-207ENST00000475549 AP1G2O75843 785 aa7.44□□□□□ -1.22
HDAC3-207ENST00000475549 RHOBTB3O94955 611 aa7.44□□□□□ -1.22
HDAC3-207ENST00000475549 KAT7O95251 611 aa7.44□□□□□ -1.22
HDAC3-207ENST00000475549 APBB3O95704 486 aa7.44□□□□□ -1.22
HDAC3-207ENST00000475549 HLA-DRAP01903 254 aa7.44□□□□□ -1.22
HDAC3-207ENST00000475549 TRIM49P0CI25 452 aa7.44□□□□□ -1.22
HDAC3-207ENST00000475549 TRIM49CP0CI26 452 aa7.44□□□□□ -1.22
HDAC3-207ENST00000475549 CCDC192P0DO97 292 aa7.44□□□□□ -1.22
HDAC3-207ENST00000475549 MBL2P11226 248 aaPredicted RBP7.44□□□□□ -1.22
HDAC3-207ENST00000475549 BCKDHBP21953 392 aa7.44□□□□□ -1.22
HDAC3-207ENST00000475549 GCLMP48507 274 aa7.44□□□□□ -1.22
HDAC3-207ENST00000475549 VAMP7P51809 220 aa7.44□□□□□ -1.22
HDAC3-207ENST00000475549 MAP3K7CLP57077 242 aa7.44□□□□□ -1.22
HDAC3-207ENST00000475549 NR1H3Q13133 447 aa7.44□□□□□ -1.22
HDAC3-207ENST00000475549 CRY1Q16526 586 aa7.44□□□□□ -1.22
HDAC3-207ENST00000475549 ZCWPW2Q504Y3 356 aa7.44□□□□□ -1.22
HDAC3-207ENST00000475549 HECTD3Q5T447 861 aa7.44□□□□□ -1.22
HDAC3-207ENST00000475549 CEP135Q66GS9 1140 aa7.44□□□□□ -1.22
HDAC3-207ENST00000475549 KRBA2Q6ZNG9 492 aa7.44□□□□□ -1.22
HDAC3-207ENST00000475549 TMEM25Q86YD3 366 aa7.44□□□□□ -1.22
HDAC3-207ENST00000475549 MIB1Q86YT6 1006 aa7.44□□□□□ -1.22
HDAC3-207ENST00000475549 BBS7Q8IWZ6 715 aa7.44□□□□□ -1.22
HDAC3-207ENST00000475549 ETFBKMTQ8IXQ9 262 aa7.44□□□□□ -1.22
HDAC3-207ENST00000475549 SMYD4Q8IYR2 804 aaPredicted RBP7.44□□□□□ -1.22
HDAC3-207ENST00000475549 TXNDC5Q8NBS9 432 aaKnown RBP7.44□□□□□ -1.22
HDAC3-207ENST00000475549 MDGA1Q8NFP4 955 aa7.44□□□□□ -1.22
HDAC3-207ENST00000475549 TAS1R2Q8TE23 839 aa7.44□□□□□ -1.22
HDAC3-207ENST00000475549 OVCA2Q8WZ82 227 aa7.44□□□□□ -1.22
HDAC3-207ENST00000475549 SEMA4DQ92854 862 aa7.44□□□□□ -1.22
HDAC3-207ENST00000475549 EEF2KMTQ96G04 330 aa7.44□□□□□ -1.22
HDAC3-207ENST00000475549 SMARCD1Q96GM5 515 aa7.44□□□□□ -1.22
HDAC3-207ENST00000475549 SPATA32Q96LK8 384 aa7.44□□□□□ -1.22
HDAC3-207ENST00000475549 CNTNAP3BQ96NU0 1288 aa7.44□□□□□ -1.22
HDAC3-207ENST00000475549 PNKPQ96T60 521 aa7.44□□□□□ -1.22
HDAC3-207ENST00000475549 KLF16Q9BXK1 252 aaPredicted RBP7.44□□□□□ -1.22
HDAC3-207ENST00000475549 CNTNAP3Q9BZ76 1288 aa7.44□□□□□ -1.22
HDAC3-207ENST00000475549 NMUR1Q9HB89 426 aa7.44□□□□□ -1.22
Retrieved 100 of 20,778 RNA–protein pairs in 45.3 ms