RNA–Protein interactions for RNA: ENST00000475329.5

TRAF4-210, Transcript of TNF receptor associated factor 4, humanhuman

TSL 3

Gene TRAF4, Length 544 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF4-210ENST00000475329 ULBP1Q9BZM6 244 aa14.39□□□□□ -0.11
TRAF4-210ENST00000475329 ANKZF1Q9H8Y5 726 aa14.39□□□□□ -0.11
TRAF4-210ENST00000475329 ZWILCHQ9H900 591 aa14.39□□□□□ -0.11
TRAF4-210ENST00000475329 CNGB3Q9NQW8 809 aa14.39□□□□□ -0.11
TRAF4-210ENST00000475329 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP14.39□□□□□ -0.11
TRAF4-210ENST00000475329 MTUS1Q9ULD2 1270 aa14.39□□□□□ -0.11
TRAF4-210ENST00000475329 PCDHB5Q9Y5E4 795 aa14.39□□□□□ -0.11
TRAF4-210ENST00000475329 TUBBP07437 444 aa14.38□□□□□ -0.11
TRAF4-210ENST00000475329 LAG3P18627 525 aa14.38□□□□□ -0.11
TRAF4-210ENST00000475329 MIPP30301 263 aa14.38□□□□□ -0.11
TRAF4-210ENST00000475329 DAOAP59103 153 aa14.38□□□□□ -0.11
TRAF4-210ENST00000475329 COPS2P61201 443 aa14.38□□□□□ -0.11
TRAF4-210ENST00000475329 FPGSQ05932 587 aa14.38□□□□□ -0.11
TRAF4-210ENST00000475329 BTG3Q14201 252 aaPredicted RBP14.38□□□□□ -0.11
TRAF4-210ENST00000475329 CDO1Q16878 200 aa14.38□□□□□ -0.11
TRAF4-210ENST00000475329 C15orf59Q2T9L4 293 aaPredicted RBP14.38□□□□□ -0.11
TRAF4-210ENST00000475329 GLE1Q53GS7 698 aaKnown RBP14.38□□□□□ -0.11
TRAF4-210ENST00000475329 FAM117BQ6P1L5 589 aa14.38□□□□□ -0.11
TRAF4-210ENST00000475329 KCNT2Q6UVM3 1135 aa14.38□□□□□ -0.11
TRAF4-210ENST00000475329 GPRIN1Q7Z2K8 1008 aa14.38□□□□□ -0.11
TRAF4-210ENST00000475329 KLHL7Q8IXQ5 586 aa14.38□□□□□ -0.11
TRAF4-210ENST00000475329 SCML4Q8N228 414 aa14.38□□□□□ -0.11
TRAF4-210ENST00000475329 ARFGAP1Q8N6T3 406 aa14.38□□□□□ -0.11
TRAF4-210ENST00000475329 IRGQQ8WZA9 623 aa14.38□□□□□ -0.11
TRAF4-210ENST00000475329 RUBCNQ92622 972 aa14.38□□□□□ -0.11
TRAF4-210ENST00000475329 IGSF21Q96ID5 467 aa14.38□□□□□ -0.11
TRAF4-210ENST00000475329 B3GALT6Q96L58 329 aa14.38□□□□□ -0.11
TRAF4-210ENST00000475329 CFAP57Q96MR6 1250 aa14.38□□□□□ -0.11
TRAF4-210ENST00000475329 DDX23Q9BUQ8 820 aaKnown RBP14.38□□□□□ -0.11
TRAF4-210ENST00000475329 EPC1Q9H2F5 836 aa14.38□□□□□ -0.11
TRAF4-210ENST00000475329 SLITRK6Q9H5Y7 841 aa14.38□□□□□ -0.11
TRAF4-210ENST00000475329 NGRNQ9NPE2 291 aaKnown RBP14.38□□□□□ -0.11
TRAF4-210ENST00000475329 KLHL11Q9NVR0 708 aa14.38□□□□□ -0.11
TRAF4-210ENST00000475329 ABI2Q9NYB9 513 aaPredicted RBP14.38□□□□□ -0.11
TRAF4-210ENST00000475329 USP18Q9UMW8 372 aa14.38□□□□□ -0.11
TRAF4-210ENST00000475329 LRRD1A4D1F6 860 aa14.37□□□□□ -0.11
TRAF4-210ENST00000475329 ZBBXA8MT70 800 aa14.37□□□□□ -0.11
TRAF4-210ENST00000475329 FSCN2O14926 492 aa14.37□□□□□ -0.11
TRAF4-210ENST00000475329 PRPSAP2O60256 369 aa14.37□□□□□ -0.11
TRAF4-210ENST00000475329 PHF2O75151 1096 aa14.37□□□□□ -0.11
TRAF4-210ENST00000475329 TRUB2O95900 331 aaKnown RBP14.37□□□□□ -0.11
TRAF4-210ENST00000475329 EFEMP2O95967 443 aa14.37□□□□□ -0.11
TRAF4-210ENST00000475329 ZBED1O96006 694 aa14.37□□□□□ -0.11
TRAF4-210ENST00000475329 FGBP02675 491 aa14.37□□□□□ -0.11
TRAF4-210ENST00000475329 CPB1P15086 417 aa14.37□□□□□ -0.11
TRAF4-210ENST00000475329 MCM3P25205 808 aa14.37□□□□□ -0.11
TRAF4-210ENST00000475329 PTPN7P35236 360 aa14.37□□□□□ -0.11
TRAF4-210ENST00000475329 GRIK1P39086 918 aa14.37□□□□□ -0.11
TRAF4-210ENST00000475329 MATKP42679 507 aa14.37□□□□□ -0.11
TRAF4-210ENST00000475329 MAGEA11P43364 429 aa14.37□□□□□ -0.11
TRAF4-210ENST00000475329 NDUFV1P49821 464 aa14.37□□□□□ -0.11
TRAF4-210ENST00000475329 RABGGTBP53611 331 aa14.37□□□□□ -0.11
TRAF4-210ENST00000475329 YWHAZP63104 245 aaKnown RBP14.37□□□□□ -0.11
TRAF4-210ENST00000475329 ATP11AP98196 1134 aa14.37□□□□□ -0.11
TRAF4-210ENST00000475329 SMARCB1Q12824 385 aa14.37□□□□□ -0.11
TRAF4-210ENST00000475329 USP41Q3LFD5 358 aa14.37□□□□□ -0.11
TRAF4-210ENST00000475329 RTP2Q5QGT7 225 aa14.37□□□□□ -0.11
TRAF4-210ENST00000475329 VSTM1Q6UX27 236 aa14.37□□□□□ -0.11
TRAF4-210ENST00000475329 SPOCD1Q6ZMY3 1216 aa14.37□□□□□ -0.11
TRAF4-210ENST00000475329 OTOP2Q7RTS6 562 aa14.37□□□□□ -0.11
TRAF4-210ENST00000475329 ADAT2Q7Z6V5 191 aaKnown RBP14.37□□□□□ -0.11
TRAF4-210ENST00000475329 TMCO2Q7Z6W1 182 aaPredicted RBP14.37□□□□□ -0.11
TRAF4-210ENST00000475329 C7orf61Q8IZ16 206 aa14.37□□□□□ -0.11
TRAF4-210ENST00000475329 FAM172AQ8WUF8 416 aa14.37□□□□□ -0.11
TRAF4-210ENST00000475329 BADQ92934 168 aa14.37□□□□□ -0.11
TRAF4-210ENST00000475329 SLITRK1Q96PX8 696 aa14.37□□□□□ -0.11
TRAF4-210ENST00000475329 SLC2A13Q96QE2 648 aa14.37□□□□□ -0.11
TRAF4-210ENST00000475329 YME1L1Q96TA2 773 aa14.37□□□□□ -0.11
TRAF4-210ENST00000475329 LRRC1Q9BTT6 524 aa14.37□□□□□ -0.11
TRAF4-210ENST00000475329 PARD6BQ9BYG5 372 aa14.37□□□□□ -0.11
TRAF4-210ENST00000475329 OSBPL8Q9BZF1 889 aa14.37□□□□□ -0.11
TRAF4-210ENST00000475329 DDX47Q9H0S4 455 aaKnown RBP14.37□□□□□ -0.11
TRAF4-210ENST00000475329 ARGLU1Q9NWB6 273 aaPredicted RBP14.37□□□□□ -0.11
TRAF4-210ENST00000475329 PCSK1NQ9UHG2 260 aa14.37□□□□□ -0.11
TRAF4-210ENST00000475329 STAP1Q9ULZ2 295 aa14.37□□□□□ -0.11
TRAF4-210ENST00000475329 MRPL42Q9Y6G3 142 aaKnown RBP14.37□□□□□ -0.11
TRAF4-210ENST00000475329 PLXNA4Q9HCM2 1894 aa14.36□□□□□ -0.11
TRAF4-210ENST00000475329 PI4K2BG5E9Z4 385 aa14.36□□□□□ -0.11
TRAF4-210ENST00000475329 TRIM66O15016 1216 aa14.36□□□□□ -0.11
TRAF4-210ENST00000475329 TBC1D4O60343 1298 aa14.36□□□□□ -0.11
TRAF4-210ENST00000475329 USP17L7P0C7H9 530 aa14.36□□□□□ -0.11
TRAF4-210ENST00000475329 RALAP11233 206 aa14.36□□□□□ -0.11
TRAF4-210ENST00000475329 CYP2F1P24903 491 aa14.36□□□□□ -0.11
TRAF4-210ENST00000475329 IL1R2P27930 398 aa14.36□□□□□ -0.11
TRAF4-210ENST00000475329 NOS2P35228 1153 aa14.36□□□□□ -0.11
TRAF4-210ENST00000475329 SULT1E1P49888 294 aa14.36□□□□□ -0.11
TRAF4-210ENST00000475329 SMTNL2Q2TAL5 461 aa14.36□□□□□ -0.11
TRAF4-210ENST00000475329 ATP13A4Q4VNC1 1196 aa14.36□□□□□ -0.11
TRAF4-210ENST00000475329 SH3PXD2AQ5TCZ1 1133 aa14.36□□□□□ -0.11
TRAF4-210ENST00000475329 TXNRD3NBQ6F5E7 133 aa14.36□□□□□ -0.11
TRAF4-210ENST00000475329 PSRC1Q6PGN9 363 aaPredicted RBP14.36□□□□□ -0.11
TRAF4-210ENST00000475329 SCN4BQ8IWT1 228 aa14.36□□□□□ -0.11
TRAF4-210ENST00000475329 RNF168Q8IYW5 571 aaPredicted RBP14.36□□□□□ -0.11
TRAF4-210ENST00000475329 DEFB106AQ8N104 65 aa14.36□□□□□ -0.11
TRAF4-210ENST00000475329 SLC39A11Q8N1S5 342 aa14.36□□□□□ -0.11
TRAF4-210ENST00000475329 COLGALT1Q8NBJ5 622 aa14.36□□□□□ -0.11
TRAF4-210ENST00000475329 CCDC26Q8TAB7 109 aa14.36□□□□□ -0.11
TRAF4-210ENST00000475329 C2orf15Q8WU43 125 aaKnown RBP14.36□□□□□ -0.11
TRAF4-210ENST00000475329 TEKT4Q8WW24 435 aa14.36□□□□□ -0.11
TRAF4-210ENST00000475329 NDRG1Q92597 394 aaKnown RBP14.36□□□□□ -0.11
Retrieved 100 of 20,778 RNA–protein pairs in 36.5 ms