RNA–Protein interactions for RNA: ENST00000475213.1

SSR1-205, Transcript of signal sequence receptor subunit 1, humanhuman

TSL 3

Gene SSR1, Length 446 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSR1-205ENST00000475213 SYNPOQ8N3V7 929 aa12.99□□□□□ -0.33
SSR1-205ENST00000475213 SUMF1Q8NBK3 374 aa12.99□□□□□ -0.33
SSR1-205ENST00000475213 ZMIZ2Q8NF64 920 aa12.99□□□□□ -0.33
SSR1-205ENST00000475213 SLC2A14Q8TDB8 520 aa12.99□□□□□ -0.33
SSR1-205ENST00000475213 OVCA2Q8WZ82 227 aa12.99□□□□□ -0.33
SSR1-205ENST00000475213 FBXO32Q969P5 355 aa12.99□□□□□ -0.33
SSR1-205ENST00000475213 TWNKQ96RR1 684 aa12.99□□□□□ -0.33
SSR1-205ENST00000475213 SMOQ99835 787 aa12.99□□□□□ -0.33
SSR1-205ENST00000475213 FAM126AQ9BYI3 521 aaPredicted RBP12.99□□□□□ -0.33
SSR1-205ENST00000475213 LINC00597Q9H2U6 94 aa12.99□□□□□ -0.33
SSR1-205ENST00000475213 CYP3A43Q9HB55 503 aa12.99□□□□□ -0.33
SSR1-205ENST00000475213 KRT82Q9NSB4 513 aa12.99□□□□□ -0.33
SSR1-205ENST00000475213 FAM49BQ9NUQ9 324 aa12.99□□□□□ -0.33
SSR1-205ENST00000475213 IL37Q9NZH6 218 aa12.99□□□□□ -0.33
SSR1-205ENST00000475213 DMXL1Q9Y485 3027 aa12.99□□□□□ -0.33
SSR1-205ENST00000475213 LEFTY2O00292 366 aa12.98□□□□□ -0.33
SSR1-205ENST00000475213 BEST1O76090 585 aa12.98□□□□□ -0.33
SSR1-205ENST00000475213 GJA4P35212 333 aa12.98□□□□□ -0.33
SSR1-205ENST00000475213 PMS1P54277 932 aaKnown RBP12.98□□□□□ -0.33
SSR1-205ENST00000475213 NRLP54845 237 aa12.98□□□□□ -0.33
SSR1-205ENST00000475213 AMPD2Q01433 879 aa12.98□□□□□ -0.33
SSR1-205ENST00000475213 GRSF1Q12849 480 aaKnown RBP eCLIP12.98□□□□□ -0.335e-6■□□□□ 9.3
SSR1-205ENST00000475213 NAIF1Q69YI7 327 aaPredicted RBP12.98□□□□□ -0.33
SSR1-205ENST00000475213 ANKRD40Q6AI12 368 aa12.98□□□□□ -0.33
SSR1-205ENST00000475213 FSTL4Q6MZW2 842 aa12.98□□□□□ -0.33
SSR1-205ENST00000475213 ZC3H3Q8IXZ2 948 aaKnown RBP12.98□□□□□ -0.33
SSR1-205ENST00000475213 ELOA2Q8IYF1 753 aaPredicted RBP12.98□□□□□ -0.33
SSR1-205ENST00000475213 CPA6Q8N4T0 437 aa12.98□□□□□ -0.33
SSR1-205ENST00000475213 CCDC150Q8NCX0 1101 aa12.98□□□□□ -0.33
SSR1-205ENST00000475213 PDZD8Q8NEN9 1154 aa12.98□□□□□ -0.33
SSR1-205ENST00000475213 WHAMMQ8TF30 809 aa12.98□□□□□ -0.33
SSR1-205ENST00000475213 SEMA4DQ92854 862 aa12.98□□□□□ -0.33
SSR1-205ENST00000475213 ATP2A3Q93084 1043 aa12.98□□□□□ -0.33
SSR1-205ENST00000475213 TSG101Q99816 390 aa12.98□□□□□ -0.33
SSR1-205ENST00000475213 NIF3L1Q9GZT8 377 aa12.98□□□□□ -0.33
SSR1-205ENST00000475213 CSNK1G1Q9HCP0 422 aa12.98□□□□□ -0.33
SSR1-205ENST00000475213 C2orf42Q9NWW7 574 aa12.98□□□□□ -0.33
SSR1-205ENST00000475213 CHORDC1Q9UHD1 332 aaPredicted RBP12.98□□□□□ -0.33
SSR1-205ENST00000475213 HOOK1Q9UJC3 728 aaKnown RBP12.98□□□□□ -0.33
SSR1-205ENST00000475213 CPQQ9Y646 472 aa12.98□□□□□ -0.33
SSR1-205ENST00000475213 KIAA1549LQ6ZVL6 1849 aa12.97□□□□□ -0.33
SSR1-205ENST00000475213 FAM92AA1XBS5 289 aa12.97□□□□□ -0.33
SSR1-205ENST00000475213 TRIM49BA6NDI0 452 aa12.97□□□□□ -0.33
SSR1-205ENST00000475213 SLC16A3O15427 465 aaKnown RBP12.97□□□□□ -0.33
SSR1-205ENST00000475213 STX10O60499 249 aa12.97□□□□□ -0.33
SSR1-205ENST00000475213 CILPO75339 1184 aa12.97□□□□□ -0.33
SSR1-205ENST00000475213 PAPSS2O95340 614 aaPredicted RBP12.97□□□□□ -0.33
SSR1-205ENST00000475213 EGFP01133 1207 aa12.97□□□□□ -0.33
SSR1-205ENST00000475213 MBL2P11226 248 aaPredicted RBP12.97□□□□□ -0.33
SSR1-205ENST00000475213 CD58P19256 250 aa12.97□□□□□ -0.33
SSR1-205ENST00000475213 ADORA2BP29275 332 aa12.97□□□□□ -0.33
SSR1-205ENST00000475213 MXI1P50539 228 aa12.97□□□□□ -0.33
SSR1-205ENST00000475213 GALK1P51570 392 aa12.97□□□□□ -0.33
SSR1-205ENST00000475213 MAP3K7CLP57077 242 aa12.97□□□□□ -0.33
SSR1-205ENST00000475213 FKBP3Q00688 224 aaKnown RBP12.97□□□□□ -0.33
SSR1-205ENST00000475213 ARSIQ5FYB1 569 aa12.97□□□□□ -0.33
SSR1-205ENST00000475213 SNX30Q5VWJ9 437 aa12.97□□□□□ -0.33
SSR1-205ENST00000475213 ISM2Q6H9L7 571 aa12.97□□□□□ -0.33
SSR1-205ENST00000475213 FBXL13Q8NEE6 735 aa12.97□□□□□ -0.33
SSR1-205ENST00000475213 HNRNPABQ99729 332 aaKnown RBP12.97□□□□□ -0.33
SSR1-205ENST00000475213 P2RY13Q9BPV8 354 aa12.97□□□□□ -0.33
SSR1-205ENST00000475213 NT5C1AQ9BXI3 368 aa12.97□□□□□ -0.33
SSR1-205ENST00000475213 GTPBP4Q9BZE4 634 aaKnown RBP12.97□□□□□ -0.33
SSR1-205ENST00000475213 EPC1Q9H2F5 836 aa12.97□□□□□ -0.33
SSR1-205ENST00000475213 FBRSL1Q9HCM7 1045 aaKnown RBP12.97□□□□□ -0.33
SSR1-205ENST00000475213 COMMD8Q9NX08 183 aa12.97□□□□□ -0.33
SSR1-205ENST00000475213 RAB20Q9NX57 234 aa12.97□□□□□ -0.33
SSR1-205ENST00000475213 SMPD4Q9NXE4 827 aa12.97□□□□□ -0.33
SSR1-205ENST00000475213 DCHS1Q96JQ0 3298 aa12.96□□□□□ -0.33
SSR1-205ENST00000475213 K7ESF4 209 aa12.96□□□□□ -0.33
SSR1-205ENST00000475213 COCHO43405 550 aa12.96□□□□□ -0.33
SSR1-205ENST00000475213 GADD45BO75293 160 aaPredicted RBP12.96□□□□□ -0.33
SSR1-205ENST00000475213 NFATC1O95644 943 aa12.96□□□□□ -0.33
SSR1-205ENST00000475213 ZDHHC11BP0C7U3 371 aa12.96□□□□□ -0.33
SSR1-205ENST00000475213 FAM200BP0CF97 657 aa12.96□□□□□ -0.33
SSR1-205ENST00000475213 TRIM21P19474 475 aaKnown RBP12.96□□□□□ -0.33
SSR1-205ENST00000475213 DRD1P21728 446 aa12.96□□□□□ -0.33
SSR1-205ENST00000475213 LRRC63Q05C16 580 aa12.96□□□□□ -0.33
SSR1-205ENST00000475213 DMWDQ09019 674 aa12.96□□□□□ -0.33
SSR1-205ENST00000475213 NR1H3Q13133 447 aa12.96□□□□□ -0.33
SSR1-205ENST00000475213 CBWD6Q4V339 395 aa12.96□□□□□ -0.33
SSR1-205ENST00000475213 DCAF17Q5H9S7 520 aaPredicted RBP12.96□□□□□ -0.33
SSR1-205ENST00000475213 CBWD3Q5JTY5 395 aa12.96□□□□□ -0.33
SSR1-205ENST00000475213 CBWD5Q5RIA9 395 aa12.96□□□□□ -0.33
SSR1-205ENST00000475213 HECTD3Q5T447 861 aa12.96□□□□□ -0.33
SSR1-205ENST00000475213 TCERG1LQ5VWI1 586 aa12.96□□□□□ -0.33
SSR1-205ENST00000475213 PKN3Q6P5Z2 889 aa12.96□□□□□ -0.33
SSR1-205ENST00000475213 CLEC20AQ6ZU45 233 aa12.96□□□□□ -0.33
SSR1-205ENST00000475213 FILIP1Q7Z7B0 1213 aa12.96□□□□□ -0.33
SSR1-205ENST00000475213 KIAA1958Q8N8K9 716 aa12.96□□□□□ -0.33
SSR1-205ENST00000475213 RUBCNQ92622 972 aa12.96□□□□□ -0.33
SSR1-205ENST00000475213 CD101Q93033 1021 aa12.96□□□□□ -0.33
SSR1-205ENST00000475213 CYFIP2Q96F07 1278 aa12.96□□□□□ -0.33
SSR1-205ENST00000475213 FAXDC2Q96IV6 333 aa12.96□□□□□ -0.33
SSR1-205ENST00000475213 HINFPQ9BQA5 517 aa12.96□□□□□ -0.33
SSR1-205ENST00000475213 CCSER2Q9H7U1 834 aa12.96□□□□□ -0.33
SSR1-205ENST00000475213 GMIPQ9P107 970 aa12.96□□□□□ -0.33
SSR1-205ENST00000475213 MAN1B1Q9UKM7 699 aa12.96□□□□□ -0.33
SSR1-205ENST00000475213 SPAG17Q6Q759 2223 aa12.96□□□□□ -0.34
SSR1-205ENST00000475213 RALGAPA1Q6GYQ0 2036 aa12.95□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 49.1 ms