RNA–Protein interactions for RNA: ENST00000475049.5

SDHB-204, Transcript of succinate dehydrogenase complex iron sulfur subunit B, humanhuman

TSL 3

Gene SDHB, Length 397 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDHB-204ENST00000475049 VRK3Q8IV63 474 aa4.83□□□□□ -1.64
SDHB-204ENST00000475049 FSTL5Q8N475 847 aaPredicted RBP4.83□□□□□ -1.64
SDHB-204ENST00000475049 LRRC71Q8N4P6 559 aa4.83□□□□□ -1.64
SDHB-204ENST00000475049 MYCT1Q8N699 235 aa4.83□□□□□ -1.64
SDHB-204ENST00000475049 C11orf44Q8N8P7 122 aa4.83□□□□□ -1.64
SDHB-204ENST00000475049 ANKRD42Q8N9B4 389 aa4.83□□□□□ -1.64
SDHB-204ENST00000475049 TRIM63Q969Q1 353 aa4.83□□□□□ -1.64
SDHB-204ENST00000475049 FAM227BQ96M60 508 aa4.83□□□□□ -1.64
SDHB-204ENST00000475049 PRPF18Q99633 342 aaKnown RBP4.83□□□□□ -1.64
SDHB-204ENST00000475049 GDF15Q99988 308 aa4.83□□□□□ -1.64
SDHB-204ENST00000475049 ALG8Q9BVK2 526 aa4.83□□□□□ -1.64
SDHB-204ENST00000475049 CHMP4AQ9BY43 222 aa4.83□□□□□ -1.64
SDHB-204ENST00000475049 KRTAP17-1Q9BYP8 105 aa4.83□□□□□ -1.64
SDHB-204ENST00000475049 INO80BQ9C086 356 aaPredicted RBP4.83□□□□□ -1.64
SDHB-204ENST00000475049 LRIT1Q9P2V4 623 aa4.83□□□□□ -1.64
SDHB-204ENST00000475049 DKK3Q9UBP4 350 aa4.83□□□□□ -1.64
SDHB-204ENST00000475049 DRG1Q9Y295 367 aaKnown RBP4.83□□□□□ -1.64
SDHB-204ENST00000475049 MORC2Q9Y6X9 1032 aaPredicted RBP4.83□□□□□ -1.64
SDHB-204ENST00000475049 LOC102724159A0A0B4J2E5 919 aa4.82□□□□□ -1.64
SDHB-204ENST00000475049 LGALS16A8MUM7 142 aa4.82□□□□□ -1.64
SDHB-204ENST00000475049 MATN3O15232 486 aa4.82□□□□□ -1.64
SDHB-204ENST00000475049 ZSCAN9O15535 394 aaPredicted RBP4.82□□□□□ -1.64
SDHB-204ENST00000475049 NARSO43776 548 aaKnown RBP4.82□□□□□ -1.64
SDHB-204ENST00000475049 ORC4O43929 436 aa4.82□□□□□ -1.64
SDHB-204ENST00000475049 NXPH3O95157 252 aa4.82□□□□□ -1.64
SDHB-204ENST00000475049 LMNAP02545 664 aaKnown RBP4.82□□□□□ -1.64
SDHB-204ENST00000475049 CSTBP04080 98 aaKnown RBP4.82□□□□□ -1.64
SDHB-204ENST00000475049 ZFXP17010 805 aaPredicted RBP4.82□□□□□ -1.64
SDHB-204ENST00000475049 PDIA3P30101 505 aaKnown RBP4.82□□□□□ -1.64
SDHB-204ENST00000475049 HALP42357 657 aa4.82□□□□□ -1.64
SDHB-204ENST00000475049 MRPS35P82673 323 aaKnown RBP4.82□□□□□ -1.64
SDHB-204ENST00000475049 NSUN2Q08J23 767 aaKnown RBP eCLIP4.82□□□□□ -1.64
SDHB-204ENST00000475049 ABHD18Q0P651 414 aa4.82□□□□□ -1.64
SDHB-204ENST00000475049 MPP3Q13368 585 aa4.82□□□□□ -1.64
SDHB-204ENST00000475049 BMPR2Q13873 1038 aa4.82□□□□□ -1.64
SDHB-204ENST00000475049 SPARCL1Q14515 664 aa4.82□□□□□ -1.64
SDHB-204ENST00000475049 PTPRRQ15256 657 aa4.82□□□□□ -1.64
SDHB-204ENST00000475049 PWP2Q15269 919 aaKnown RBP4.82□□□□□ -1.64
SDHB-204ENST00000475049 SLC5A9Q2M3M2 681 aa4.82□□□□□ -1.64
SDHB-204ENST00000475049 PLAC9Q5JTB6 97 aa4.82□□□□□ -1.64
SDHB-204ENST00000475049 IGFL4Q6B9Z1 124 aa4.82□□□□□ -1.64
SDHB-204ENST00000475049 ABHD5Q8WTS1 349 aa4.82□□□□□ -1.64
SDHB-204ENST00000475049 NEU4Q8WWR8 484 aaPredicted RBP4.82□□□□□ -1.64
SDHB-204ENST00000475049 RMDN3Q96TC7 470 aa4.82□□□□□ -1.64
SDHB-204ENST00000475049 VN1R3Q9BXE9 311 aa4.82□□□□□ -1.64
SDHB-204ENST00000475049 IGSF9Q9P2J2 1179 aa4.82□□□□□ -1.64
SDHB-204ENST00000475049 VWC2LB2RUY7 222 aa4.81□□□□□ -1.64
SDHB-204ENST00000475049 ADM5C9JUS6 153 aa4.81□□□□□ -1.64
SDHB-204ENST00000475049 AGPSO00116 658 aa4.81□□□□□ -1.64
SDHB-204ENST00000475049 EXOC5O00471 708 aa4.81□□□□□ -1.64
SDHB-204ENST00000475049 MPPED1O15442 326 aa4.81□□□□□ -1.64
SDHB-204ENST00000475049 USP1O94782 785 aa4.81□□□□□ -1.64
SDHB-204ENST00000475049 VIPP01282 170 aa4.81□□□□□ -1.64
SDHB-204ENST00000475049 IL6RP08887 468 aaPredicted RBP4.81□□□□□ -1.64
SDHB-204ENST00000475049 MST1P26927 711 aa4.81□□□□□ -1.64
SDHB-204ENST00000475049 RBL1P28749 1068 aa4.81□□□□□ -1.64
SDHB-204ENST00000475049 TXNRD1Q16881 649 aa4.81□□□□□ -1.64
SDHB-204ENST00000475049 NBPF8Q3BBV2 869 aa4.81□□□□□ -1.64
SDHB-204ENST00000475049 TUBB8Q3ZCM7 444 aa4.81□□□□□ -1.64
SDHB-204ENST00000475049 TMTC4Q5T4D3 741 aa4.81□□□□□ -1.64
SDHB-204ENST00000475049 Q6YL49 198 aa4.81□□□□□ -1.64
SDHB-204ENST00000475049 TTC30AQ86WT1 665 aa4.81□□□□□ -1.64
SDHB-204ENST00000475049 GATAD2AQ86YP4 633 aa4.81□□□□□ -1.64
SDHB-204ENST00000475049 RAB11FIP4Q86YS3 637 aa4.81□□□□□ -1.64
SDHB-204ENST00000475049 RASGRP3Q8IV61 690 aa4.81□□□□□ -1.64
SDHB-204ENST00000475049 ACTRT2Q8TDY3 377 aa4.81□□□□□ -1.64
SDHB-204ENST00000475049 ZNF384Q8TF68 577 aa4.81□□□□□ -1.64
SDHB-204ENST00000475049 PBKQ96KB5 322 aa4.81□□□□□ -1.64
SDHB-204ENST00000475049 HERPUD2Q9BSE4 406 aa4.81□□□□□ -1.64
SDHB-204ENST00000475049 PAGR1Q9BTK6 254 aa4.81□□□□□ -1.64
SDHB-204ENST00000475049 EPS8L2Q9H6S3 715 aa4.81□□□□□ -1.64
SDHB-204ENST00000475049 DACT1Q9NYF0 836 aa4.81□□□□□ -1.64
SDHB-204ENST00000475049 HS3ST3A1Q9Y663 406 aa4.81□□□□□ -1.64
SDHB-204ENST00000475049 MAST3O60307 1309 aa4.8□□□□□ -1.64
SDHB-204ENST00000475049 ZAR1LA6NP61 321 aa4.8□□□□□ -1.64
SDHB-204ENST00000475049 TRIM38O00635 465 aa4.8□□□□□ -1.64
SDHB-204ENST00000475049 NPC1O15118 1278 aa4.8□□□□□ -1.64
SDHB-204ENST00000475049 ASNA1O43681 348 aa4.8□□□□□ -1.64
SDHB-204ENST00000475049 URI1O94763 535 aaPredicted RBP4.8□□□□□ -1.64
SDHB-204ENST00000475049 TNFRSF6BO95407 300 aa4.8□□□□□ -1.64
SDHB-204ENST00000475049 TTLL1O95922 423 aa4.8□□□□□ -1.64
SDHB-204ENST00000475049 ONECUT2O95948 504 aa4.8□□□□□ -1.64
SDHB-204ENST00000475049 CD19P15391 556 aa4.8□□□□□ -1.64
SDHB-204ENST00000475049 NDUFB7P17568 137 aa4.8□□□□□ -1.64
SDHB-204ENST00000475049 TPTEP56180 551 aa4.8□□□□□ -1.64
SDHB-204ENST00000475049 TIRAPP58753 221 aa4.8□□□□□ -1.64
SDHB-204ENST00000475049 ZXDAP98168 799 aa4.8□□□□□ -1.64
SDHB-204ENST00000475049 TIAL1Q01085 375 aaKnown RBP eCLIP4.8□□□□□ -1.64
SDHB-204ENST00000475049 TAP1Q03518 808 aa4.8□□□□□ -1.64
SDHB-204ENST00000475049 P3H1Q32P28 736 aa4.8□□□□□ -1.64
SDHB-204ENST00000475049 ABLIM2Q6H8Q1 611 aa4.8□□□□□ -1.64
SDHB-204ENST00000475049 DPY19L3Q6ZPD9 716 aa4.8□□□□□ -1.64
SDHB-204ENST00000475049 PEG10Q86TG7 708 aaKnown RBP4.8□□□□□ -1.64
SDHB-204ENST00000475049 SPATA5Q8NB90 893 aa4.8□□□□□ -1.64
SDHB-204ENST00000475049 MBD3L2Q8NHZ7 208 aaPredicted RBP4.8□□□□□ -1.64
SDHB-204ENST00000475049 FAM71BQ8TC56 605 aa4.8□□□□□ -1.64
SDHB-204ENST00000475049 STYXQ8WUJ0 223 aa4.8□□□□□ -1.64
SDHB-204ENST00000475049 SOCS4Q8WXH5 440 aa4.8□□□□□ -1.64
SDHB-204ENST00000475049 ZDHHC12Q96GR4 267 aa4.8□□□□□ -1.64
SDHB-204ENST00000475049 COQ10AQ96MF6 247 aa4.8□□□□□ -1.64
Retrieved 100 of 20,778 RNA–protein pairs in 24.1 ms