RNA–Protein interactions for RNA: ENST00000474684.1

CPSF7-210, Transcript of cleavage and polyadenylation specific factor 7, humanhuman

TSL 3

Gene CPSF7, Length 635 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF7-210ENST00000474684 IER2Q9BTL4 223 aa6.31□□□□□ -1.4
CPSF7-210ENST00000474684 TTLL2Q9BWV7 592 aa6.31□□□□□ -1.4
CPSF7-210ENST00000474684 B3GNT5Q9BYG0 378 aa6.31□□□□□ -1.4
CPSF7-210ENST00000474684 KCTD10Q9H3F6 313 aa6.31□□□□□ -1.4
CPSF7-210ENST00000474684 ECT2Q9H8V3 914 aa6.31□□□□□ -1.4
CPSF7-210ENST00000474684 GDPD2Q9HCC8 539 aa6.31□□□□□ -1.4
CPSF7-210ENST00000474684 ZDHHC4Q9NPG8 344 aa6.31□□□□□ -1.4
CPSF7-210ENST00000474684 UTP3Q9NQZ2 479 aaKnown RBP eCLIP6.31□□□□□ -1.4
CPSF7-210ENST00000474684 SMPD4Q9NXE4 827 aa6.31□□□□□ -1.4
CPSF7-210ENST00000474684 FAM13BQ9NYF5 915 aa6.31□□□□□ -1.4
CPSF7-210ENST00000474684 DLL3Q9NYJ7 618 aa6.31□□□□□ -1.4
CPSF7-210ENST00000474684 NXF1Q9UBU9 619 aaKnown RBP6.31□□□□□ -1.4
CPSF7-210ENST00000474684 RCOR1Q9UKL0 485 aa6.31□□□□□ -1.4
CPSF7-210ENST00000474684 USP18Q9UMW8 372 aa6.31□□□□□ -1.4
CPSF7-210ENST00000474684 DYNC1LI1Q9Y6G9 523 aaKnown RBP6.31□□□□□ -1.4
CPSF7-210ENST00000474684 PLXNA2O75051 1894 aa6.3□□□□□ -1.4
CPSF7-210ENST00000474684 TRAV19A0A0A6YYK7 116 aa6.3□□□□□ -1.4
CPSF7-210ENST00000474684 PVALEFA0A1B0GWK0 134 aa6.3□□□□□ -1.4
CPSF7-210ENST00000474684 TRDMT1O14717 391 aaKnown RBP6.3□□□□□ -1.4
CPSF7-210ENST00000474684 TACC1O75410 805 aa6.3□□□□□ -1.4
CPSF7-210ENST00000474684 CLSTN1O94985 981 aa6.3□□□□□ -1.4
CPSF7-210ENST00000474684 STAU1O95793 577 aaKnown RBP6.3□□□□□ -1.4
CPSF7-210ENST00000474684 OAS1P00973 400 aaKnown RBP6.3□□□□□ -1.4
CPSF7-210ENST00000474684 C4BPAP04003 597 aaKnown RBP6.3□□□□□ -1.4
CPSF7-210ENST00000474684 NR3C1P04150 777 aa6.3□□□□□ -1.4
CPSF7-210ENST00000474684 CYP17A1P05093 508 aa6.3□□□□□ -1.4
CPSF7-210ENST00000474684 USP17L7P0C7H9 530 aa6.3□□□□□ -1.4
CPSF7-210ENST00000474684 TRIM49P0CI25 452 aa6.3□□□□□ -1.4
CPSF7-210ENST00000474684 TRIM49CP0CI26 452 aa6.3□□□□□ -1.4
CPSF7-210ENST00000474684 HNRNPLP14866 589 aaKnown RBP eCLIP6.3□□□□□ -1.4
CPSF7-210ENST00000474684 PTPN1P18031 435 aaKnown RBP6.3□□□□□ -1.4
CPSF7-210ENST00000474684 GRIK1P39086 918 aa6.3□□□□□ -1.4
CPSF7-210ENST00000474684 OPRD1P41143 372 aa6.3□□□□□ -1.4
CPSF7-210ENST00000474684 ASPAP45381 313 aa6.3□□□□□ -1.4
CPSF7-210ENST00000474684 IFNAR2P48551 515 aa6.3□□□□□ -1.4
CPSF7-210ENST00000474684 PGFP49763 221 aa6.3□□□□□ -1.4
CPSF7-210ENST00000474684 NDUFA8P51970 172 aa6.3□□□□□ -1.4
CPSF7-210ENST00000474684 TNNC1P63316 161 aa6.3□□□□□ -1.4
CPSF7-210ENST00000474684 AMPD3Q01432 767 aa6.3□□□□□ -1.4
CPSF7-210ENST00000474684 TAF10Q12962 218 aa6.3□□□□□ -1.4
CPSF7-210ENST00000474684 NCOA4Q13772 614 aa6.3□□□□□ -1.4
CPSF7-210ENST00000474684 SIM2Q14190 667 aaPredicted RBP6.3□□□□□ -1.4
CPSF7-210ENST00000474684 KCNB1Q14721 858 aa6.3□□□□□ -1.4
CPSF7-210ENST00000474684 DGKKQ5KSL6 1271 aa6.3□□□□□ -1.4
CPSF7-210ENST00000474684 VSTM1Q6UX27 236 aa6.3□□□□□ -1.4
CPSF7-210ENST00000474684 DPH6Q7L8W6 267 aa6.3□□□□□ -1.4
CPSF7-210ENST00000474684 GPRIN1Q7Z2K8 1008 aa6.3□□□□□ -1.4
CPSF7-210ENST00000474684 SMYD4Q8IYR2 804 aaPredicted RBP6.3□□□□□ -1.4
CPSF7-210ENST00000474684 FUKQ8N0W3 1084 aa6.3□□□□□ -1.4
CPSF7-210ENST00000474684 B3GALNT2Q8NCR0 500 aa6.3□□□□□ -1.4
CPSF7-210ENST00000474684 RPLP0P6Q8NHW5 317 aa6.3□□□□□ -1.4
CPSF7-210ENST00000474684 PARD3BQ8TEW8 1205 aa6.3□□□□□ -1.4
CPSF7-210ENST00000474684 OSCP1Q8WVF1 389 aa6.3□□□□□ -1.4
CPSF7-210ENST00000474684 KCNK16Q96T55 309 aa6.3□□□□□ -1.4
CPSF7-210ENST00000474684 P2RY13Q9BPV8 354 aa6.3□□□□□ -1.4
CPSF7-210ENST00000474684 FAM126AQ9BYI3 521 aaPredicted RBP6.3□□□□□ -1.4
CPSF7-210ENST00000474684 LRRC27Q9C0I9 530 aa6.3□□□□□ -1.4
CPSF7-210ENST00000474684 RNF38Q9H0F5 515 aa6.3□□□□□ -1.4
CPSF7-210ENST00000474684 LINC00597Q9H2U6 94 aa6.3□□□□□ -1.4
CPSF7-210ENST00000474684 SMOC1Q9H4F8 434 aa6.3□□□□□ -1.4
CPSF7-210ENST00000474684 ATP13A2Q9NQ11 1180 aa6.3□□□□□ -1.4
CPSF7-210ENST00000474684 KRT82Q9NSB4 513 aa6.3□□□□□ -1.4
CPSF7-210ENST00000474684 RXFP3Q9NSD7 469 aa6.3□□□□□ -1.4
CPSF7-210ENST00000474684 FAM49BQ9NUQ9 324 aa6.3□□□□□ -1.4
CPSF7-210ENST00000474684 EXOC1Q9NV70 894 aa6.3□□□□□ -1.4
CPSF7-210ENST00000474684 DMAC2Q9NW81 257 aa6.3□□□□□ -1.4
CPSF7-210ENST00000474684 DUS2Q9NX74 493 aaKnown RBP6.3□□□□□ -1.4
CPSF7-210ENST00000474684 MAGEC2Q9UBF1 373 aaPredicted RBP6.3□□□□□ -1.4
CPSF7-210ENST00000474684 UXTQ9UBK9 157 aaPredicted RBP6.3□□□□□ -1.4
CPSF7-210ENST00000474684 GMEB2Q9UKD1 530 aa6.3□□□□□ -1.4
CPSF7-210ENST00000474684 ARHGAP26Q9UNA1 814 aa6.3□□□□□ -1.4
CPSF7-210ENST00000474684 MAPK8IP1Q9UQF2 711 aa6.3□□□□□ -1.4
CPSF7-210ENST00000474684 CPQQ9Y646 472 aa6.3□□□□□ -1.4
CPSF7-210ENST00000474684 FRYQ5TBA9 3013 aa6.3□□□□□ -1.4
CPSF7-210ENST00000474684 GOLGA4Q13439 2230 aaKnown RBP6.29□□□□□ -1.4
CPSF7-210ENST00000474684 FAM237AA0A1B0GTK4 181 aa6.29□□□□□ -1.4
CPSF7-210ENST00000474684 ZNF840PA6NDX5 716 aa6.29□□□□□ -1.4
CPSF7-210ENST00000474684 A8MXQ7 604 aa6.29□□□□□ -1.4
CPSF7-210ENST00000474684 LEFTY2O00292 366 aa6.29□□□□□ -1.4
CPSF7-210ENST00000474684 TRIM66O15016 1216 aa6.29□□□□□ -1.4
CPSF7-210ENST00000474684 AKAP3O75969 853 aa6.29□□□□□ -1.4
CPSF7-210ENST00000474684 BEST1O76090 585 aa6.29□□□□□ -1.4
CPSF7-210ENST00000474684 HLA-DRAP01903 254 aa6.29□□□□□ -1.4
CPSF7-210ENST00000474684 RPN1P04843 607 aaKnown RBP6.29□□□□□ -1.4
CPSF7-210ENST00000474684 SLFN14P0C7P3 912 aa6.29□□□□□ -1.4
CPSF7-210ENST00000474684 TCF3P15923 654 aa6.29□□□□□ -1.4
CPSF7-210ENST00000474684 ANXA13P27216 316 aa6.29□□□□□ -1.4
CPSF7-210ENST00000474684 GNL1P36915 607 aaPredicted RBP6.29□□□□□ -1.4
CPSF7-210ENST00000474684 GALK1P51570 392 aa6.29□□□□□ -1.4
CPSF7-210ENST00000474684 SLC5A3P53794 718 aa6.29□□□□□ -1.4
CPSF7-210ENST00000474684 SEC13P55735 322 aa6.29□□□□□ -1.4
CPSF7-210ENST00000474684 NOP14P78316 857 aaKnown RBP6.29□□□□□ -1.4
CPSF7-210ENST00000474684 CLDN10P78369 228 aa6.29□□□□□ -1.4
CPSF7-210ENST00000474684 KDSRQ06136 332 aa6.29□□□□□ -1.4
CPSF7-210ENST00000474684 PPP3CAQ08209 521 aa6.29□□□□□ -1.4
CPSF7-210ENST00000474684 DPYDQ12882 1025 aa6.29□□□□□ -1.4
CPSF7-210ENST00000474684 TRPC3Q13507 836 aa6.29□□□□□ -1.4
CPSF7-210ENST00000474684 PDGFRLQ15198 375 aa6.29□□□□□ -1.4
CPSF7-210ENST00000474684 ZACNQ401N2 412 aa6.29□□□□□ -1.4
CPSF7-210ENST00000474684 ZCWPW2Q504Y3 356 aa6.29□□□□□ -1.4
Retrieved 100 of 20,778 RNA–protein pairs in 33 ms