RNA–Protein interactions for RNA: ENST00000474648.5

COL8A1-206, Transcript of collagen type VIII alpha 1 chain, humanhuman

TSL 5

Gene COL8A1, Length 841 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL8A1-206ENST00000474648 H2AFVQ71UI9 128 aa10.54□□□□□ -0.72
COL8A1-206ENST00000474648 BHLHA9Q7RTU4 235 aa10.54□□□□□ -0.72
COL8A1-206ENST00000474648 DNAJB7Q7Z6W7 309 aaPredicted RBP10.54□□□□□ -0.72
COL8A1-206ENST00000474648 PHLDB2Q86SQ0 1253 aa10.54□□□□□ -0.72
COL8A1-206ENST00000474648 XYLT1Q86Y38 959 aa10.54□□□□□ -0.72
COL8A1-206ENST00000474648 SCUBE3Q8IX30 993 aa10.54□□□□□ -0.72
COL8A1-206ENST00000474648 NUP93Q8N1F7 819 aa10.54□□□□□ -0.72
COL8A1-206ENST00000474648 EFHBQ8N7U6 833 aa10.54□□□□□ -0.72
COL8A1-206ENST00000474648 SLC7A14Q8TBB6 771 aa10.54□□□□□ -0.72
COL8A1-206ENST00000474648 ATRIPQ8WXE1 791 aa10.54□□□□□ -0.72
COL8A1-206ENST00000474648 MCRS1Q96EZ8 462 aa10.54□□□□□ -0.72
COL8A1-206ENST00000474648 NOX5Q96PH1 765 aa10.54□□□□□ -0.72
COL8A1-206ENST00000474648 C11orf70Q9BRQ4 267 aa10.54□□□□□ -0.72
COL8A1-206ENST00000474648 LRRC3Q9BY71 257 aa10.54□□□□□ -0.72
COL8A1-206ENST00000474648 IGFLR1Q9H665 355 aa10.54□□□□□ -0.72
COL8A1-206ENST00000474648 MAN1C1Q9NR34 630 aa10.54□□□□□ -0.72
COL8A1-206ENST00000474648 ST7Q9NRC1 585 aa10.54□□□□□ -0.72
COL8A1-206ENST00000474648 COMMD8Q9NX08 183 aa10.54□□□□□ -0.72
COL8A1-206ENST00000474648 CHORDC1Q9UHD1 332 aaPredicted RBP10.54□□□□□ -0.72
COL8A1-206ENST00000474648 PYCARDQ9ULZ3 195 aa10.54□□□□□ -0.72
COL8A1-206ENST00000474648 TFR2Q9UP52 801 aa10.54□□□□□ -0.72
COL8A1-206ENST00000474648 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP10.54□□□□□ -0.72
COL8A1-206ENST00000474648 ANKRD62A6NC57 917 aa10.53□□□□□ -0.72
COL8A1-206ENST00000474648 LINC01565O15544 149 aa10.53□□□□□ -0.72
COL8A1-206ENST00000474648 RFPL2O75678 378 aa10.53□□□□□ -0.72
COL8A1-206ENST00000474648 GLP2RO95838 553 aa10.53□□□□□ -0.72
COL8A1-206ENST00000474648 CYP1A2P05177 515 aa10.53□□□□□ -0.72
COL8A1-206ENST00000474648 USP17L7P0C7H9 530 aa10.53□□□□□ -0.72
COL8A1-206ENST00000474648 RRM1P23921 792 aa10.53□□□□□ -0.72
COL8A1-206ENST00000474648 PGFP49763 221 aa10.53□□□□□ -0.72
COL8A1-206ENST00000474648 EPHB3P54753 998 aa10.53□□□□□ -0.72
COL8A1-206ENST00000474648 GPC5P78333 572 aa10.53□□□□□ -0.72
COL8A1-206ENST00000474648 ADIGQ0VDE8 80 aa10.53□□□□□ -0.72
COL8A1-206ENST00000474648 COL19A1Q14993 1142 aa10.53□□□□□ -0.72
COL8A1-206ENST00000474648 SPA17Q15506 151 aa10.53□□□□□ -0.72
COL8A1-206ENST00000474648 TAF5Q15542 800 aa10.53□□□□□ -0.72
COL8A1-206ENST00000474648 CTC1Q2NKJ3 1217 aa10.53□□□□□ -0.72
COL8A1-206ENST00000474648 HS1BP3Q53T59 392 aa10.53□□□□□ -0.72
COL8A1-206ENST00000474648 PPM1LQ5SGD2 360 aa10.53□□□□□ -0.72
COL8A1-206ENST00000474648 LIN9Q5TKA1 542 aa10.53□□□□□ -0.72
COL8A1-206ENST00000474648 PLEKHA7Q6IQ23 1121 aa10.53□□□□□ -0.72
COL8A1-206ENST00000474648 OLFML1Q6UWY5 402 aa10.53□□□□□ -0.72
COL8A1-206ENST00000474648 DENND5BQ6ZUT9 1274 aa10.53□□□□□ -0.72
COL8A1-206ENST00000474648 FAM183BPQ6ZVS7 135 aa10.53□□□□□ -0.72
COL8A1-206ENST00000474648 Q7L0L9 218 aa10.53□□□□□ -0.72
COL8A1-206ENST00000474648 SCD5Q86SK9 330 aa10.53□□□□□ -0.72
COL8A1-206ENST00000474648 SCML4Q8N228 414 aa10.53□□□□□ -0.72
COL8A1-206ENST00000474648 CLEC4CQ8WTT0 213 aa10.53□□□□□ -0.72
COL8A1-206ENST00000474648 ZNF707Q96C28 371 aaPredicted RBP10.53□□□□□ -0.72
COL8A1-206ENST00000474648 ARHGEF26Q96DR7 871 aa10.53□□□□□ -0.72
COL8A1-206ENST00000474648 MYRFLQ96LU7 910 aa10.53□□□□□ -0.72
COL8A1-206ENST00000474648 CDX2Q99626 313 aaPredicted RBP10.53□□□□□ -0.72
COL8A1-206ENST00000474648 TTLL2Q9BWV7 592 aa10.53□□□□□ -0.72
COL8A1-206ENST00000474648 ULBP1Q9BZM6 244 aa10.53□□□□□ -0.72
COL8A1-206ENST00000474648 LACRTQ9GZZ8 138 aa10.53□□□□□ -0.72
COL8A1-206ENST00000474648 MIS12Q9H081 205 aa10.53□□□□□ -0.72
COL8A1-206ENST00000474648 THAP2Q9H0W7 228 aa10.53□□□□□ -0.72
COL8A1-206ENST00000474648 LRRC4Q9HBW1 653 aa10.53□□□□□ -0.72
COL8A1-206ENST00000474648 INTUQ9ULD6 942 aa10.53□□□□□ -0.72
COL8A1-206ENST00000474648 ASB3Q9Y575 518 aa10.53□□□□□ -0.72
COL8A1-206ENST00000474648 CCL16O15467 120 aa10.52□□□□□ -0.73
COL8A1-206ENST00000474648 PJA2O43164 708 aa10.52□□□□□ -0.73
COL8A1-206ENST00000474648 NRDCO43847 1150 aa10.52□□□□□ -0.73
COL8A1-206ENST00000474648 FBXO21O94952 628 aa10.52□□□□□ -0.73
COL8A1-206ENST00000474648 RTN3O95197 1032 aaPredicted RBP10.52□□□□□ -0.73
COL8A1-206ENST00000474648 ZBED1O96006 694 aa10.52□□□□□ -0.73
COL8A1-206ENST00000474648 ABL1P00519 1130 aa10.52□□□□□ -0.73
COL8A1-206ENST00000474648 CALB1P05937 261 aa10.52□□□□□ -0.73
COL8A1-206ENST00000474648 FYNP06241 537 aa10.52□□□□□ -0.73
COL8A1-206ENST00000474648 POU2F2P09086 479 aa10.52□□□□□ -0.73
COL8A1-206ENST00000474648 HNRNPA1P09651 372 aaKnown RBP eCLIP10.52□□□□□ -0.73
COL8A1-206ENST00000474648 TMEM253P0C7T8 217 aa10.52□□□□□ -0.73
COL8A1-206ENST00000474648 CSH1P0DML2 217 aa10.52□□□□□ -0.73
COL8A1-206ENST00000474648 CSH2P0DML3 217 aa10.52□□□□□ -0.73
COL8A1-206ENST00000474648 MYBL1P10243 752 aa10.52□□□□□ -0.73
COL8A1-206ENST00000474648 ABCB4P21439 1286 aa10.52□□□□□ -0.73
COL8A1-206ENST00000474648 IGFBP4P22692 258 aa10.52□□□□□ -0.73
COL8A1-206ENST00000474648 YWHAQP27348 245 aa10.52□□□□□ -0.73
COL8A1-206ENST00000474648 HOXA9P31269 272 aa10.52□□□□□ -0.73
COL8A1-206ENST00000474648 DEKP35659 375 aaKnown RBP10.52□□□□□ -0.73
COL8A1-206ENST00000474648 ARHGAP25P42331 645 aa10.52□□□□□ -0.73
COL8A1-206ENST00000474648 GSCP56915 257 aaPredicted RBP10.52□□□□□ -0.73
COL8A1-206ENST00000474648 DAOAP59103 153 aa10.52□□□□□ -0.73
COL8A1-206ENST00000474648 KRT83P78385 493 aa10.52□□□□□ -0.73
COL8A1-206ENST00000474648 MRPS5P82675 430 aaKnown RBP10.52□□□□□ -0.73
COL8A1-206ENST00000474648 SLC6A3Q01959 620 aa10.52□□□□□ -0.73
COL8A1-206ENST00000474648 PLD1Q13393 1074 aa10.52□□□□□ -0.73
COL8A1-206ENST00000474648 MAMLD1Q13495 774 aa10.52□□□□□ -0.73
COL8A1-206ENST00000474648 TCEAL1Q15170 157 aa10.52□□□□□ -0.73
COL8A1-206ENST00000474648 OR6B2Q6IFH4 312 aa10.52□□□□□ -0.73
COL8A1-206ENST00000474648 C12orf76Q8N812 135 aaPredicted RBP10.52□□□□□ -0.73
COL8A1-206ENST00000474648 IPO4Q8TEX9 1081 aaKnown RBP10.52□□□□□ -0.73
COL8A1-206ENST00000474648 IRGQQ8WZA9 623 aa10.52□□□□□ -0.73
COL8A1-206ENST00000474648 PPP2R3CQ969Q6 453 aa10.52□□□□□ -0.73
COL8A1-206ENST00000474648 PSMG2Q969U7 264 aa10.52□□□□□ -0.73
COL8A1-206ENST00000474648 PIWIL1Q96J94 861 aaKnown RBP10.52□□□□□ -0.73
COL8A1-206ENST00000474648 PRKD2Q9BZL6 878 aa10.52□□□□□ -0.73
COL8A1-206ENST00000474648 NMUR1Q9HB89 426 aa10.52□□□□□ -0.73
COL8A1-206ENST00000474648 IL21Q9HBE4 155 aa10.52□□□□□ -0.73
COL8A1-206ENST00000474648 AVENQ9NQS1 362 aaPredicted RBP10.52□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 43 ms