RNA–Protein interactions for RNA: ENST00000474647.1

CCDC78-209, Transcript of coiled-coil domain containing 78, humanhuman

TSL 3

Gene CCDC78, Length 506 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC78-209ENST00000474647 NME7Q9Y5B8 376 aa14.9□□□□□ -0.02
CCDC78-209ENST00000474647 CACNA1EQ15878 2313 aa14.89□□□□□ -0.03
CCDC78-209ENST00000474647 CLDN5O00501 218 aa14.89□□□□□ -0.03
CCDC78-209ENST00000474647 OLFM2O95897 454 aa14.89□□□□□ -0.03
CCDC78-209ENST00000474647 CFIP05156 583 aa14.89□□□□□ -0.03
CCDC78-209ENST00000474647 EIF2DP41214 584 aaKnown RBP14.89□□□□□ -0.03
CCDC78-209ENST00000474647 WDR72Q3MJ13 1102 aa14.89□□□□□ -0.03
CCDC78-209ENST00000474647 LYSMD4Q5XG99 296 aa14.89□□□□□ -0.03
CCDC78-209ENST00000474647 RHBDF2Q6PJF5 856 aa14.89□□□□□ -0.03
CCDC78-209ENST00000474647 TRAPPC11Q7Z392 1133 aa14.89□□□□□ -0.03
CCDC78-209ENST00000474647 DDX42Q86XP3 938 aaKnown RBP eCLIP14.89□□□□□ -0.03
CCDC78-209ENST00000474647 NAT16Q8N8M0 369 aa14.89□□□□□ -0.03
CCDC78-209ENST00000474647 FBXO32Q969P5 355 aa14.89□□□□□ -0.03
CCDC78-209ENST00000474647 FNBP1Q96RU3 617 aa14.89□□□□□ -0.03
CCDC78-209ENST00000474647 TMEM74BQ9NUR3 256 aa14.89□□□□□ -0.03
CCDC78-209ENST00000474647 TMEM30AQ9NV96 361 aa14.89□□□□□ -0.03
CCDC78-209ENST00000474647 EVLQ9UI08 416 aaPredicted RBP14.89□□□□□ -0.03
CCDC78-209ENST00000474647 MBD1Q9UIS9 605 aaPredicted RBP14.89□□□□□ -0.03
CCDC78-209ENST00000474647 PTPRBP23467 1997 aa14.89□□□□□ -0.03
CCDC78-209ENST00000474647 TMEM131Q92545 1883 aa14.89□□□□□ -0.03
CCDC78-209ENST00000474647 FREM2Q5SZK8 3169 aa14.88□□□□□ -0.03
CCDC78-209ENST00000474647 A8MXQ7 604 aa14.88□□□□□ -0.03
CCDC78-209ENST00000474647 PALM2-AKAP2B1ALY0 433 aaPredicted RBP14.88□□□□□ -0.03
CCDC78-209ENST00000474647 TNFRSF10BO14763 440 aa14.88□□□□□ -0.03
CCDC78-209ENST00000474647 ADAM23O75077 832 aa14.88□□□□□ -0.03
CCDC78-209ENST00000474647 IRF1P10914 325 aa14.88□□□□□ -0.03
CCDC78-209ENST00000474647 ENGP17813 658 aa14.88□□□□□ -0.03
CCDC78-209ENST00000474647 PTPN1P18031 435 aaKnown RBP14.88□□□□□ -0.03
CCDC78-209ENST00000474647 PDCP20941 246 aa14.88□□□□□ -0.03
CCDC78-209ENST00000474647 GRIA2P42262 883 aa14.88□□□□□ -0.03
CCDC78-209ENST00000474647 KIR2DL1P43626 348 aaPredicted RBP14.88□□□□□ -0.03
CCDC78-209ENST00000474647 CYP2J2P51589 502 aa14.88□□□□□ -0.03
CCDC78-209ENST00000474647 ATXN3P54252 364 aaPredicted RBP14.88□□□□□ -0.03
CCDC78-209ENST00000474647 SNRNP35Q16560 246 aaKnown RBP14.88□□□□□ -0.03
CCDC78-209ENST00000474647 HSF5Q4G112 596 aaPredicted RBP14.88□□□□□ -0.03
CCDC78-209ENST00000474647 LY6G5CQ5SRR4 150 aa14.88□□□□□ -0.03
CCDC78-209ENST00000474647 BTBD8Q5XKL5 378 aa14.88□□□□□ -0.03
CCDC78-209ENST00000474647 SYT12Q8IV01 421 aa14.88□□□□□ -0.03
CCDC78-209ENST00000474647 DEFB119Q8N690 84 aa14.88□□□□□ -0.03
CCDC78-209ENST00000474647 CCDC127Q96BQ5 260 aa14.88□□□□□ -0.03
CCDC78-209ENST00000474647 GTPBP2Q9BX10 602 aaKnown RBP14.88□□□□□ -0.03
CCDC78-209ENST00000474647 SLC32A1Q9H598 525 aa14.88□□□□□ -0.03
CCDC78-209ENST00000474647 FSCN3Q9NQT6 498 aa14.88□□□□□ -0.03
CCDC78-209ENST00000474647 TBC1D14Q9P2M4 693 aa14.88□□□□□ -0.03
CCDC78-209ENST00000474647 NXF1Q9UBU9 619 aaKnown RBP14.88□□□□□ -0.03
CCDC78-209ENST00000474647 WASF3Q9UPY6 502 aa14.88□□□□□ -0.03
CCDC78-209ENST00000474647 SH3BP1Q9Y3L3 701 aa14.88□□□□□ -0.03
CCDC78-209ENST00000474647 ZFYVE26Q68DK2 2539 aa14.87□□□□□ -0.03
CCDC78-209ENST00000474647 TBC1D3BA6NDS4 549 aa14.87□□□□□ -0.03
CCDC78-209ENST00000474647 CLIC2O15247 247 aa14.87□□□□□ -0.03
CCDC78-209ENST00000474647 HYAL3O43820 417 aaPredicted RBP14.87□□□□□ -0.03
CCDC78-209ENST00000474647 TACC1O75410 805 aa14.87□□□□□ -0.03
CCDC78-209ENST00000474647 CST3P01034 146 aaPredicted RBP14.87□□□□□ -0.03
CCDC78-209ENST00000474647 ITPKAP23677 461 aa14.87□□□□□ -0.03
CCDC78-209ENST00000474647 YWHAQP27348 245 aa14.87□□□□□ -0.03
CCDC78-209ENST00000474647 RPL6Q02878 288 aaKnown RBP14.87□□□□□ -0.03
CCDC78-209ENST00000474647 GAD2Q05329 585 aa14.87□□□□□ -0.03
CCDC78-209ENST00000474647 TRPC3Q13507 836 aa14.87□□□□□ -0.03
CCDC78-209ENST00000474647 BYSLQ13895 437 aaKnown RBP14.87□□□□□ -0.03
CCDC78-209ENST00000474647 ANO4Q32M45 955 aa14.87□□□□□ -0.03
CCDC78-209ENST00000474647 NUP93Q8N1F7 819 aa14.87□□□□□ -0.03
CCDC78-209ENST00000474647 ZNF513Q8N8E2 541 aaPredicted RBP14.87□□□□□ -0.03
CCDC78-209ENST00000474647 KIAA1958Q8N8K9 716 aa14.87□□□□□ -0.03
CCDC78-209ENST00000474647 KDF1Q8NAX2 398 aaPredicted RBP14.87□□□□□ -0.03
CCDC78-209ENST00000474647 B3GALNT2Q8NCR0 500 aa14.87□□□□□ -0.03
CCDC78-209ENST00000474647 PDZD8Q8NEN9 1154 aa14.87□□□□□ -0.03
CCDC78-209ENST00000474647 ZCCHC14Q8WYQ9 949 aaKnown RBP14.87□□□□□ -0.03
CCDC78-209ENST00000474647 ERLEC1Q96DZ1 483 aa14.87□□□□□ -0.03
CCDC78-209ENST00000474647 USP28Q96RU2 1077 aa14.87□□□□□ -0.03
CCDC78-209ENST00000474647 CGRRF1Q99675 332 aa14.87□□□□□ -0.03
CCDC78-209ENST00000474647 MED10Q9BTT4 135 aa14.87□□□□□ -0.03
CCDC78-209ENST00000474647 B3GNT5Q9BYG0 378 aa14.87□□□□□ -0.03
CCDC78-209ENST00000474647 NACA2Q9H009 215 aa14.87□□□□□ -0.03
CCDC78-209ENST00000474647 KIAA1586Q9HCI6 787 aa14.87□□□□□ -0.03
CCDC78-209ENST00000474647 ADAMTS20P59510 1910 aa14.87□□□□□ -0.03
CCDC78-209ENST00000474647 PKD1L2Q7Z442 2459 aa14.87□□□□□ -0.03
CCDC78-209ENST00000474647 ATP8B3O60423 1300 aa14.87□□□□□ -0.03
CCDC78-209ENST00000474647 SPAARA0A1B0GVQ0 90 aa14.86□□□□□ -0.03
CCDC78-209ENST00000474647 E2F8A0AVK6 867 aa14.86□□□□□ -0.03
CCDC78-209ENST00000474647 TMEM8BA6NDV4 472 aa14.86□□□□□ -0.03
CCDC78-209ENST00000474647 AP5Z1O43299 807 aa14.86□□□□□ -0.03
CCDC78-209ENST00000474647 COCHO43405 550 aa14.86□□□□□ -0.03
CCDC78-209ENST00000474647 RTN3O95197 1032 aaPredicted RBP14.86□□□□□ -0.03
CCDC78-209ENST00000474647 HOXD13P35453 343 aa14.86□□□□□ -0.03
CCDC78-209ENST00000474647 DPP6P42658 865 aa14.86□□□□□ -0.03
CCDC78-209ENST00000474647 WASP42768 502 aa14.86□□□□□ -0.03
CCDC78-209ENST00000474647 TNFRSF4P43489 277 aa14.86□□□□□ -0.03
CCDC78-209ENST00000474647 ASIC1P78348 528 aa14.86□□□□□ -0.03
CCDC78-209ENST00000474647 CYP24A1Q07973 514 aa14.86□□□□□ -0.03
CCDC78-209ENST00000474647 MAP7D1Q3KQU3 841 aa14.86□□□□□ -0.03
CCDC78-209ENST00000474647 C10orf76Q5T2E6 689 aa14.86□□□□□ -0.03
CCDC78-209ENST00000474647 SCARA5Q6ZMJ2 495 aa14.86□□□□□ -0.03
CCDC78-209ENST00000474647 NELFCDQ8IXH7 590 aa14.86□□□□□ -0.03
CCDC78-209ENST00000474647 GATA6Q92908 595 aa14.86□□□□□ -0.03
CCDC78-209ENST00000474647 TMEM121BQ9BXQ6 578 aaPredicted RBP14.86□□□□□ -0.03
CCDC78-209ENST00000474647 TNMDQ9H2S6 317 aa14.86□□□□□ -0.03
CCDC78-209ENST00000474647 CCSER2Q9H7U1 834 aa14.86□□□□□ -0.03
CCDC78-209ENST00000474647 PLXNB3Q9ULL4 1909 aa14.86□□□□□ -0.03
CCDC78-209ENST00000474647 EIF3DO15371 548 aaKnown RBP eCLIP14.85□□□□□ -0.03
CCDC78-209ENST00000474647 PHACTR2O75167 634 aa14.85□□□□□ -0.03
Retrieved 100 of 20,778 RNA–protein pairs in 31.1 ms