RNA–Protein interactions for RNA: ENST00000474421.1

PDLIM4-206, Transcript of PDZ and LIM domain 4, humanhuman

TSL 3

Gene PDLIM4, Length 1,084 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM4-206ENST00000474421 SYT13Q7L8C5 426 aa21.58■■□□□ 1.05
PDLIM4-206ENST00000474421 FILIP1Q7Z7B0 1213 aa21.58■■□□□ 1.05
PDLIM4-206ENST00000474421 FAM186BQ8IYM0 893 aa21.58■■□□□ 1.05
PDLIM4-206ENST00000474421 CCDC150Q8NCX0 1101 aa21.58■■□□□ 1.05
PDLIM4-206ENST00000474421 RPLP0P6Q8NHW5 317 aa21.58■■□□□ 1.05
PDLIM4-206ENST00000474421 GAB3Q8WWW8 586 aa21.58■■□□□ 1.05
PDLIM4-206ENST00000474421 FBXO44Q9H4M3 255 aa21.58■■□□□ 1.05
PDLIM4-206ENST00000474421 CYP3A43Q9HB55 503 aa21.58■■□□□ 1.05
PDLIM4-206ENST00000474421 CFAP97Q9P2B7 532 aa21.58■■□□□ 1.05
PDLIM4-206ENST00000474421 TBC1D14Q9P2M4 693 aa21.58■■□□□ 1.05
PDLIM4-206ENST00000474421 CDV3Q9UKY7 258 aaKnown RBP21.58■■□□□ 1.05
PDLIM4-206ENST00000474421 MAPK8IP1Q9UQF2 711 aa21.58■■□□□ 1.05
PDLIM4-206ENST00000474421 RPP40O75818 363 aaKnown RBP21.57■■□□□ 1.04
PDLIM4-206ENST00000474421 ASPAP45381 313 aa21.57■■□□□ 1.04
PDLIM4-206ENST00000474421 ADAM9Q13443 819 aa21.57■■□□□ 1.04
PDLIM4-206ENST00000474421 NAIF1Q69YI7 327 aaPredicted RBP21.57■■□□□ 1.04
PDLIM4-206ENST00000474421 CACNA2D4Q7Z3S7 1137 aa21.57■■□□□ 1.04
PDLIM4-206ENST00000474421 ADGRG2Q8IZP9 1017 aa21.57■■□□□ 1.04
PDLIM4-206ENST00000474421 SCAMP5Q8TAC9 235 aa21.57■■□□□ 1.04
PDLIM4-206ENST00000474421 SLC2A14Q8TDB8 520 aa21.57■■□□□ 1.04
PDLIM4-206ENST00000474421 ELMO3Q96BJ8 720 aa21.57■■□□□ 1.04
PDLIM4-206ENST00000474421 GOLPH3LQ9H4A5 285 aa21.57■■□□□ 1.04
PDLIM4-206ENST00000474421 PARD6AQ9NPB6 346 aa21.57■■□□□ 1.04
PDLIM4-206ENST00000474421 MYO16Q9Y6X6 1858 aa21.57■■□□□ 1.04
PDLIM4-206ENST00000474421 E2F8A0AVK6 867 aa21.56■■□□□ 1.04
PDLIM4-206ENST00000474421 FAM92AA1XBS5 289 aa21.56■■□□□ 1.04
PDLIM4-206ENST00000474421 ADH1CP00326 375 aa21.56■■□□□ 1.04
PDLIM4-206ENST00000474421 GTF2H1P32780 548 aa21.56■■□□□ 1.04
PDLIM4-206ENST00000474421 GCLMP48507 274 aa21.56■■□□□ 1.04
PDLIM4-206ENST00000474421 INCA1Q0VD86 236 aa21.56■■□□□ 1.04
PDLIM4-206ENST00000474421 BECN1Q14457 450 aa21.56■■□□□ 1.04
PDLIM4-206ENST00000474421 EDRF1Q3B7T1 1238 aa21.56■■□□□ 1.04
PDLIM4-206ENST00000474421 SPOPLQ6IQ16 392 aa21.56■■□□□ 1.04
PDLIM4-206ENST00000474421 FAM160A2Q8N612 972 aaPredicted RBP21.56■■□□□ 1.04
PDLIM4-206ENST00000474421 OTUB2Q96DC9 234 aa21.56■■□□□ 1.04
PDLIM4-206ENST00000474421 LOXL4Q96JB6 756 aa21.56■■□□□ 1.04
PDLIM4-206ENST00000474421 CSNK1G1Q9HCP0 422 aa21.56■■□□□ 1.04
PDLIM4-206ENST00000474421 RMND1Q9NWS8 449 aa21.56■■□□□ 1.04
PDLIM4-206ENST00000474421 CHORDC1Q9UHD1 332 aaPredicted RBP21.56■■□□□ 1.04
PDLIM4-206ENST00000474421 KIAA1549LQ6ZVL6 1849 aa21.56■■□□□ 1.04
PDLIM4-206ENST00000474421 COCHO43405 550 aa21.55■■□□□ 1.04
PDLIM4-206ENST00000474421 APBB3O95704 486 aa21.55■■□□□ 1.04
PDLIM4-206ENST00000474421 CYP17A1P05093 508 aa21.55■■□□□ 1.04
PDLIM4-206ENST00000474421 ZDHHC11BP0C7U3 371 aa21.55■■□□□ 1.04
PDLIM4-206ENST00000474421 FAM200BP0CF97 657 aa21.55■■□□□ 1.04
PDLIM4-206ENST00000474421 TRIM49P0CI25 452 aa21.55■■□□□ 1.04
PDLIM4-206ENST00000474421 TRIM49CP0CI26 452 aa21.55■■□□□ 1.04
PDLIM4-206ENST00000474421 CCDC192P0DO97 292 aa21.55■■□□□ 1.04
PDLIM4-206ENST00000474421 CCDC130P13994 396 aa21.55■■□□□ 1.04
PDLIM4-206ENST00000474421 OPRD1P41143 372 aa21.55■■□□□ 1.04
PDLIM4-206ENST00000474421 EIF2DP41214 584 aaKnown RBP21.55■■□□□ 1.04
PDLIM4-206ENST00000474421 PXNP49023 591 aaPredicted RBP21.55■■□□□ 1.04
PDLIM4-206ENST00000474421 DHCR24Q15392 516 aa21.55■■□□□ 1.04
PDLIM4-206ENST00000474421 CSRP2Q16527 193 aa21.55■■□□□ 1.04
PDLIM4-206ENST00000474421 TAS1R2Q8TE23 839 aa21.55■■□□□ 1.04
PDLIM4-206ENST00000474421 SMOQ99835 787 aa21.55■■□□□ 1.04
PDLIM4-206ENST00000474421 NT5C1AQ9BXI3 368 aa21.55■■□□□ 1.04
PDLIM4-206ENST00000474421 NIF3L1Q9GZT8 377 aa21.55■■□□□ 1.04
PDLIM4-206ENST00000474421 NACA2Q9H009 215 aa21.55■■□□□ 1.04
PDLIM4-206ENST00000474421 TMEM8AQ9HCN3 771 aa21.55■■□□□ 1.04
PDLIM4-206ENST00000474421 SEMA4GQ9NTN9 838 aa21.55■■□□□ 1.04
PDLIM4-206ENST00000474421 GOLGA6L4A6NEF3 574 aa21.54■■□□□ 1.04
PDLIM4-206ENST00000474421 AXIN1O15169 862 aa21.54■■□□□ 1.04
PDLIM4-206ENST00000474421 MAP3K7CLP57077 242 aa21.54■■□□□ 1.04
PDLIM4-206ENST00000474421 PPP3CAQ08209 521 aa21.54■■□□□ 1.04
PDLIM4-206ENST00000474421 ORC1Q13415 861 aa21.54■■□□□ 1.04
PDLIM4-206ENST00000474421 DMC1Q14565 340 aa21.54■■□□□ 1.04
PDLIM4-206ENST00000474421 ZCWPW2Q504Y3 356 aa21.54■■□□□ 1.04
PDLIM4-206ENST00000474421 C12orf29Q8N999 325 aa21.54■■□□□ 1.04
PDLIM4-206ENST00000474421 EZH1Q92800 747 aaPredicted RBP21.54■■□□□ 1.04
PDLIM4-206ENST00000474421 FAXDC2Q96IV6 333 aa21.54■■□□□ 1.04
PDLIM4-206ENST00000474421 HHIPQ96QV1 700 aa21.54■■□□□ 1.04
PDLIM4-206ENST00000474421 HNRNPABQ99729 332 aaKnown RBP21.54■■□□□ 1.04
PDLIM4-206ENST00000474421 DUSP9Q99956 384 aaKnown RBP21.54■■□□□ 1.04
PDLIM4-206ENST00000474421 RTKNQ9BST9 563 aa21.54■■□□□ 1.04
PDLIM4-206ENST00000474421 GDPD2Q9HCC8 539 aa21.54■■□□□ 1.04
PDLIM4-206ENST00000474421 TLR8Q9NR97 1041 aaKnown RBP21.54■■□□□ 1.04
PDLIM4-206ENST00000474421 FAM49BQ9NUQ9 324 aa21.54■■□□□ 1.04
PDLIM4-206ENST00000474421 GMIPQ9P107 970 aa21.54■■□□□ 1.04
PDLIM4-206ENST00000474421 HMGXB4Q9UGU5 601 aa21.54■■□□□ 1.04
PDLIM4-206ENST00000474421 EBF1Q9UH73 591 aa21.54■■□□□ 1.04
PDLIM4-206ENST00000474421 SH3BP1Q9Y3L3 701 aa21.54■■□□□ 1.04
PDLIM4-206ENST00000474421 MYOFQ9NZM1 2061 aa21.54■■□□□ 1.04
PDLIM4-206ENST00000474421 SDK1Q7Z5N4 2213 aa21.53■■□□□ 1.04
PDLIM4-206ENST00000474421 PALM2-AKAP2B1ALY0 433 aaPredicted RBP21.53■■□□□ 1.04
PDLIM4-206ENST00000474421 CETN3O15182 167 aa21.53■■□□□ 1.04
PDLIM4-206ENST00000474421 STX10O60499 249 aa21.53■■□□□ 1.04
PDLIM4-206ENST00000474421 MCCD1P59942 119 aaPredicted RBP21.53■■□□□ 1.04
PDLIM4-206ENST00000474421 GAB4Q2WGN9 574 aa21.53■■□□□ 1.04
PDLIM4-206ENST00000474421 KRT39Q6A163 491 aa21.53■■□□□ 1.04
PDLIM4-206ENST00000474421 TTC39CQ8N584 583 aa21.53■■□□□ 1.04
PDLIM4-206ENST00000474421 ZMIZ2Q8NF64 920 aa21.53■■□□□ 1.04
PDLIM4-206ENST00000474421 USP33Q8TEY7 942 aa21.53■■□□□ 1.04
PDLIM4-206ENST00000474421 PNKPQ96T60 521 aa21.53■■□□□ 1.04
PDLIM4-206ENST00000474421 APOBEC3GQ9HC16 384 aaKnown RBP21.53■■□□□ 1.04
PDLIM4-206ENST00000474421 PNPLA8Q9NP80 782 aa21.53■■□□□ 1.04
PDLIM4-206ENST00000474421 EML5Q05BV3 1969 aa21.52■■□□□ 1.04
PDLIM4-206ENST00000474421 BEST1O76090 585 aa21.52■■□□□ 1.04
PDLIM4-206ENST00000474421 EPB41P11171 864 aaKnown RBP21.52■■□□□ 1.04
PDLIM4-206ENST00000474421 ADH5P11766 374 aa21.52■■□□□ 1.04
Retrieved 100 of 20,778 RNA–protein pairs in 15.7 ms