RNA–Protein interactions for RNA: ENST00000474246.1

SMARCE1-208, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily e, member 1, humanhuman

TSL 1 (best) BASIC

Gene SMARCE1, Length 2,124 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCE1-208ENST00000474246 DENND6AQ8IWF6 608 aa6.38□□□□□ -1.39
SMARCE1-208ENST00000474246 WDR63Q8IWG1 891 aa6.38□□□□□ -1.39
SMARCE1-208ENST00000474246 SLC15A3Q8IY34 581 aa6.38□□□□□ -1.39
SMARCE1-208ENST00000474246 OR6S1Q8NH40 331 aa6.38□□□□□ -1.39
SMARCE1-208ENST00000474246 KAT2BQ92831 832 aa6.38□□□□□ -1.39
SMARCE1-208ENST00000474246 CUL5Q93034 780 aa6.38□□□□□ -1.39
SMARCE1-208ENST00000474246 TMEM74Q96NL1 305 aa6.38□□□□□ -1.39
SMARCE1-208ENST00000474246 NFKBIZQ9BYH8 718 aa6.38□□□□□ -1.39
SMARCE1-208ENST00000474246 TRIM2Q9C040 744 aa6.38□□□□□ -1.39
SMARCE1-208ENST00000474246 EHD4Q9H223 541 aa6.38□□□□□ -1.39
SMARCE1-208ENST00000474246 TASP1Q9H6P5 420 aa6.38□□□□□ -1.39
SMARCE1-208ENST00000474246 LY9Q9HBG7 655 aa6.38□□□□□ -1.39
SMARCE1-208ENST00000474246 ANGPTL2Q9UKU9 493 aa6.38□□□□□ -1.39
SMARCE1-208ENST00000474246 AURKCQ9UQB9 309 aa6.38□□□□□ -1.39
SMARCE1-208ENST00000474246 TCF20Q9UGU0 1960 aaKnown RBP6.38□□□□□ -1.39
SMARCE1-208ENST00000474246 B2RBV5 119 aa6.38□□□□□ -1.39
SMARCE1-208ENST00000474246 HSBP1L1C9JCN9 74 aa6.38□□□□□ -1.39
SMARCE1-208ENST00000474246 ERVH48-1M5A8F1 160 aa6.38□□□□□ -1.39
SMARCE1-208ENST00000474246 SIAH2O43255 324 aa6.38□□□□□ -1.39
SMARCE1-208ENST00000474246 ATP8B1O43520 1251 aa6.38□□□□□ -1.39
SMARCE1-208ENST00000474246 SLC25A17O43808 307 aa6.38□□□□□ -1.39
SMARCE1-208ENST00000474246 CRTAPO75718 401 aaPredicted RBP6.38□□□□□ -1.39
SMARCE1-208ENST00000474246 ZBTB48P10074 688 aaPredicted RBP6.38□□□□□ -1.39
SMARCE1-208ENST00000474246 ANXA8P13928 327 aa6.38□□□□□ -1.39
SMARCE1-208ENST00000474246 POLR2EP19388 210 aaKnown RBP6.38□□□□□ -1.39
SMARCE1-208ENST00000474246 HOXA6P31267 233 aa6.38□□□□□ -1.39
SMARCE1-208ENST00000474246 GCKP35557 465 aa6.38□□□□□ -1.39
SMARCE1-208ENST00000474246 GRM5P41594 1212 aa6.38□□□□□ -1.39
SMARCE1-208ENST00000474246 STAT5AP42229 794 aa6.38□□□□□ -1.39
SMARCE1-208ENST00000474246 MRPL12P52815 198 aaKnown RBP6.38□□□□□ -1.39
SMARCE1-208ENST00000474246 ARF3P61204 181 aaPredicted RBP6.38□□□□□ -1.39
SMARCE1-208ENST00000474246 KCNJ10P78508 379 aa6.38□□□□□ -1.39
SMARCE1-208ENST00000474246 ARF1P84077 181 aaKnown RBP6.38□□□□□ -1.39
SMARCE1-208ENST00000474246 ARF5P84085 180 aa6.38□□□□□ -1.39
SMARCE1-208ENST00000474246 RALGDSQ12967 914 aa6.38□□□□□ -1.39
SMARCE1-208ENST00000474246 PPP6R3Q5H9R7 873 aaPredicted RBP6.38□□□□□ -1.39
SMARCE1-208ENST00000474246 UBXN11Q5T124 520 aa6.38□□□□□ -1.39
SMARCE1-208ENST00000474246 CYP4A22Q5TCH4 519 aa6.38□□□□□ -1.39
SMARCE1-208ENST00000474246 ANXA8L1Q5VT79 327 aa6.38□□□□□ -1.39
SMARCE1-208ENST00000474246 STYK1Q6J9G0 422 aa6.38□□□□□ -1.39
SMARCE1-208ENST00000474246 WDR93Q6P2C0 686 aa6.38□□□□□ -1.39
SMARCE1-208ENST00000474246 ERICH5Q6P6B1 374 aa6.38□□□□□ -1.39
SMARCE1-208ENST00000474246 DCLRE1AQ6PJP8 1040 aa6.38□□□□□ -1.39
SMARCE1-208ENST00000474246 ASCL5Q7RTU5 278 aa6.38□□□□□ -1.39
SMARCE1-208ENST00000474246 TADA2BQ86TJ2 420 aa6.38□□□□□ -1.39
SMARCE1-208ENST00000474246 PRPF39Q86UA1 669 aaKnown RBP6.38□□□□□ -1.39
SMARCE1-208ENST00000474246 CDH24Q86UP0 819 aa6.38□□□□□ -1.39
SMARCE1-208ENST00000474246 GALNT12Q8IXK2 581 aa6.38□□□□□ -1.39
SMARCE1-208ENST00000474246 EFHBQ8N7U6 833 aa6.38□□□□□ -1.39
SMARCE1-208ENST00000474246 SIMC1Q8NDZ2 872 aa6.38□□□□□ -1.39
SMARCE1-208ENST00000474246 LINS1Q8NG48 757 aa6.38□□□□□ -1.39
SMARCE1-208ENST00000474246 ZNF507Q8TCN5 953 aa6.38□□□□□ -1.39
SMARCE1-208ENST00000474246 SPPL3Q8TCT6 385 aa6.38□□□□□ -1.39
SMARCE1-208ENST00000474246 SAAL1Q96ER3 474 aa6.38□□□□□ -1.39
SMARCE1-208ENST00000474246 BTBD6Q96KE9 485 aa6.38□□□□□ -1.39
SMARCE1-208ENST00000474246 PRICKLE1Q96MT3 831 aaPredicted RBP6.38□□□□□ -1.39
SMARCE1-208ENST00000474246 PPP1R10Q96QC0 940 aaKnown RBP6.38□□□□□ -1.39
SMARCE1-208ENST00000474246 CRBNQ96SW2 442 aa6.38□□□□□ -1.39
SMARCE1-208ENST00000474246 CITED2Q99967 270 aaPredicted RBP6.38□□□□□ -1.39
SMARCE1-208ENST00000474246 OXCT2Q9BYC2 517 aaPredicted RBP6.38□□□□□ -1.39
SMARCE1-208ENST00000474246 CARD9Q9H257 536 aa6.38□□□□□ -1.39
SMARCE1-208ENST00000474246 AZI2Q9H6S1 392 aa6.38□□□□□ -1.39
SMARCE1-208ENST00000474246 FARSBQ9NSD9 589 aaKnown RBP6.38□□□□□ -1.39
SMARCE1-208ENST00000474246 SNTG1Q9NSN8 517 aa6.38□□□□□ -1.39
SMARCE1-208ENST00000474246 MARK1Q9P0L2 795 aa6.38□□□□□ -1.39
SMARCE1-208ENST00000474246 GRHPRQ9UBQ7 328 aa6.38□□□□□ -1.39
SMARCE1-208ENST00000474246 LRFN2Q9ULH4 789 aa6.38□□□□□ -1.39
SMARCE1-208ENST00000474246 POLIQ9UNA4 740 aa6.38□□□□□ -1.39
SMARCE1-208ENST00000474246 TARM1B6A8C7 271 aa6.37□□□□□ -1.39
SMARCE1-208ENST00000474246 F8W810 466 aa6.37□□□□□ -1.39
SMARCE1-208ENST00000474246 WNT7AO00755 349 aa6.37□□□□□ -1.39
SMARCE1-208ENST00000474246 PSMA7O14818 248 aa6.37□□□□□ -1.39
SMARCE1-208ENST00000474246 SEC24DO94855 1032 aaPredicted RBP6.37□□□□□ -1.39
SMARCE1-208ENST00000474246 NTRK1P04629 796 aa6.37□□□□□ -1.39
SMARCE1-208ENST00000474246 RETP07949 1114 aa6.37□□□□□ -1.39
SMARCE1-208ENST00000474246 TMIGD3P0DMS9 266 aaPredicted RBP6.37□□□□□ -1.39
SMARCE1-208ENST00000474246 MYL4P12829 197 aa6.37□□□□□ -1.39
SMARCE1-208ENST00000474246 POU3F2P20265 443 aaPredicted RBP6.37□□□□□ -1.39
SMARCE1-208ENST00000474246 TNFSF4P23510 183 aa6.37□□□□□ -1.39
SMARCE1-208ENST00000474246 IRS1P35568 1242 aa6.37□□□□□ -1.39
SMARCE1-208ENST00000474246 SCTRP47872 440 aa6.37□□□□□ -1.39
SMARCE1-208ENST00000474246 ARSDP51689 593 aa6.37□□□□□ -1.39
SMARCE1-208ENST00000474246 AFF1P51825 1210 aaKnown RBP6.37□□□□□ -1.39
SMARCE1-208ENST00000474246 NEK4P51957 841 aa6.37□□□□□ -1.39
SMARCE1-208ENST00000474246 CBX3Q13185 183 aa6.37□□□□□ -1.39
SMARCE1-208ENST00000474246 MSLNQ13421 630 aaPredicted RBP6.37□□□□□ -1.39
SMARCE1-208ENST00000474246 PTK2BQ14289 1009 aa6.37□□□□□ -1.39
SMARCE1-208ENST00000474246 PI16Q6UXB8 463 aa6.37□□□□□ -1.39
SMARCE1-208ENST00000474246 GPR142Q7Z601 462 aa6.37□□□□□ -1.39
SMARCE1-208ENST00000474246 FAM124AQ86V42 546 aa6.37□□□□□ -1.39
SMARCE1-208ENST00000474246 FAM178BQ8IXR5 827 aa6.37□□□□□ -1.39
SMARCE1-208ENST00000474246 C10orf67Q8IYJ2 551 aa6.37□□□□□ -1.39
SMARCE1-208ENST00000474246 TXLNBQ8N3L3 684 aa6.37□□□□□ -1.39
SMARCE1-208ENST00000474246 CCDC155Q8N6L0 562 aa6.37□□□□□ -1.39
SMARCE1-208ENST00000474246 KCTD6Q8NC69 237 aa6.37□□□□□ -1.39
SMARCE1-208ENST00000474246 CHST13Q8NET6 341 aa6.37□□□□□ -1.39
SMARCE1-208ENST00000474246 LPCAT1Q8NF37 534 aa6.37□□□□□ -1.39
SMARCE1-208ENST00000474246 SH3RF3Q8TEJ3 882 aaPredicted RBP6.37□□□□□ -1.39
SMARCE1-208ENST00000474246 GTF3C6Q969F1 213 aa6.37□□□□□ -1.39
SMARCE1-208ENST00000474246 KISS1RQ969F8 398 aaPredicted RBP6.37□□□□□ -1.39
Retrieved 100 of 20,778 RNA–protein pairs in 17.1 ms