RNA–Protein interactions for RNA: ENST00000474067.5

SNX13-206, Transcript of sorting nexin 13, humanhuman

TSL 3

Gene SNX13, Length 603 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX13-206ENST00000474067 NELFBQ8WX92 580 aa21.65■■□□□ 1.06
SNX13-206ENST00000474067 ERCC4Q92889 916 aaPredicted RBP21.65■■□□□ 1.06
SNX13-206ENST00000474067 SLC22A12Q96S37 553 aa21.65■■□□□ 1.06
SNX13-206ENST00000474067 CISHQ9NSE2 258 aa21.65■■□□□ 1.06
SNX13-206ENST00000474067 RAB23Q9ULC3 237 aa21.65■■□□□ 1.06
SNX13-206ENST00000474067 SH3BP1Q9Y3L3 701 aa21.65■■□□□ 1.06
SNX13-206ENST00000474067 HELZP42694 1942 aaKnown RBP21.65■■□□□ 1.06
SNX13-206ENST00000474067 E2F8A0AVK6 867 aa21.64■■□□□ 1.05
SNX13-206ENST00000474067 TRIM49BA6NDI0 452 aa21.64■■□□□ 1.05
SNX13-206ENST00000474067 ADH1CP00326 375 aa21.64■■□□□ 1.05
SNX13-206ENST00000474067 CCDC192P0DO97 292 aa21.64■■□□□ 1.05
SNX13-206ENST00000474067 CNR2P34972 360 aa21.64■■□□□ 1.05
SNX13-206ENST00000474067 CCINQ13939 588 aa21.64■■□□□ 1.05
SNX13-206ENST00000474067 EML3Q32P44 896 aa21.64■■□□□ 1.05
SNX13-206ENST00000474067 TRIM68Q6AZZ1 485 aa21.64■■□□□ 1.05
SNX13-206ENST00000474067 TXNDC11Q6PKC3 985 aa21.64■■□□□ 1.05
SNX13-206ENST00000474067 MAML2Q8IZL2 1156 aaPredicted RBP21.64■■□□□ 1.05
SNX13-206ENST00000474067 ARHGAP18Q8N392 663 aa21.64■■□□□ 1.05
SNX13-206ENST00000474067 C12orf29Q8N999 325 aa21.64■■□□□ 1.05
SNX13-206ENST00000474067 ZBTB44Q8NCP5 570 aa21.64■■□□□ 1.05
SNX13-206ENST00000474067 CD101Q93033 1021 aa21.64■■□□□ 1.05
SNX13-206ENST00000474067 SLC35C1Q96A29 364 aa21.64■■□□□ 1.05
SNX13-206ENST00000474067 SMOQ99835 787 aa21.64■■□□□ 1.05
SNX13-206ENST00000474067 DUSP9Q99956 384 aaKnown RBP21.64■■□□□ 1.05
SNX13-206ENST00000474067 UBXN6Q9BZV1 441 aa21.64■■□□□ 1.05
SNX13-206ENST00000474067 HMGXB4Q9UGU5 601 aa21.64■■□□□ 1.05
SNX13-206ENST00000474067 KIAA1257Q9ULG3 409 aa21.64■■□□□ 1.05
SNX13-206ENST00000474067 R4GN57 208 aa21.64■■□□□ 1.05
SNX13-206ENST00000474067 F5P12259 2224 aa21.63■■□□□ 1.05
SNX13-206ENST00000474067 GJA4P35212 333 aa21.63■■□□□ 1.05
SNX13-206ENST00000474067 FMO5P49326 533 aa21.63■■□□□ 1.05
SNX13-206ENST00000474067 PMS1P54277 932 aaKnown RBP21.63■■□□□ 1.05
SNX13-206ENST00000474067 CUL2Q13617 745 aa21.63■■□□□ 1.05
SNX13-206ENST00000474067 ISM2Q6H9L7 571 aa21.63■■□□□ 1.05
SNX13-206ENST00000474067 CLEC20AQ6ZU45 233 aa21.63■■□□□ 1.05
SNX13-206ENST00000474067 NUDT18Q6ZVK8 323 aa21.63■■□□□ 1.05
SNX13-206ENST00000474067 ASCL5Q7RTU5 278 aa21.63■■□□□ 1.05
SNX13-206ENST00000474067 ACDQ96AP0 544 aa21.63■■□□□ 1.05
SNX13-206ENST00000474067 NT5C1BQ96P26 610 aa21.63■■□□□ 1.05
SNX13-206ENST00000474067 DUSP16Q9BY84 665 aa21.63■■□□□ 1.05
SNX13-206ENST00000474067 UTP3Q9NQZ2 479 aaKnown RBP eCLIP21.63■■□□□ 1.05
SNX13-206ENST00000474067 KIAA1468Q9P260 1216 aa21.63■■□□□ 1.05
SNX13-206ENST00000474067 HESX1Q9UBX0 185 aa21.63■■□□□ 1.05
SNX13-206ENST00000474067 SCML2Q9UQR0 700 aa21.63■■□□□ 1.05
SNX13-206ENST00000474067 WNT6Q9Y6F9 365 aa21.63■■□□□ 1.05
SNX13-206ENST00000474067 MYH10P35580 1976 aa21.62■■□□□ 1.05
SNX13-206ENST00000474067 PALM2-AKAP2B1ALY0 433 aaPredicted RBP21.62■■□□□ 1.05
SNX13-206ENST00000474067 ZDHHC11BP0C7U3 371 aa21.62■■□□□ 1.05
SNX13-206ENST00000474067 RALAP11233 206 aa21.62■■□□□ 1.05
SNX13-206ENST00000474067 PRKCSHP14314 528 aaPredicted RBP21.62■■□□□ 1.05
SNX13-206ENST00000474067 ARSAP15289 507 aa21.62■■□□□ 1.05
SNX13-206ENST00000474067 HOXA6P31267 233 aa21.62■■□□□ 1.05
SNX13-206ENST00000474067 ATP5C1P36542 298 aaKnown RBP21.62■■□□□ 1.05
SNX13-206ENST00000474067 EIF2DP41214 584 aaKnown RBP21.62■■□□□ 1.05
SNX13-206ENST00000474067 ORC1Q13415 861 aa21.62■■□□□ 1.05
SNX13-206ENST00000474067 CBWD6Q4V339 395 aa21.62■■□□□ 1.05
SNX13-206ENST00000474067 ZNF394Q53GI3 561 aa21.62■■□□□ 1.05
SNX13-206ENST00000474067 CBWD3Q5JTY5 395 aa21.62■■□□□ 1.05
SNX13-206ENST00000474067 CBWD5Q5RIA9 395 aa21.62■■□□□ 1.05
SNX13-206ENST00000474067 ARHGAP17Q68EM7 881 aa21.62■■□□□ 1.05
SNX13-206ENST00000474067 TTI2Q6NXR4 508 aa21.62■■□□□ 1.05
SNX13-206ENST00000474067 GPR161Q8N6U8 529 aaKnown RBP21.62■■□□□ 1.05
SNX13-206ENST00000474067 SCAMP5Q8TAC9 235 aa21.62■■□□□ 1.05
SNX13-206ENST00000474067 NELL1Q92832 810 aa21.62■■□□□ 1.05
SNX13-206ENST00000474067 SEMA4DQ92854 862 aa21.62■■□□□ 1.05
SNX13-206ENST00000474067 FAM81BQ96LP2 452 aa21.62■■□□□ 1.05
SNX13-206ENST00000474067 HINFPQ9BQA5 517 aa21.62■■□□□ 1.05
SNX13-206ENST00000474067 TMEM30AQ9NV96 361 aa21.62■■□□□ 1.05
SNX13-206ENST00000474067 CHORDC1Q9UHD1 332 aaPredicted RBP21.62■■□□□ 1.05
SNX13-206ENST00000474067 LSM7Q9UK45 103 aaKnown RBP21.62■■□□□ 1.05
SNX13-206ENST00000474067 CTNND2Q9UQB3 1225 aa21.62■■□□□ 1.05
SNX13-206ENST00000474067 WDFY4Q6ZS81 3184 aa21.61■■□□□ 1.05
SNX13-206ENST00000474067 COL4A3Q01955 1670 aa21.61■■□□□ 1.05
SNX13-206ENST00000474067 COCHO43405 550 aa21.61■■□□□ 1.05
SNX13-206ENST00000474067 TLR5O60602 858 aa21.61■■□□□ 1.05
SNX13-206ENST00000474067 GADD45BO75293 160 aaPredicted RBP21.61■■□□□ 1.05
SNX13-206ENST00000474067 ACO1P21399 889 aaKnown RBP21.61■■□□□ 1.05
SNX13-206ENST00000474067 KLHDC10Q6PID8 442 aa21.61■■□□□ 1.05
SNX13-206ENST00000474067 ZMIZ2Q8NF64 920 aa21.61■■□□□ 1.05
SNX13-206ENST00000474067 RUBCNQ92622 972 aa21.61■■□□□ 1.05
SNX13-206ENST00000474067 ELMO3Q96BJ8 720 aa21.61■■□□□ 1.05
SNX13-206ENST00000474067 TWNKQ96RR1 684 aa21.61■■□□□ 1.05
SNX13-206ENST00000474067 RNF38Q9H0F5 515 aa21.61■■□□□ 1.05
SNX13-206ENST00000474067 GMIPQ9P107 970 aa21.61■■□□□ 1.05
SNX13-206ENST00000474067 CFAP97Q9P2B7 532 aa21.61■■□□□ 1.05
SNX13-206ENST00000474067 UTP18Q9Y5J1 556 aaKnown RBP eCLIP21.61■■□□□ 1.05
SNX13-206ENST00000474067 PPP1R3GB7ZBB8 358 aa21.6■■□□□ 1.05
SNX13-206ENST00000474067 BIN1O00499 593 aa21.6■■□□□ 1.05
SNX13-206ENST00000474067 MARSP56192 900 aaKnown RBP21.6■■□□□ 1.05
SNX13-206ENST00000474067 STILQ15468 1287 aa21.6■■□□□ 1.05
SNX13-206ENST00000474067 SGO2Q562F6 1265 aa21.6■■□□□ 1.05
SNX13-206ENST00000474067 PPP1R26Q5T8A7 1209 aaPredicted RBP21.6■■□□□ 1.05
SNX13-206ENST00000474067 BTBD8Q5XKL5 378 aa21.6■■□□□ 1.05
SNX13-206ENST00000474067 CCDC186Q7Z3E2 898 aa21.6■■□□□ 1.05
SNX13-206ENST00000474067 ZNF276Q8N554 614 aa21.6■■□□□ 1.05
SNX13-206ENST00000474067 WHAMMQ8TF30 809 aa21.6■■□□□ 1.05
SNX13-206ENST00000474067 CYLDQ9NQC7 956 aa21.6■■□□□ 1.05
SNX13-206ENST00000474067 SMPD4Q9NXE4 827 aa21.6■■□□□ 1.05
SNX13-206ENST00000474067 DACH1Q9UI36 760 aa21.6■■□□□ 1.05
SNX13-206ENST00000474067 SLC8A2Q9UPR5 921 aa21.6■■□□□ 1.05
Retrieved 100 of 20,778 RNA–protein pairs in 38.9 ms