RNA–Protein interactions for RNA: ENST00000473533.6

HERC4-209, Transcript of HECT and RLD domain containing E3 ubiquitin protein ligase 4, humanhuman

TSL 1 (best)

Gene HERC4, Length 3,593 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERC4-209ENST00000473533 EPB41L1Q9H4G0 881 aa6.37□□□□□ -1.39
HERC4-209ENST00000473533 HACD3Q9P035 362 aa6.37□□□□□ -1.39
HERC4-209ENST00000473533 SIRPGQ9P1W8 387 aa6.37□□□□□ -1.39
HERC4-209ENST00000473533 ZNF70Q9UC06 446 aaPredicted RBP6.37□□□□□ -1.39
HERC4-209ENST00000473533 CHMP2BQ9UQN3 213 aa6.37□□□□□ -1.39
HERC4-209ENST00000473533 ANKRD31Q8N7Z5 1873 aa6.37□□□□□ -1.39
HERC4-209ENST00000473533 A0A0B4J269 797 aa6.37□□□□□ -1.39
HERC4-209ENST00000473533 TCRBV9S1A1TA0A576 114 aa6.37□□□□□ -1.39
HERC4-209ENST00000473533 SPDYE5A6NIY4 337 aa6.37□□□□□ -1.39
HERC4-209ENST00000473533 TCP10L2B9ZVM9 353 aa6.37□□□□□ -1.39
HERC4-209ENST00000473533 TRIM49D1C9J1S8 452 aa6.37□□□□□ -1.39
HERC4-209ENST00000473533 GOLGA8SH3BPF8 625 aa6.37□□□□□ -1.39
HERC4-209ENST00000473533 GOLGA8MH3BSY2 632 aa6.37□□□□□ -1.39
HERC4-209ENST00000473533 NFIBO00712 420 aa6.37□□□□□ -1.39
HERC4-209ENST00000473533 GLRA3O75311 464 aa6.37□□□□□ -1.39
HERC4-209ENST00000473533 H2AFYO75367 372 aaKnown RBP6.37□□□□□ -1.39
HERC4-209ENST00000473533 PRKCHP24723 683 aa6.37□□□□□ -1.39
HERC4-209ENST00000473533 GARSP41250 739 aaKnown RBP6.37□□□□□ -1.39
HERC4-209ENST00000473533 ELK3P41970 407 aa6.37□□□□□ -1.39
HERC4-209ENST00000473533 HK2P52789 917 aa6.37□□□□□ -1.39
HERC4-209ENST00000473533 RPL7AP62424 266 aaKnown RBP6.37□□□□□ -1.39
HERC4-209ENST00000473533 RPS6P62753 249 aaKnown RBP6.37□□□□□ -1.39
HERC4-209ENST00000473533 CNTN2Q02246 1040 aa6.37□□□□□ -1.39
HERC4-209ENST00000473533 NOMO1Q15155 1222 aa6.37□□□□□ -1.39
HERC4-209ENST00000473533 KCTD19Q17RG1 926 aaPredicted RBP6.37□□□□□ -1.39
HERC4-209ENST00000473533 SPDYE2Q495Y8 402 aa6.37□□□□□ -1.39
HERC4-209ENST00000473533 FNBP1LQ5T0N5 605 aa6.37□□□□□ -1.39
HERC4-209ENST00000473533 RFWD3Q6PCD5 774 aa6.37□□□□□ -1.39
HERC4-209ENST00000473533 IZUMO2Q6UXV1 221 aa6.37□□□□□ -1.39
HERC4-209ENST00000473533 MARK2Q7KZI7 788 aaKnown RBP6.37□□□□□ -1.39
HERC4-209ENST00000473533 PRPF39Q86UA1 669 aaKnown RBP6.37□□□□□ -1.39
HERC4-209ENST00000473533 SLC51AQ86UW1 340 aa6.37□□□□□ -1.39
HERC4-209ENST00000473533 ZBTB8OSQ8IWT0 167 aa6.37□□□□□ -1.39
HERC4-209ENST00000473533 ULK2Q8IYT8 1036 aa6.37□□□□□ -1.39
HERC4-209ENST00000473533 ALDH16A1Q8IZ83 802 aa6.37□□□□□ -1.39
HERC4-209ENST00000473533 CMASQ8NFW8 434 aaPredicted RBP6.37□□□□□ -1.39
HERC4-209ENST00000473533 BSNDQ8WZ55 320 aa6.37□□□□□ -1.39
HERC4-209ENST00000473533 FAM167AQ96KS9 214 aa6.37□□□□□ -1.39
HERC4-209ENST00000473533 ACAP3Q96P50 834 aa6.37□□□□□ -1.39
HERC4-209ENST00000473533 TAAR1Q96RJ0 339 aa6.37□□□□□ -1.39
HERC4-209ENST00000473533 TBCBQ99426 244 aa6.37□□□□□ -1.39
HERC4-209ENST00000473533 NAT9Q9BTE0 207 aa6.37□□□□□ -1.39
HERC4-209ENST00000473533 MRPL4Q9BYD3 311 aaKnown RBP6.37□□□□□ -1.39
HERC4-209ENST00000473533 PORCNQ9H237 461 aa6.37□□□□□ -1.39
HERC4-209ENST00000473533 NRDE2Q9H7Z3 1164 aa6.37□□□□□ -1.39
HERC4-209ENST00000473533 SLC17A7Q9P2U7 560 aa6.37□□□□□ -1.39
HERC4-209ENST00000473533 TEX264Q9Y6I9 313 aa6.37□□□□□ -1.39
HERC4-209ENST00000473533 LRRIQ4A6NIV6 560 aa6.36□□□□□ -1.39
HERC4-209ENST00000473533 CAPN14A8MX76 684 aa6.36□□□□□ -1.39
HERC4-209ENST00000473533 KBTBD13C9JR72 458 aa6.36□□□□□ -1.39
HERC4-209ENST00000473533 F8VP50 259 aa6.36□□□□□ -1.39
HERC4-209ENST00000473533 H7C0C1 242 aa6.36□□□□□ -1.39
HERC4-209ENST00000473533 CAPN15O75808 1086 aa6.36□□□□□ -1.39
HERC4-209ENST00000473533 CCNE2O96020 404 aa6.36□□□□□ -1.39
HERC4-209ENST00000473533 ENO1P06733 434 aaKnown RBP6.36□□□□□ -1.39
HERC4-209ENST00000473533 ETS1P14921 441 aa6.36□□□□□ -1.39
HERC4-209ENST00000473533 TAL1P17542 331 aaPredicted RBP6.36□□□□□ -1.39
HERC4-209ENST00000473533 CDC25CP30307 473 aa6.36□□□□□ -1.39
HERC4-209ENST00000473533 MAGEA6P43360 314 aa6.36□□□□□ -1.39
HERC4-209ENST00000473533 ATP5OP48047 213 aa6.36□□□□□ -1.39
HERC4-209ENST00000473533 NLRP11P59045 1033 aaKnown RBP6.36□□□□□ -1.39
HERC4-209ENST00000473533 PSMC1P62191 440 aaKnown RBP6.36□□□□□ -1.39
HERC4-209ENST00000473533 SLC25A11Q02978 314 aaKnown RBP6.36□□□□□ -1.39
HERC4-209ENST00000473533 FAAP100Q0VG06 881 aa6.36□□□□□ -1.39
HERC4-209ENST00000473533 KBTBD12Q3ZCT8 623 aa6.36□□□□□ -1.39
HERC4-209ENST00000473533 FAM160B1Q5W0V3 765 aa6.36□□□□□ -1.39
HERC4-209ENST00000473533 RIPOR1Q6ZS17 1223 aa6.36□□□□□ -1.39
HERC4-209ENST00000473533 ARHGAP22Q7Z5H3 698 aa6.36□□□□□ -1.39
HERC4-209ENST00000473533 SETD3Q86TU7 594 aaPredicted RBP6.36□□□□□ -1.39
HERC4-209ENST00000473533 VSIG10LQ86VR7 867 aa6.36□□□□□ -1.39
HERC4-209ENST00000473533 RASSF3Q86WH2 238 aa6.36□□□□□ -1.39
HERC4-209ENST00000473533 CCDC33Q8N5R6 958 aa6.36□□□□□ -1.39
HERC4-209ENST00000473533 MTMR14Q8NCE2 650 aa6.36□□□□□ -1.39
HERC4-209ENST00000473533 IL31RAQ8NI17 732 aa6.36□□□□□ -1.39
HERC4-209ENST00000473533 SPATA18Q8TC71 538 aa6.36□□□□□ -1.39
HERC4-209ENST00000473533 NCSTNQ92542 709 aa6.36□□□□□ -1.39
HERC4-209ENST00000473533 USP6NLQ92738 828 aa6.36□□□□□ -1.39
HERC4-209ENST00000473533 RTP4Q96DX8 246 aa6.36□□□□□ -1.39
HERC4-209ENST00000473533 KIFC3Q9BVG8 833 aa6.36□□□□□ -1.39
HERC4-209ENST00000473533 KLHL4Q9C0H6 718 aa6.36□□□□□ -1.39
HERC4-209ENST00000473533 VPS33BQ9H267 617 aa6.36□□□□□ -1.39
HERC4-209ENST00000473533 KCNK13Q9HB14 408 aa6.36□□□□□ -1.39
HERC4-209ENST00000473533 KLHL11Q9NVR0 708 aa6.36□□□□□ -1.39
HERC4-209ENST00000473533 COL20A1Q9P218 1284 aa6.36□□□□□ -1.39
HERC4-209ENST00000473533 KANSL3Q9P2N6 904 aa6.36□□□□□ -1.39
HERC4-209ENST00000473533 RGS17Q9UGC6 210 aaPredicted RBP6.36□□□□□ -1.39
HERC4-209ENST00000473533 ZC3H7BQ9UGR2 993 aaKnown RBP6.36□□□□□ -1.39
HERC4-209ENST00000473533 KIAA1257Q9ULG3 409 aa6.36□□□□□ -1.39
HERC4-209ENST00000473533 TMCO1Q9UM00 188 aa6.36□□□□□ -1.39
HERC4-209ENST00000473533 NUB1Q9Y5A7 615 aa6.36□□□□□ -1.39
HERC4-209ENST00000473533 ARID2Q68CP9 1835 aa6.36□□□□□ -1.39
HERC4-209ENST00000473533 FAM189A1O60320 539 aa6.36□□□□□ -1.39
HERC4-209ENST00000473533 IL18RAPO95256 599 aa6.36□□□□□ -1.39
HERC4-209ENST00000473533 BAG2O95816 211 aa6.36□□□□□ -1.39
HERC4-209ENST00000473533 ZBED1O96006 694 aa6.36□□□□□ -1.39
HERC4-209ENST00000473533 APOEP02649 317 aa6.36□□□□□ -1.39
HERC4-209ENST00000473533 NR3C2P08235 984 aa6.36□□□□□ -1.39
HERC4-209ENST00000473533 SUPT20HL2P0C7V6 817 aa6.36□□□□□ -1.39
HERC4-209ENST00000473533 PIM1P11309 404 aaPredicted RBP6.36□□□□□ -1.39
HERC4-209ENST00000473533 COPAP53621 1224 aa6.36□□□□□ -1.39
Retrieved 100 of 20,778 RNA–protein pairs in 27.8 ms