RNA–Protein interactions for RNA: ENST00000473470.1

CNOT4-209, Transcript of CCR4-NOT transcription complex subunit 4, humanhuman

TSL 2

Gene CNOT4, Length 707 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT4-209ENST00000473470 COBLL1Q53SF7 1204 aa5.44□□□□□ -1.54
CNOT4-209ENST00000473470 DARS2Q6PI48 645 aaKnown RBP5.44□□□□□ -1.54
CNOT4-209ENST00000473470 APOA5Q6Q788 366 aa5.44□□□□□ -1.54
CNOT4-209ENST00000473470 CCDC149Q6ZUS6 474 aa5.44□□□□□ -1.54
CNOT4-209ENST00000473470 C11orf96Q7Z7L8 435 aa5.44□□□□□ -1.54
CNOT4-209ENST00000473470 MPP5Q8N3R9 675 aa5.44□□□□□ -1.54
CNOT4-209ENST00000473470 SLC15A4Q8N697 577 aa5.44□□□□□ -1.54
CNOT4-209ENST00000473470 SAMD3Q8N6K7 520 aa5.44□□□□□ -1.54
CNOT4-209ENST00000473470 NT5C1BQ96P26 610 aa5.44□□□□□ -1.54
CNOT4-209ENST00000473470 HAPLN3Q96S86 360 aa5.44□□□□□ -1.54
CNOT4-209ENST00000473470 MS4A7Q9GZW8 240 aaPredicted RBP5.44□□□□□ -1.54
CNOT4-209ENST00000473470 A1CFQ9NQ94 594 aaKnown RBP5.44□□□□□ -1.54
CNOT4-209ENST00000473470 ASB6Q9NWX5 421 aa5.44□□□□□ -1.54
CNOT4-209ENST00000473470 TPCN1Q9ULQ1 816 aa5.44□□□□□ -1.54
CNOT4-209ENST00000473470 UGGT1Q9NYU2 1555 aa5.43□□□□□ -1.54
CNOT4-209ENST00000473470 VWC2LB2RUY7 222 aa5.43□□□□□ -1.54
CNOT4-209ENST00000473470 GOLIM4O00461 696 aa5.43□□□□□ -1.54
CNOT4-209ENST00000473470 TBX3O15119 743 aa5.43□□□□□ -1.54
CNOT4-209ENST00000473470 CCP110O43303 1012 aa5.43□□□□□ -1.54
CNOT4-209ENST00000473470 PEX14O75381 377 aa5.43□□□□□ -1.54
CNOT4-209ENST00000473470 NBPF7P0C2Y1 421 aaPredicted RBP5.43□□□□□ -1.54
CNOT4-209ENST00000473470 RPL17P18621 184 aaKnown RBP5.43□□□□□ -1.54
CNOT4-209ENST00000473470 MYO1EQ12965 1108 aa5.43□□□□□ -1.54
CNOT4-209ENST00000473470 PICALMQ13492 652 aa5.43□□□□□ -1.54
CNOT4-209ENST00000473470 EZH2Q15910 746 aaKnown RBP5.43□□□□□ -1.54
CNOT4-209ENST00000473470 INSCQ1MX18 579 aa5.43□□□□□ -1.54
CNOT4-209ENST00000473470 AARS2Q5JTZ9 985 aaKnown RBP5.43□□□□□ -1.54
CNOT4-209ENST00000473470 ZNF362Q5T0B9 420 aaPredicted RBP5.43□□□□□ -1.54
CNOT4-209ENST00000473470 CERCAMQ5T4B2 595 aa5.43□□□□□ -1.54
CNOT4-209ENST00000473470 SWSAP1Q6NVH7 229 aa5.43□□□□□ -1.54
CNOT4-209ENST00000473470 CEP85Q6P2H3 762 aa5.43□□□□□ -1.54
CNOT4-209ENST00000473470 SLC29A4Q7RTT9 530 aa5.43□□□□□ -1.54
CNOT4-209ENST00000473470 FAM156AQ8NDB6 213 aa5.43□□□□□ -1.54
CNOT4-209ENST00000473470 RP9Q8TA86 221 aaKnown RBP5.43□□□□□ -1.54
CNOT4-209ENST00000473470 SMCR8Q8TEV9 937 aaPredicted RBP5.43□□□□□ -1.54
CNOT4-209ENST00000473470 OSCP1Q8WVF1 389 aa5.43□□□□□ -1.54
CNOT4-209ENST00000473470 SPSB4Q96A44 273 aa5.43□□□□□ -1.54
CNOT4-209ENST00000473470 NMD3Q96D46 503 aaKnown RBP5.43□□□□□ -1.54
CNOT4-209ENST00000473470 BTBD1Q9H0C5 482 aa5.43□□□□□ -1.54
CNOT4-209ENST00000473470 SERHLQ9NQF3 203 aa5.43□□□□□ -1.54
CNOT4-209ENST00000473470 SERTAD4Q9NUC0 356 aa5.43□□□□□ -1.54
CNOT4-209ENST00000473470 MED14O60244 1454 aa5.43□□□□□ -1.54
CNOT4-209ENST00000473470 NUP153P49790 1475 aaKnown RBP5.43□□□□□ -1.54
CNOT4-209ENST00000473470 ZNF518AQ6AHZ1 1483 aa5.43□□□□□ -1.54
CNOT4-209ENST00000473470 KIDINS220Q9ULH0 1771 aa5.42□□□□□ -1.54
CNOT4-209ENST00000473470 POLR2AP24928 1970 aaKnown RBP5.42□□□□□ -1.54
CNOT4-209ENST00000473470 TRIM43BA6NCK2 446 aa5.42□□□□□ -1.54
CNOT4-209ENST00000473470 FOXN3O00409 490 aaPredicted RBP5.42□□□□□ -1.54
CNOT4-209ENST00000473470 APAF1O14727 1248 aa5.42□□□□□ -1.54
CNOT4-209ENST00000473470 IL6RP08887 468 aaPredicted RBP5.42□□□□□ -1.54
CNOT4-209ENST00000473470 DLDP09622 509 aaKnown RBP5.42□□□□□ -1.54
CNOT4-209ENST00000473470 NPSP0C0P6 89 aa5.42□□□□□ -1.54
CNOT4-209ENST00000473470 CLCN2P51788 898 aa5.42□□□□□ -1.54
CNOT4-209ENST00000473470 ATXN1P54253 815 aaKnown RBP5.42□□□□□ -1.54
CNOT4-209ENST00000473470 PRKAG1P54619 331 aa5.42□□□□□ -1.54
CNOT4-209ENST00000473470 MRPS21P82921 87 aaKnown RBP5.42□□□□□ -1.54
CNOT4-209ENST00000473470 SEMA5AQ13591 1074 aa5.42□□□□□ -1.54
CNOT4-209ENST00000473470 LLGL1Q15334 1064 aa5.42□□□□□ -1.54
CNOT4-209ENST00000473470 SYCP2LQ5T4T6 812 aa5.42□□□□□ -1.54
CNOT4-209ENST00000473470 RNF220Q5VTB9 566 aa5.42□□□□□ -1.54
CNOT4-209ENST00000473470 IPCEF1Q8WWN9 437 aaPredicted RBP5.42□□□□□ -1.54
CNOT4-209ENST00000473470 SOCS4Q8WXH5 440 aa5.42□□□□□ -1.54
CNOT4-209ENST00000473470 PMM1Q92871 262 aa5.42□□□□□ -1.54
CNOT4-209ENST00000473470 TRIM43Q96BQ3 446 aaPredicted RBP5.42□□□□□ -1.54
CNOT4-209ENST00000473470 ZCWPW1Q9H0M4 648 aa5.42□□□□□ -1.54
CNOT4-209ENST00000473470 CXorf36Q9H7Y0 433 aa5.42□□□□□ -1.54
CNOT4-209ENST00000473470 SMURF2Q9HAU4 748 aa5.42□□□□□ -1.54
CNOT4-209ENST00000473470 TRPC5Q9UL62 973 aaPredicted RBP5.42□□□□□ -1.54
CNOT4-209ENST00000473470 OGDHLQ9ULD0 1010 aa5.42□□□□□ -1.54
CNOT4-209ENST00000473470 SSX2IPQ9Y2D8 614 aa5.42□□□□□ -1.54
CNOT4-209ENST00000473470 ARHGEF17Q96PE2 2063 aaPredicted RBP5.42□□□□□ -1.54
CNOT4-209ENST00000473470 DIP2AQ14689 1571 aa5.42□□□□□ -1.54
CNOT4-209ENST00000473470 DEPDC5O75140 1603 aa5.41□□□□□ -1.54
CNOT4-209ENST00000473470 FGD6Q6ZV73 1430 aa5.41□□□□□ -1.54
CNOT4-209ENST00000473470 QSOX1O00391 747 aa5.41□□□□□ -1.54
CNOT4-209ENST00000473470 PMM2O15305 246 aa5.41□□□□□ -1.54
CNOT4-209ENST00000473470 C1QL1O75973 258 aa5.41□□□□□ -1.54
CNOT4-209ENST00000473470 TJP3O95049 919 aa5.41□□□□□ -1.54
CNOT4-209ENST00000473470 INMTO95050 263 aa5.41□□□□□ -1.54
CNOT4-209ENST00000473470 PEX2P28328 305 aa5.41□□□□□ -1.54
CNOT4-209ENST00000473470 MTHFSP49914 203 aa5.41□□□□□ -1.54
CNOT4-209ENST00000473470 DGKEP52429 567 aa5.41□□□□□ -1.54
CNOT4-209ENST00000473470 SLC10A2Q12908 348 aaPredicted RBP5.41□□□□□ -1.54
CNOT4-209ENST00000473470 CTBP1Q13363 440 aa5.41□□□□□ -1.54
CNOT4-209ENST00000473470 CCDC142Q17RM4 750 aa5.41□□□□□ -1.54
CNOT4-209ENST00000473470 PLA1AQ53H76 456 aa5.41□□□□□ -1.54
CNOT4-209ENST00000473470 FCRLBQ6BAA4 426 aa5.41□□□□□ -1.54
CNOT4-209ENST00000473470 MTHFD1LQ6UB35 978 aa5.41□□□□□ -1.54
CNOT4-209ENST00000473470 MAVSQ7Z434 540 aa5.41□□□□□ -1.54
CNOT4-209ENST00000473470 RASAL3Q86YV0 1011 aa5.41□□□□□ -1.54
CNOT4-209ENST00000473470 KRT78Q8N1N4 520 aa5.41□□□□□ -1.54
CNOT4-209ENST00000473470 LRRC71Q8N4P6 559 aa5.41□□□□□ -1.54
CNOT4-209ENST00000473470 HASPINQ8TF76 798 aa5.41□□□□□ -1.54
CNOT4-209ENST00000473470 RPS6KC1Q96S38 1066 aa5.41□□□□□ -1.54
CNOT4-209ENST00000473470 BHMT2Q9H2M3 363 aa5.41□□□□□ -1.54
CNOT4-209ENST00000473470 PADI4Q9UM07 663 aa5.41□□□□□ -1.54
CNOT4-209ENST00000473470 FAM50BQ9Y247 325 aa5.41□□□□□ -1.54
CNOT4-209ENST00000473470 ARHGAP5Q13017 1502 aa5.41□□□□□ -1.54
CNOT4-209ENST00000473470 FAM135AQ9P2D6 1515 aa5.41□□□□□ -1.54
CNOT4-209ENST00000473470 MAST1Q9Y2H9 1570 aa5.41□□□□□ -1.54
Retrieved 100 of 20,778 RNA–protein pairs in 337.9 ms