RNA–Protein interactions for RNA: ENST00000473417.5

SNX4-204, Transcript of sorting nexin 4, humanhuman

TSL 3

Gene SNX4, Length 754 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX4-204ENST00000473417 NT5C1BQ96P26 610 aa19.14■□□□□ 0.65
SNX4-204ENST00000473417 SLC22A12Q96S37 553 aa19.14■□□□□ 0.65
SNX4-204ENST00000473417 B3GNT5Q9BYG0 378 aa19.14■□□□□ 0.65
SNX4-204ENST00000473417 CACNA1AO00555 2505 aa19.13■□□□□ 0.65
SNX4-204ENST00000473417 TRAV19A0A0A6YYK7 116 aa19.13■□□□□ 0.65
SNX4-204ENST00000473417 SYCE3A1L190 88 aa19.13■□□□□ 0.65
SNX4-204ENST00000473417 CLDN5O00501 218 aa19.13■□□□□ 0.65
SNX4-204ENST00000473417 TRIM66O15016 1216 aa19.13■□□□□ 0.65
SNX4-204ENST00000473417 CILPO75339 1184 aa19.13■□□□□ 0.65
SNX4-204ENST00000473417 LETM1O95202 739 aaPredicted RBP19.13■□□□□ 0.65
SNX4-204ENST00000473417 PAPSS2O95340 614 aaPredicted RBP19.13■□□□□ 0.65
SNX4-204ENST00000473417 CKMP06732 381 aa19.13■□□□□ 0.65
SNX4-204ENST00000473417 USP17L7P0C7H9 530 aa19.13■□□□□ 0.65
SNX4-204ENST00000473417 PRKCSHP14314 528 aaPredicted RBP19.13■□□□□ 0.65
SNX4-204ENST00000473417 ANXA13P27216 316 aa19.13■□□□□ 0.65
SNX4-204ENST00000473417 GRIK1P39086 918 aa19.13■□□□□ 0.65
SNX4-204ENST00000473417 SATB1Q01826 763 aa19.13■□□□□ 0.65
SNX4-204ENST00000473417 CUL2Q13617 745 aa19.13■□□□□ 0.65
SNX4-204ENST00000473417 MTF1Q14872 753 aa19.13■□□□□ 0.65
SNX4-204ENST00000473417 ZNF77Q15935 545 aa19.13■□□□□ 0.65
SNX4-204ENST00000473417 MAN2A1Q16706 1144 aa19.13■□□□□ 0.65
SNX4-204ENST00000473417 SKOR2Q2VWA4 1001 aaPredicted RBP19.13■□□□□ 0.65
SNX4-204ENST00000473417 ANO6Q4KMQ2 910 aa19.13■□□□□ 0.65
SNX4-204ENST00000473417 ZNF394Q53GI3 561 aa19.13■□□□□ 0.65
SNX4-204ENST00000473417 TRIM68Q6AZZ1 485 aa19.13■□□□□ 0.65
SNX4-204ENST00000473417 DENND5BQ6ZUT9 1274 aa19.13■□□□□ 0.65
SNX4-204ENST00000473417 CRYBG2Q8N1P7 616 aa19.13■□□□□ 0.65
SNX4-204ENST00000473417 HINFPQ9BQA5 517 aa19.13■□□□□ 0.65
SNX4-204ENST00000473417 TUBGCP2Q9BSJ2 902 aa19.13■□□□□ 0.65
SNX4-204ENST00000473417 CRACR2AQ9BSW2 395 aa19.13■□□□□ 0.65
SNX4-204ENST00000473417 MED10Q9BTT4 135 aa19.13■□□□□ 0.65
SNX4-204ENST00000473417 TTLL2Q9BWV7 592 aa19.13■□□□□ 0.65
SNX4-204ENST00000473417 NT5C1AQ9BXI3 368 aa19.13■□□□□ 0.65
SNX4-204ENST00000473417 ZNF518BQ9C0D4 1074 aa19.13■□□□□ 0.65
SNX4-204ENST00000473417 ELOVL4Q9GZR5 314 aa19.13■□□□□ 0.65
SNX4-204ENST00000473417 EBF3Q9H4W6 596 aa19.13■□□□□ 0.65
SNX4-204ENST00000473417 TRPC7Q9HCX4 862 aa19.13■□□□□ 0.65
SNX4-204ENST00000473417 CISHQ9NSE2 258 aa19.13■□□□□ 0.65
SNX4-204ENST00000473417 FANCLQ9NW38 375 aa19.13■□□□□ 0.65
SNX4-204ENST00000473417 GCNT4Q9P109 453 aa19.13■□□□□ 0.65
SNX4-204ENST00000473417 CEP250Q9BV73 2442 aa19.12■□□□□ 0.65
SNX4-204ENST00000473417 RALGAPA1Q6GYQ0 2036 aa19.12■□□□□ 0.65
SNX4-204ENST00000473417 C2orf78A6NCI8 922 aa19.12■□□□□ 0.65
SNX4-204ENST00000473417 OTOL1A6NHN0 477 aaPredicted RBP19.12■□□□□ 0.65
SNX4-204ENST00000473417 F8VP50 259 aa19.12■□□□□ 0.65
SNX4-204ENST00000473417 CXCL12P48061 93 aa19.12■□□□□ 0.65
SNX4-204ENST00000473417 NRLP54845 237 aa19.12■□□□□ 0.65
SNX4-204ENST00000473417 USP46P62068 366 aa19.12■□□□□ 0.65
SNX4-204ENST00000473417 MYL5Q02045 173 aa19.12■□□□□ 0.65
SNX4-204ENST00000473417 VWA3BQ502W6 1294 aa19.12■□□□□ 0.65
SNX4-204ENST00000473417 TCP11X2Q5H9J9 407 aa19.12■□□□□ 0.65
SNX4-204ENST00000473417 CC2D1AQ6P1N0 951 aaPredicted RBP19.12■□□□□ 0.65
SNX4-204ENST00000473417 ERMP1Q7Z2K6 904 aa19.12■□□□□ 0.65
SNX4-204ENST00000473417 PPM1KQ8N3J5 372 aa19.12■□□□□ 0.65
SNX4-204ENST00000473417 SYNPOQ8N3V7 929 aa19.12■□□□□ 0.65
SNX4-204ENST00000473417 C8orf48Q96LL4 319 aa19.12■□□□□ 0.65
SNX4-204ENST00000473417 CYP2S1Q96SQ9 504 aa19.12■□□□□ 0.65
SNX4-204ENST00000473417 INTS2Q9H0H0 1204 aaKnown RBP19.12■□□□□ 0.65
SNX4-204ENST00000473417 FAM49BQ9NUQ9 324 aa19.12■□□□□ 0.65
SNX4-204ENST00000473417 TMEM30AQ9NV96 361 aa19.12■□□□□ 0.65
SNX4-204ENST00000473417 SMG5Q9UPR3 1016 aaKnown RBP19.12■□□□□ 0.65
SNX4-204ENST00000473417 SPAG17Q6Q759 2223 aa19.12■□□□□ 0.65
SNX4-204ENST00000473417 DNAH14Q0VDD8 3507 aa19.11■□□□□ 0.65
SNX4-204ENST00000473417 CCDC130P13994 396 aa19.11■□□□□ 0.65
SNX4-204ENST00000473417 ARSAP15289 507 aa19.11■□□□□ 0.65
SNX4-204ENST00000473417 TCF3P15923 654 aa19.11■□□□□ 0.65
SNX4-204ENST00000473417 CACNA2D1P54289 1103 aa19.11■□□□□ 0.65
SNX4-204ENST00000473417 PDGFRLQ15198 375 aa19.11■□□□□ 0.65
SNX4-204ENST00000473417 RRAGAQ7L523 313 aa19.11■□□□□ 0.65
SNX4-204ENST00000473417 ARHGEF19Q8IW93 802 aa19.11■□□□□ 0.65
SNX4-204ENST00000473417 KIAA2013Q8IYS2 634 aa19.11■□□□□ 0.65
SNX4-204ENST00000473417 DCLK2Q8N568 766 aa19.11■□□□□ 0.65
SNX4-204ENST00000473417 ARL14EPQ8N8R7 260 aaPredicted RBP19.11■□□□□ 0.65
SNX4-204ENST00000473417 C12orf29Q8N999 325 aa19.11■□□□□ 0.65
SNX4-204ENST00000473417 KAT5Q92993 513 aa19.11■□□□□ 0.65
SNX4-204ENST00000473417 NAT10Q9H0A0 1025 aaKnown RBP19.11■□□□□ 0.65
SNX4-204ENST00000473417 NDST4Q9H3R1 872 aa19.11■□□□□ 0.65
SNX4-204ENST00000473417 TAB2Q9NYJ8 693 aa19.11■□□□□ 0.65
SNX4-204ENST00000473417 EHD2Q9NZN4 543 aa19.11■□□□□ 0.65
SNX4-204ENST00000473417 K7ESF4 209 aa19.1■□□□□ 0.65
SNX4-204ENST00000473417 PES1O00541 588 aaKnown RBP19.1■□□□□ 0.65
SNX4-204ENST00000473417 PFKLP17858 780 aa19.1■□□□□ 0.65
SNX4-204ENST00000473417 TRIM21P19474 475 aaKnown RBP19.1■□□□□ 0.65
SNX4-204ENST00000473417 TBXAS1P24557 533 aaPredicted RBP19.1■□□□□ 0.65
SNX4-204ENST00000473417 EEF1GP26641 437 aaKnown RBP19.1■□□□□ 0.65
SNX4-204ENST00000473417 PDE6CP51160 858 aa19.1■□□□□ 0.65
SNX4-204ENST00000473417 TMEM196Q5HYL7 178 aa19.1■□□□□ 0.65
SNX4-204ENST00000473417 MIIPQ5JXC2 388 aa19.1■□□□□ 0.65
SNX4-204ENST00000473417 CDKAL1Q5VV42 579 aa19.1■□□□□ 0.65
SNX4-204ENST00000473417 GBP6Q6ZN66 633 aa19.1■□□□□ 0.65
SNX4-204ENST00000473417 PAQR9Q6ZVX9 377 aa19.1■□□□□ 0.65
SNX4-204ENST00000473417 FAM35AQ86V20 835 aa19.1■□□□□ 0.65
SNX4-204ENST00000473417 FUKQ8N0W3 1084 aa19.1■□□□□ 0.65
SNX4-204ENST00000473417 TTC39CQ8N584 583 aa19.1■□□□□ 0.65
SNX4-204ENST00000473417 AOPEPQ8N6M6 819 aa19.1■□□□□ 0.65
SNX4-204ENST00000473417 SLC2A14Q8TDB8 520 aa19.1■□□□□ 0.65
SNX4-204ENST00000473417 HEXIM2Q96MH2 286 aaKnown RBP19.1■□□□□ 0.65
SNX4-204ENST00000473417 FUCA2Q9BTY2 467 aa19.1■□□□□ 0.65
SNX4-204ENST00000473417 ARHGAP26Q9UNA1 814 aa19.1■□□□□ 0.65
SNX4-204ENST00000473417 ATP8B3O60423 1300 aa19.09■□□□□ 0.65
Retrieved 100 of 20,778 RNA–protein pairs in 28.8 ms