RNA–Protein interactions for RNA: ENST00000473214.1

RTF1-203, Transcript of RTF1 homolog, Paf1/RNA polymerase II complex component, humanhuman

TSL 2

Gene RTF1, Length 475 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTF1-203ENST00000473214 MTFMTQ96DP5 389 aaKnown RBP6.38□□□□□ -1.39
RTF1-203ENST00000473214 SIPA1Q96FS4 1042 aa6.38□□□□□ -1.39
RTF1-203ENST00000473214 VPS50Q96JG6 964 aa6.38□□□□□ -1.39
RTF1-203ENST00000473214 ZPBPQ9BS86 351 aa6.38□□□□□ -1.39
RTF1-203ENST00000473214 TACO1Q9BSH4 297 aaKnown RBP6.38□□□□□ -1.39
RTF1-203ENST00000473214 FUT8Q9BYC5 575 aa6.38□□□□□ -1.39
RTF1-203ENST00000473214 ZMAT4Q9H898 229 aa6.38□□□□□ -1.39
RTF1-203ENST00000473214 MID1IP1Q9NPA3 183 aa6.38□□□□□ -1.39
RTF1-203ENST00000473214 CACNA2D2Q9NY47 1150 aa6.38□□□□□ -1.39
RTF1-203ENST00000473214 TAS2R3Q9NYW6 316 aa6.38□□□□□ -1.39
RTF1-203ENST00000473214 C5AR2Q9P296 337 aa6.38□□□□□ -1.39
RTF1-203ENST00000473214 CLIP2Q9UDT6 1046 aa6.38□□□□□ -1.39
RTF1-203ENST00000473214 SMG5Q9UPR3 1016 aaKnown RBP6.38□□□□□ -1.39
RTF1-203ENST00000473214 KLHL20Q9Y2M5 609 aa6.38□□□□□ -1.39
RTF1-203ENST00000473214 MRPL11Q9Y3B7 192 aaKnown RBP6.38□□□□□ -1.39
RTF1-203ENST00000473214 PSAT1Q9Y617 370 aa6.38□□□□□ -1.39
RTF1-203ENST00000473214 IL16Q14005 1332 aa6.38□□□□□ -1.39
RTF1-203ENST00000473214 DCCP43146 1447 aa6.38□□□□□ -1.39
RTF1-203ENST00000473214 LMTK2Q8IWU2 1503 aa6.38□□□□□ -1.39
RTF1-203ENST00000473214 C1orf167Q5SNV9 1468 aa6.37□□□□□ -1.39
RTF1-203ENST00000473214 PTCH1Q13635 1447 aa6.37□□□□□ -1.39
RTF1-203ENST00000473214 KIF15Q9NS87 1388 aa6.37□□□□□ -1.39
RTF1-203ENST00000473214 SYNGAP1Q96PV0 1343 aa6.37□□□□□ -1.39
RTF1-203ENST00000473214 CYP2D7A0A087X1C5 515 aa6.37□□□□□ -1.39
RTF1-203ENST00000473214 DCDC2CA8MYV0 355 aa6.37□□□□□ -1.39
RTF1-203ENST00000473214 MYO1FO00160 1098 aa6.37□□□□□ -1.39
RTF1-203ENST00000473214 POLR3GO15318 223 aaPredicted RBP6.37□□□□□ -1.39
RTF1-203ENST00000473214 ASNA1O43681 348 aa6.37□□□□□ -1.39
RTF1-203ENST00000473214 MSCO60682 206 aa6.37□□□□□ -1.39
RTF1-203ENST00000473214 FARP2O94887 1054 aaPredicted RBP6.37□□□□□ -1.39
RTF1-203ENST00000473214 EPN2O95208 641 aa6.37□□□□□ -1.39
RTF1-203ENST00000473214 GGPS1O95749 300 aa6.37□□□□□ -1.39
RTF1-203ENST00000473214 PAHP00439 452 aa6.37□□□□□ -1.39
RTF1-203ENST00000473214 IFNB1P01574 187 aa6.37□□□□□ -1.39
RTF1-203ENST00000473214 ITGA2BP08514 1039 aa6.37□□□□□ -1.39
RTF1-203ENST00000473214 LAMP2P13473 410 aa6.37□□□□□ -1.39
RTF1-203ENST00000473214 CD40P25942 277 aa6.37□□□□□ -1.39
RTF1-203ENST00000473214 RDXP35241 583 aaKnown RBP6.37□□□□□ -1.39
RTF1-203ENST00000473214 GP5P40197 560 aa6.37□□□□□ -1.39
RTF1-203ENST00000473214 DDR1Q08345 913 aa6.37□□□□□ -1.39
RTF1-203ENST00000473214 KIF5AQ12840 1032 aa6.37□□□□□ -1.39
RTF1-203ENST00000473214 SP140Q13342 867 aa6.37□□□□□ -1.39
RTF1-203ENST00000473214 LASP1Q14847 261 aaKnown RBP6.37□□□□□ -1.39
RTF1-203ENST00000473214 IMMTQ16891 758 aaKnown RBP6.37□□□□□ -1.39
RTF1-203ENST00000473214 ZNF805Q5CZA5 627 aa6.37□□□□□ -1.39
RTF1-203ENST00000473214 TCP11X2Q5H9J9 407 aa6.37□□□□□ -1.39
RTF1-203ENST00000473214 PRAMEF14Q5SWL7 426 aa6.37□□□□□ -1.39
RTF1-203ENST00000473214 NOL9Q5SY16 702 aaKnown RBP6.37□□□□□ -1.39
RTF1-203ENST00000473214 ATG16L1Q676U5 607 aa6.37□□□□□ -1.39
RTF1-203ENST00000473214 CYP4F22Q6NT55 531 aa6.37□□□□□ -1.39
RTF1-203ENST00000473214 ARHGAP11AQ6P4F7 1023 aa6.37□□□□□ -1.39
RTF1-203ENST00000473214 MEX3BQ6ZN04 569 aaKnown RBP6.37□□□□□ -1.39
RTF1-203ENST00000473214 BBS12Q6ZW61 710 aa6.37□□□□□ -1.39
RTF1-203ENST00000473214 CYFIP1Q7L576 1253 aa6.37□□□□□ -1.39
RTF1-203ENST00000473214 TMEM151BQ8IW70 566 aa6.37□□□□□ -1.39
RTF1-203ENST00000473214 ZBTB8BQ8NAP8 495 aaPredicted RBP6.37□□□□□ -1.39
RTF1-203ENST00000473214 KREMEN2Q8NCW0 462 aa6.37□□□□□ -1.39
RTF1-203ENST00000473214 RASSF8Q8NHQ8 419 aa6.37□□□□□ -1.39
RTF1-203ENST00000473214 RFWD2Q8NHY2 731 aa6.37□□□□□ -1.39
RTF1-203ENST00000473214 PANK1Q8TE04 598 aa6.37□□□□□ -1.39
RTF1-203ENST00000473214 RNF139Q8WU17 664 aa6.37□□□□□ -1.39
RTF1-203ENST00000473214 NEIL1Q96FI4 390 aaPredicted RBP6.37□□□□□ -1.39
RTF1-203ENST00000473214 COG3Q96JB2 828 aa6.37□□□□□ -1.39
RTF1-203ENST00000473214 MSLNLQ96KJ4 702 aa6.37□□□□□ -1.39
RTF1-203ENST00000473214 PTPN18Q99952 460 aa6.37□□□□□ -1.39
RTF1-203ENST00000473214 ACE2Q9BYF1 805 aaPredicted RBP6.37□□□□□ -1.39
RTF1-203ENST00000473214 ANO3Q9BYT9 981 aa6.37□□□□□ -1.39
RTF1-203ENST00000473214 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP6.37□□□□□ -1.39
RTF1-203ENST00000473214 RNPEPQ9H4A4 650 aa6.37□□□□□ -1.39
RTF1-203ENST00000473214 TAF1DQ9H5J8 278 aaPredicted RBP6.37□□□□□ -1.39
RTF1-203ENST00000473214 OPA3Q9H6K4 179 aa6.37□□□□□ -1.39
RTF1-203ENST00000473214 RAD18Q9NS91 495 aa6.37□□□□□ -1.39
RTF1-203ENST00000473214 CATSPERZQ9NTU4 200 aa6.37□□□□□ -1.39
RTF1-203ENST00000473214 MSRAQ9UJ68 235 aa6.37□□□□□ -1.39
RTF1-203ENST00000473214 AP4E1Q9UPM8 1137 aa6.37□□□□□ -1.39
RTF1-203ENST00000473214 PCDHB12Q9Y5F1 795 aa6.37□□□□□ -1.39
RTF1-203ENST00000473214 SPHKAPQ2M3C7 1700 aa6.36□□□□□ -1.39
RTF1-203ENST00000473214 TNKS1BP1Q9C0C2 1729 aaKnown RBP6.36□□□□□ -1.39
RTF1-203ENST00000473214 GIMAP1-GIMAP5A0A087WTJ2 511 aa6.36□□□□□ -1.39
RTF1-203ENST00000473214 A8MV72 311 aaPredicted RBP6.36□□□□□ -1.39
RTF1-203ENST00000473214 A8MXE2 369 aa6.36□□□□□ -1.39
RTF1-203ENST00000473214 KIF2AO00139 706 aaPredicted RBP6.36□□□□□ -1.39
RTF1-203ENST00000473214 ADAM20O43506 726 aa6.36□□□□□ -1.39
RTF1-203ENST00000473214 TBC1D4O60343 1298 aa6.36□□□□□ -1.39
RTF1-203ENST00000473214 REC8O95072 547 aa6.36□□□□□ -1.39
RTF1-203ENST00000473214 PNPP00491 289 aa6.36□□□□□ -1.39
RTF1-203ENST00000473214 LRG1P02750 347 aa6.36□□□□□ -1.39
RTF1-203ENST00000473214 TUBB4AP04350 444 aa6.36□□□□□ -1.39
RTF1-203ENST00000473214 GCH1P30793 250 aa6.36□□□□□ -1.39
RTF1-203ENST00000473214 TCF7P36402 384 aaPredicted RBP6.36□□□□□ -1.39
RTF1-203ENST00000473214 MTIF2P46199 727 aaKnown RBP6.36□□□□□ -1.39
RTF1-203ENST00000473214 CENPAP49450 140 aa6.36□□□□□ -1.39
RTF1-203ENST00000473214 IRF9Q00978 393 aa6.36□□□□□ -1.39
RTF1-203ENST00000473214 BEX3Q00994 111 aa6.36□□□□□ -1.39
RTF1-203ENST00000473214 CYP4F3Q08477 520 aa6.36□□□□□ -1.39
RTF1-203ENST00000473214 RPA4Q13156 261 aa6.36□□□□□ -1.39
RTF1-203ENST00000473214 CUL2Q13617 745 aa6.36□□□□□ -1.39
RTF1-203ENST00000473214 BMPR2Q13873 1038 aa6.36□□□□□ -1.39
RTF1-203ENST00000473214 MORF4L2Q15014 288 aa6.36□□□□□ -1.39
RTF1-203ENST00000473214 GPR68Q15743 365 aa6.36□□□□□ -1.39
Retrieved 100 of 20,778 RNA–protein pairs in 25.4 ms