RNA–Protein interactions for RNA: ENST00000472679.1

CLK1-209, Transcript of CDC like kinase 1, humanhuman

TSL 2

Gene CLK1, Length 461 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK1-209ENST00000472679 ACRBPQ8NEB7 543 aa6.74□□□□□ -1.33
CLK1-209ENST00000472679 C18orf8Q96DM3 657 aa6.74□□□□□ -1.33
CLK1-209ENST00000472679 SELENOOQ9BVL4 669 aa6.74□□□□□ -1.33
CLK1-209ENST00000472679 DNAJB11Q9UBS4 358 aa6.74□□□□□ -1.33
CLK1-209ENST00000472679 USP22Q9UPT9 525 aa6.74□□□□□ -1.33
CLK1-209ENST00000472679 POLR2AP24928 1970 aaKnown RBP6.74□□□□□ -1.33
CLK1-209ENST00000472679 WDR33Q9C0J8 1336 aaKnown RBP6.74□□□□□ -1.33
CLK1-209ENST00000472679 FAM234BA2RU67 622 aa6.73□□□□□ -1.33
CLK1-209ENST00000472679 H0YIZ8 118 aa6.73□□□□□ -1.33
CLK1-209ENST00000472679 PEX14O75381 377 aa6.73□□□□□ -1.33
CLK1-209ENST00000472679 LMNAP02545 664 aaKnown RBP6.73□□□□□ -1.33
CLK1-209ENST00000472679 ENGP17813 658 aa6.73□□□□□ -1.33
CLK1-209ENST00000472679 CTGFP29279 349 aa6.73□□□□□ -1.33
CLK1-209ENST00000472679 PPM1AP35813 382 aa6.73□□□□□ -1.33
CLK1-209ENST00000472679 IL6STP40189 918 aaPredicted RBP6.73□□□□□ -1.33
CLK1-209ENST00000472679 TIRAPP58753 221 aa6.73□□□□□ -1.33
CLK1-209ENST00000472679 TSTD2Q5T7W7 516 aa6.73□□□□□ -1.33
CLK1-209ENST00000472679 Q6ZWC4 215 aa6.73□□□□□ -1.33
CLK1-209ENST00000472679 RASAL3Q86YV0 1011 aa6.73□□□□□ -1.33
CLK1-209ENST00000472679 METTL25Q8N6Q8 603 aa6.73□□□□□ -1.33
CLK1-209ENST00000472679 C11orf44Q8N8P7 122 aa6.73□□□□□ -1.33
CLK1-209ENST00000472679 CCDC150Q8NCX0 1101 aa6.73□□□□□ -1.33
CLK1-209ENST00000472679 FAM227BQ96M60 508 aa6.73□□□□□ -1.33
CLK1-209ENST00000472679 HIST1H2AAQ96QV6 131 aa6.73□□□□□ -1.33
CLK1-209ENST00000472679 HAPLN3Q96S86 360 aa6.73□□□□□ -1.33
CLK1-209ENST00000472679 VN1R3Q9BXE9 311 aa6.73□□□□□ -1.33
CLK1-209ENST00000472679 PRDM13Q9H4Q3 707 aa6.73□□□□□ -1.33
CLK1-209ENST00000472679 RIMKLBQ9ULI2 386 aa6.73□□□□□ -1.33
CLK1-209ENST00000472679 GABRQQ9UN88 632 aa6.73□□□□□ -1.33
CLK1-209ENST00000472679 PLA2G6O60733 806 aa6.72□□□□□ -1.33
CLK1-209ENST00000472679 SETSIPP0DME0 302 aa6.72□□□□□ -1.33
CLK1-209ENST00000472679 ARP10275 920 aa6.72□□□□□ -1.33
CLK1-209ENST00000472679 NDUFB7P17568 137 aa6.72□□□□□ -1.33
CLK1-209ENST00000472679 ITPKBP27987 946 aa6.72□□□□□ -1.33
CLK1-209ENST00000472679 CCT8P50990 548 aa6.72□□□□□ -1.33
CLK1-209ENST00000472679 CACNA2D1P54289 1103 aa6.72□□□□□ -1.33
CLK1-209ENST00000472679 E2F1Q01094 437 aa6.72□□□□□ -1.33
CLK1-209ENST00000472679 CCDC28AQ8IWP9 274 aa6.72□□□□□ -1.33
CLK1-209ENST00000472679 CAGE1Q8TC20 777 aa6.72□□□□□ -1.33
CLK1-209ENST00000472679 SNX27Q96L92 541 aa6.72□□□□□ -1.33
CLK1-209ENST00000472679 PRR25Q96S07 402 aa6.72□□□□□ -1.33
CLK1-209ENST00000472679 INO80BQ9C086 356 aaPredicted RBP6.72□□□□□ -1.33
CLK1-209ENST00000472679 PCDHAC1Q9H158 963 aa6.72□□□□□ -1.33
CLK1-209ENST00000472679 SLC25A32Q9H2D1 315 aa6.72□□□□□ -1.33
CLK1-209ENST00000472679 DUSP22Q9NRW4 184 aa6.72□□□□□ -1.33
CLK1-209ENST00000472679 RGL1Q9NZL6 768 aa6.72□□□□□ -1.33
CLK1-209ENST00000472679 CCNL1Q9UK58 526 aaPredicted RBP6.72□□□□□ -1.33
CLK1-209ENST00000472679 TLK1Q9UKI8 766 aa6.72□□□□□ -1.33
CLK1-209ENST00000472679 ZMYND8Q9ULU4 1186 aaPredicted RBP6.72□□□□□ -1.33
CLK1-209ENST00000472679 CEP83Q9Y592 693 aa6.72□□□□□ -1.33
CLK1-209ENST00000472679 ABHD14A-ACY1A0A1B0GW23 586 aa6.71□□□□□ -1.34
CLK1-209ENST00000472679 AP4M1O00189 453 aa6.71□□□□□ -1.34
CLK1-209ENST00000472679 ORC4O43929 436 aa6.71□□□□□ -1.34
CLK1-209ENST00000472679 YY1P25490 414 aa6.71□□□□□ -1.34
CLK1-209ENST00000472679 HMGA2P52926 109 aa6.71□□□□□ -1.34
CLK1-209ENST00000472679 TPTEP56180 551 aa6.71□□□□□ -1.34
CLK1-209ENST00000472679 ERCC6LQ2NKX8 1250 aa6.71□□□□□ -1.34
CLK1-209ENST00000472679 MZT2AQ6P582 158 aa6.71□□□□□ -1.34
CLK1-209ENST00000472679 CLEC9AQ6UXN8 241 aa6.71□□□□□ -1.34
CLK1-209ENST00000472679 PARS2Q7L3T8 475 aaKnown RBP6.71□□□□□ -1.34
CLK1-209ENST00000472679 PMM1Q92871 262 aa6.71□□□□□ -1.34
CLK1-209ENST00000472679 WDYHV1Q96HA8 205 aa6.71□□□□□ -1.34
CLK1-209ENST00000472679 ZNF668Q96K58 619 aaPredicted RBP6.71□□□□□ -1.34
CLK1-209ENST00000472679 RPS6KC1Q96S38 1066 aa6.71□□□□□ -1.34
CLK1-209ENST00000472679 DUSP26Q9BV47 211 aa6.71□□□□□ -1.34
CLK1-209ENST00000472679 DPCDQ9BVM2 203 aaPredicted RBP6.71□□□□□ -1.34
CLK1-209ENST00000472679 KRTAP4-11Q9BYQ6 195 aa6.71□□□□□ -1.34
CLK1-209ENST00000472679 DDX24Q9GZR7 859 aaKnown RBP eCLIP6.71□□□□□ -1.34
CLK1-209ENST00000472679 KLK15Q9H2R5 256 aa6.71□□□□□ -1.34
CLK1-209ENST00000472679 ASB6Q9NWX5 421 aa6.71□□□□□ -1.34
CLK1-209ENST00000472679 LPAR3Q9UBY5 353 aa6.71□□□□□ -1.34
CLK1-209ENST00000472679 ADAM21Q9UKJ8 722 aa6.71□□□□□ -1.34
CLK1-209ENST00000472679 SLC27A6Q9Y2P4 619 aa6.71□□□□□ -1.34
CLK1-209ENST00000472679 ENTPD2Q9Y5L3 495 aa6.71□□□□□ -1.34
CLK1-209ENST00000472679 EXOC5O00471 708 aa6.7□□□□□ -1.34
CLK1-209ENST00000472679 PODXLO00592 558 aa6.7□□□□□ -1.34
CLK1-209ENST00000472679 PMPCBO75439 489 aa6.7□□□□□ -1.34
CLK1-209ENST00000472679 FAM163BP0C2L3 166 aa6.7□□□□□ -1.34
CLK1-209ENST00000472679 PECAM1P16284 738 aaPredicted RBP6.7□□□□□ -1.34
CLK1-209ENST00000472679 DRD4P21917 467 aa6.7□□□□□ -1.34
CLK1-209ENST00000472679 MST1P26927 711 aa6.7□□□□□ -1.34
CLK1-209ENST00000472679 GKP32189 559 aa6.7□□□□□ -1.34
CLK1-209ENST00000472679 MTHFSP49914 203 aa6.7□□□□□ -1.34
CLK1-209ENST00000472679 BTKQ06187 659 aa6.7□□□□□ -1.34
CLK1-209ENST00000472679 BIRC2Q13490 618 aa6.7□□□□□ -1.34
CLK1-209ENST00000472679 MORC3Q14149 939 aa6.7□□□□□ -1.34
CLK1-209ENST00000472679 KRTAP15-1Q3LI76 137 aa6.7□□□□□ -1.34
CLK1-209ENST00000472679 EEF1AKMT2Q5JPI9 291 aaKnown RBP6.7□□□□□ -1.34
CLK1-209ENST00000472679 FAXCQ5TGI0 409 aa6.7□□□□□ -1.34
CLK1-209ENST00000472679 ANKRD16Q6P6B7 361 aa6.7□□□□□ -1.34
CLK1-209ENST00000472679 WDR53Q7Z5U6 358 aaPredicted RBP6.7□□□□□ -1.34
CLK1-209ENST00000472679 VPS37AQ8NEZ2 397 aa6.7□□□□□ -1.34
CLK1-209ENST00000472679 RP9Q8TA86 221 aaKnown RBP6.7□□□□□ -1.34
CLK1-209ENST00000472679 CYP2W1Q8TAV3 490 aa6.7□□□□□ -1.34
CLK1-209ENST00000472679 ZNF384Q8TF68 577 aa6.7□□□□□ -1.34
CLK1-209ENST00000472679 CTHRC1Q96CG8 243 aa6.7□□□□□ -1.34
CLK1-209ENST00000472679 RSPRY1Q96DX4 576 aa6.7□□□□□ -1.34
CLK1-209ENST00000472679 ZDHHC12Q96GR4 267 aa6.7□□□□□ -1.34
CLK1-209ENST00000472679 LENG8Q96PV6 779 aaPredicted RBP6.7□□□□□ -1.34
CLK1-209ENST00000472679 WDR12Q9GZL7 423 aaKnown RBP6.7□□□□□ -1.34
Retrieved 100 of 20,778 RNA–protein pairs in 17 ms