RNA–Protein interactions for RNA: ENST00000472585.1

VCL-204, Transcript of vinculin, humanhuman

TSL 2

Gene VCL, Length 556 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCL-204ENST00000472585 HUS1O60921 280 aa9.97□□□□□ -0.81
VCL-204ENST00000472585 IL18RAPO95256 599 aa9.97□□□□□ -0.81
VCL-204ENST00000472585 KLF8O95600 359 aaPredicted RBP9.97□□□□□ -0.81
VCL-204ENST00000472585 KRT18P05783 430 aaKnown RBP9.97□□□□□ -0.81
VCL-204ENST00000472585 FTH1P19P0C7X4 201 aa9.97□□□□□ -0.81
VCL-204ENST00000472585 BDNFP23560 247 aa9.97□□□□□ -0.81
VCL-204ENST00000472585 ITPKAP23677 461 aa9.97□□□□□ -0.81
VCL-204ENST00000472585 DHCR24Q15392 516 aa9.97□□□□□ -0.81
VCL-204ENST00000472585 FILIP1Q7Z7B0 1213 aa9.97□□□□□ -0.81
VCL-204ENST00000472585 NT5DC4Q86YG4 428 aa9.97□□□□□ -0.81
VCL-204ENST00000472585 SPATA2LQ8IUW3 424 aaPredicted RBP9.97□□□□□ -0.81
VCL-204ENST00000472585 BRSK2Q8IWQ3 736 aa9.97□□□□□ -0.81
VCL-204ENST00000472585 DEFB119Q8N690 84 aa9.97□□□□□ -0.81
VCL-204ENST00000472585 PNPLA1Q8N8W4 532 aa9.97□□□□□ -0.81
VCL-204ENST00000472585 OR5B17Q8NGF7 314 aa9.97□□□□□ -0.81
VCL-204ENST00000472585 OR2I1PQ8NGU4 316 aa9.97□□□□□ -0.81
VCL-204ENST00000472585 LARP4BQ92615 738 aaKnown RBP9.97□□□□□ -0.81
VCL-204ENST00000472585 MYLPFQ96A32 169 aa9.97□□□□□ -0.81
VCL-204ENST00000472585 CALML4Q96GE6 196 aa9.97□□□□□ -0.81
VCL-204ENST00000472585 UBL7Q96S82 380 aaPredicted RBP9.97□□□□□ -0.81
VCL-204ENST00000472585 CBWD1Q9BRT8 395 aa9.97□□□□□ -0.81
VCL-204ENST00000472585 PCIF1Q9H4Z3 704 aa9.97□□□□□ -0.81
VCL-204ENST00000472585 CELSR3Q9NYQ7 3312 aa9.97□□□□□ -0.81
VCL-204ENST00000472585 TENM4Q6N022 2769 aa9.97□□□□□ -0.81
VCL-204ENST00000472585 TULP1O00294 542 aaPredicted RBP9.96□□□□□ -0.82
VCL-204ENST00000472585 ARHGAP33O14559 1287 aa9.96□□□□□ -0.82
VCL-204ENST00000472585 TRIM24O15164 1050 aa9.96□□□□□ -0.82
VCL-204ENST00000472585 SH3BP5O60239 455 aa9.96□□□□□ -0.82
VCL-204ENST00000472585 OLFM2O95897 454 aa9.96□□□□□ -0.82
VCL-204ENST00000472585 PDGFRBP09619 1106 aa9.96□□□□□ -0.82
VCL-204ENST00000472585 CD59P13987 128 aa9.96□□□□□ -0.82
VCL-204ENST00000472585 GJB2P29033 226 aa9.96□□□□□ -0.82
VCL-204ENST00000472585 PNPLA4P41247 253 aa9.96□□□□□ -0.82
VCL-204ENST00000472585 MAGEA11P43364 429 aa9.96□□□□□ -0.82
VCL-204ENST00000472585 SLC7A9P82251 487 aa9.96□□□□□ -0.82
VCL-204ENST00000472585 MRPS21P82921 87 aaKnown RBP9.96□□□□□ -0.82
VCL-204ENST00000472585 MYL7Q01449 175 aa9.96□□□□□ -0.82
VCL-204ENST00000472585 RPL6Q02878 288 aaKnown RBP9.96□□□□□ -0.82
VCL-204ENST00000472585 SLC14A1Q13336 389 aa9.96□□□□□ -0.82
VCL-204ENST00000472585 PEAR1Q5VY43 1037 aaPredicted RBP9.96□□□□□ -0.82
VCL-204ENST00000472585 MIB1Q86YT6 1006 aa9.96□□□□□ -0.82
VCL-204ENST00000472585 ADGRF2Q8IZF7 708 aa9.96□□□□□ -0.82
VCL-204ENST00000472585 TMEM86AQ8N2M4 240 aa9.96□□□□□ -0.82
VCL-204ENST00000472585 TOP6BLQ8N6T0 577 aa9.96□□□□□ -0.82
VCL-204ENST00000472585 LRRC52Q8N7C0 313 aa9.96□□□□□ -0.82
VCL-204ENST00000472585 HMGB4Q8WW32 186 aa9.96□□□□□ -0.82
VCL-204ENST00000472585 FUBP3Q96I24 572 aaKnown RBP eCLIP9.96□□□□□ -0.82
VCL-204ENST00000472585 ZFRQ96KR1 1074 aaKnown RBP9.96□□□□□ -0.82
VCL-204ENST00000472585 SPATA17Q96L03 361 aa9.96□□□□□ -0.82
VCL-204ENST00000472585 ZNF560Q96MR9 790 aa9.96□□□□□ -0.82
VCL-204ENST00000472585 CAMK1GQ96NX5 476 aa9.96□□□□□ -0.82
VCL-204ENST00000472585 MRPL45Q9BRJ2 306 aaKnown RBP9.96□□□□□ -0.82
VCL-204ENST00000472585 TTLL2Q9BWV7 592 aa9.96□□□□□ -0.82
VCL-204ENST00000472585 MTMR12Q9C0I1 747 aa9.96□□□□□ -0.82
VCL-204ENST00000472585 CD248Q9HCU0 757 aa9.96□□□□□ -0.82
VCL-204ENST00000472585 SMPD4Q9NXE4 827 aa9.96□□□□□ -0.82
VCL-204ENST00000472585 CACNA2D2Q9NY47 1150 aa9.96□□□□□ -0.82
VCL-204ENST00000472585 ANAPC1Q9H1A4 1944 aa9.95□□□□□ -0.82
VCL-204ENST00000472585 TK2O00142 265 aa9.95□□□□□ -0.82
VCL-204ENST00000472585 TBCAO75347 108 aaKnown RBP9.95□□□□□ -0.82
VCL-204ENST00000472585 KAT7O95251 611 aa9.95□□□□□ -0.82
VCL-204ENST00000472585 NFATC1O95644 943 aa9.95□□□□□ -0.82
VCL-204ENST00000472585 OAS1P00973 400 aaKnown RBP9.95□□□□□ -0.82
VCL-204ENST00000472585 CST3P01034 146 aaPredicted RBP9.95□□□□□ -0.82
VCL-204ENST00000472585 PRB1P04280 392 aa9.95□□□□□ -0.82
VCL-204ENST00000472585 KRT19P08727 400 aa9.95□□□□□ -0.82
VCL-204ENST00000472585 HOXD13P35453 343 aa9.95□□□□□ -0.82
VCL-204ENST00000472585 LONP1P36776 959 aaKnown RBP9.95□□□□□ -0.82
VCL-204ENST00000472585 GRIK1P39086 918 aa9.95□□□□□ -0.82
VCL-204ENST00000472585 LHX1P48742 406 aa9.95□□□□□ -0.82
VCL-204ENST00000472585 PGFP49763 221 aa9.95□□□□□ -0.82
VCL-204ENST00000472585 RBP5P82980 135 aa9.95□□□□□ -0.82
VCL-204ENST00000472585 KCNB1Q14721 858 aa9.95□□□□□ -0.82
VCL-204ENST00000472585 POSTNQ15063 836 aa9.95□□□□□ -0.82
VCL-204ENST00000472585 SF3A1Q15459 793 aaKnown RBP9.95□□□□□ -0.82
VCL-204ENST00000472585 HSF5Q4G112 596 aaPredicted RBP9.95□□□□□ -0.82
VCL-204ENST00000472585 EOGTQ5NDL2 527 aa9.95□□□□□ -0.82
VCL-204ENST00000472585 L1TD1Q5T7N2 865 aaKnown RBP9.95□□□□□ -0.82
VCL-204ENST00000472585 SLC36A4Q6YBV0 504 aa9.95□□□□□ -0.82
VCL-204ENST00000472585 DENND5BQ6ZUT9 1274 aa9.95□□□□□ -0.82
VCL-204ENST00000472585 TOGARAM2Q6ZUX3 1019 aa9.95□□□□□ -0.82
VCL-204ENST00000472585 ZNF605Q86T29 641 aa9.95□□□□□ -0.82
VCL-204ENST00000472585 SLC41A1Q8IVJ1 513 aa9.95□□□□□ -0.82
VCL-204ENST00000472585 PCED1BQ96HM7 432 aa9.95□□□□□ -0.82
VCL-204ENST00000472585 TMX3Q96JJ7 454 aa9.95□□□□□ -0.82
VCL-204ENST00000472585 CLIC6Q96NY7 704 aa9.95□□□□□ -0.82
VCL-204ENST00000472585 PNKPQ96T60 521 aa9.95□□□□□ -0.82
VCL-204ENST00000472585 SYT15Q9BQS2 421 aa9.95□□□□□ -0.82
VCL-204ENST00000472585 GZF1Q9H116 711 aaPredicted RBP9.95□□□□□ -0.82
VCL-204ENST00000472585 CAPN10Q9HC96 672 aa9.95□□□□□ -0.82
VCL-204ENST00000472585 CD93Q9NPY3 652 aa9.95□□□□□ -0.82
VCL-204ENST00000472585 DNAAF2Q9NVR5 837 aaKnown RBP9.95□□□□□ -0.82
VCL-204ENST00000472585 RBAKQ9NYW8 714 aaPredicted RBP9.95□□□□□ -0.82
VCL-204ENST00000472585 MAGEC2Q9UBF1 373 aaPredicted RBP9.95□□□□□ -0.82
VCL-204ENST00000472585 CPQQ9Y646 472 aa9.95□□□□□ -0.82
VCL-204ENST00000472585 CLIC4Q9Y696 253 aa9.95□□□□□ -0.82
VCL-204ENST00000472585 PCDH15Q96QU1 1955 aa9.94□□□□□ -0.82
VCL-204ENST00000472585 HELZP42694 1942 aaKnown RBP9.94□□□□□ -0.82
VCL-204ENST00000472585 A0A087X0B3 334 aa9.94□□□□□ -0.82
VCL-204ENST00000472585 FRMD3A2A2Y4 597 aa9.94□□□□□ -0.82
Retrieved 100 of 20,778 RNA–protein pairs in 41.1 ms