RNA–Protein interactions for RNA: ENST00000472479.1

UBE2F-220, Transcript of ubiquitin conjugating enzyme E2 F (putative), humanhuman

TSL 2

Gene UBE2F, Length 1,458 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2F-220ENST00000472479 SLC4A5Q9BY07 1137 aa11.07□□□□□ -0.64
UBE2F-220ENST00000472479 PNPLA8Q9NP80 782 aa11.07□□□□□ -0.64
UBE2F-220ENST00000472479 CYLDQ9NQC7 956 aa11.07□□□□□ -0.64
UBE2F-220ENST00000472479 ASAH2Q9NR71 780 aa11.07□□□□□ -0.64
UBE2F-220ENST00000472479 ZDHHC7Q9NXF8 308 aa11.07□□□□□ -0.64
UBE2F-220ENST00000472479 CNOT8Q9UFF9 292 aaKnown RBP11.07□□□□□ -0.64
UBE2F-220ENST00000472479 CHORDC1Q9UHD1 332 aaPredicted RBP11.07□□□□□ -0.64
UBE2F-220ENST00000472479 CYTH4Q9UIA0 394 aa11.07□□□□□ -0.64
UBE2F-220ENST00000472479 VWA8A3KMH1 1905 aa11.07□□□□□ -0.64
UBE2F-220ENST00000472479 TRIOBPQ9H2D6 2365 aa11.07□□□□□ -0.64
UBE2F-220ENST00000472479 LINC01565O15544 149 aa11.06□□□□□ -0.64
UBE2F-220ENST00000472479 SART1O43290 800 aaKnown RBP11.06□□□□□ -0.64
UBE2F-220ENST00000472479 ZSCAN12O43309 604 aa11.06□□□□□ -0.64
UBE2F-220ENST00000472479 ERBB2P04626 1255 aa11.06□□□□□ -0.64
UBE2F-220ENST00000472479 CCDC175P0C221 793 aa11.06□□□□□ -0.64
UBE2F-220ENST00000472479 RALAP11233 206 aa11.06□□□□□ -0.64
UBE2F-220ENST00000472479 ATF6P18850 670 aa11.06□□□□□ -0.64
UBE2F-220ENST00000472479 MMP8P22894 467 aa11.06□□□□□ -0.64
UBE2F-220ENST00000472479 VASPP50552 380 aaPredicted RBP11.06□□□□□ -0.64
UBE2F-220ENST00000472479 NUBP1P53384 320 aa11.06□□□□□ -0.64
UBE2F-220ENST00000472479 CCZ1BP86790 482 aa11.06□□□□□ -0.64
UBE2F-220ENST00000472479 CCZ1P86791 482 aaPredicted RBP11.06□□□□□ -0.64
UBE2F-220ENST00000472479 RBM10P98175 930 aaKnown RBP11.06□□□□□ -0.64
UBE2F-220ENST00000472479 KIF5AQ12840 1032 aa11.06□□□□□ -0.64
UBE2F-220ENST00000472479 ZNF268Q14587 947 aaPredicted RBP11.06□□□□□ -0.64
UBE2F-220ENST00000472479 ASTE1Q2TB18 679 aaPredicted RBP11.06□□□□□ -0.64
UBE2F-220ENST00000472479 PTPN20Q4JDL3 420 aa11.06□□□□□ -0.64
UBE2F-220ENST00000472479 PABPC1LQ4VXU2 614 aaKnown RBP11.06□□□□□ -0.64
UBE2F-220ENST00000472479 EFHC1Q5JVL4 640 aa11.06□□□□□ -0.64
UBE2F-220ENST00000472479 FAM102AQ5T9C2 384 aaPredicted RBP11.06□□□□□ -0.64
UBE2F-220ENST00000472479 GPR153Q6NV75 609 aa11.06□□□□□ -0.64
UBE2F-220ENST00000472479 PDZD4Q76G19 769 aaPredicted RBP11.06□□□□□ -0.64
UBE2F-220ENST00000472479 RSRC2Q7L4I2 434 aaKnown RBP11.06□□□□□ -0.64
UBE2F-220ENST00000472479 TMEM110Q86TL2 294 aa11.06□□□□□ -0.64
UBE2F-220ENST00000472479 ZDHHC17Q8IUH5 632 aa11.06□□□□□ -0.64
UBE2F-220ENST00000472479 ARHGAP18Q8N392 663 aa11.06□□□□□ -0.64
UBE2F-220ENST00000472479 RNF139Q8WU17 664 aa11.06□□□□□ -0.64
UBE2F-220ENST00000472479 NDRG1Q92597 394 aaKnown RBP11.06□□□□□ -0.64
UBE2F-220ENST00000472479 VCPIP1Q96JH7 1222 aa11.06□□□□□ -0.64
UBE2F-220ENST00000472479 CEP295NLQ96MC4 621 aa11.06□□□□□ -0.64
UBE2F-220ENST00000472479 SYT11Q9BT88 431 aa11.06□□□□□ -0.64
UBE2F-220ENST00000472479 ISCUQ9H1K1 167 aa11.06□□□□□ -0.64
UBE2F-220ENST00000472479 ATXN3LQ9H3M9 355 aa11.06□□□□□ -0.64
UBE2F-220ENST00000472479 SFXN1Q9H9B4 322 aa11.06□□□□□ -0.64
UBE2F-220ENST00000472479 MRPL47Q9HD33 250 aaKnown RBP11.06□□□□□ -0.64
UBE2F-220ENST00000472479 CNGB3Q9NQW8 809 aa11.06□□□□□ -0.64
UBE2F-220ENST00000472479 TLR8Q9NR97 1041 aaKnown RBP11.06□□□□□ -0.64
UBE2F-220ENST00000472479 PARVAQ9NVD7 372 aa11.06□□□□□ -0.64
UBE2F-220ENST00000472479 COMMD8Q9NX08 183 aa11.06□□□□□ -0.64
UBE2F-220ENST00000472479 TRPM5Q9NZQ8 1165 aa11.06□□□□□ -0.64
UBE2F-220ENST00000472479 CTTNBP2NLQ9P2B4 639 aa11.06□□□□□ -0.64
UBE2F-220ENST00000472479 TSC2P49815 1807 aa11.06□□□□□ -0.64
UBE2F-220ENST00000472479 GRAP2O75791 330 aa11.06□□□□□ -0.64
UBE2F-220ENST00000472479 KRT3P12035 628 aa11.06□□□□□ -0.64
UBE2F-220ENST00000472479 FECHP22830 423 aa11.06□□□□□ -0.64
UBE2F-220ENST00000472479 GABRR2P28476 465 aa11.06□□□□□ -0.64
UBE2F-220ENST00000472479 DEKP35659 375 aaKnown RBP11.06□□□□□ -0.64
UBE2F-220ENST00000472479 MRPS5P82675 430 aaKnown RBP11.06□□□□□ -0.64
UBE2F-220ENST00000472479 SLC6A3Q01959 620 aa11.06□□□□□ -0.64
UBE2F-220ENST00000472479 TAF10Q12962 218 aa11.06□□□□□ -0.64
UBE2F-220ENST00000472479 ATAT1Q5SQI0 421 aa11.06□□□□□ -0.64
UBE2F-220ENST00000472479 FAM183BPQ6ZVS7 135 aa11.06□□□□□ -0.64
UBE2F-220ENST00000472479 GPRIN1Q7Z2K8 1008 aa11.06□□□□□ -0.64
UBE2F-220ENST00000472479 GRASPQ7Z6J2 395 aaPredicted RBP11.06□□□□□ -0.64
UBE2F-220ENST00000472479 TMEM139Q8IV31 216 aa11.06□□□□□ -0.64
UBE2F-220ENST00000472479 PDZD8Q8NEN9 1154 aa11.06□□□□□ -0.64
UBE2F-220ENST00000472479 MRPS31Q92665 395 aaKnown RBP11.06□□□□□ -0.64
UBE2F-220ENST00000472479 PSMG2Q969U7 264 aa11.06□□□□□ -0.64
UBE2F-220ENST00000472479 PRKD2Q9BZL6 878 aa11.06□□□□□ -0.64
UBE2F-220ENST00000472479 THAP2Q9H0W7 228 aa11.06□□□□□ -0.64
UBE2F-220ENST00000472479 TMEM30AQ9NV96 361 aa11.06□□□□□ -0.64
UBE2F-220ENST00000472479 SCINQ9Y6U3 715 aa11.06□□□□□ -0.64
UBE2F-220ENST00000472479 HHLA1C9JL84 531 aa11.05□□□□□ -0.64
UBE2F-220ENST00000472479 ZNF197O14709 1029 aa11.05□□□□□ -0.64
UBE2F-220ENST00000472479 PAPSS1O43252 624 aaPredicted RBP11.05□□□□□ -0.64
UBE2F-220ENST00000472479 CCP110O43303 1012 aa11.05□□□□□ -0.64
UBE2F-220ENST00000472479 ATMINO43313 823 aaPredicted RBP11.05□□□□□ -0.64
UBE2F-220ENST00000472479 FGF19O95750 216 aa11.05□□□□□ -0.64
UBE2F-220ENST00000472479 HOXB8P17481 243 aaPredicted RBP11.05□□□□□ -0.64
UBE2F-220ENST00000472479 POU3F3P20264 500 aaPredicted RBP11.05□□□□□ -0.64
UBE2F-220ENST00000472479 RRM1P23921 792 aa11.05□□□□□ -0.64
UBE2F-220ENST00000472479 HOXA9P31269 272 aa11.05□□□□□ -0.64
UBE2F-220ENST00000472479 YWHAGP61981 247 aaKnown RBP eCLIP11.05□□□□□ -0.64
UBE2F-220ENST00000472479 USP46P62068 366 aa11.05□□□□□ -0.64
UBE2F-220ENST00000472479 ADAM15Q13444 863 aa11.05□□□□□ -0.64
UBE2F-220ENST00000472479 CLUL1Q15846 466 aa11.05□□□□□ -0.64
UBE2F-220ENST00000472479 ARHGAP29Q52LW3 1261 aa11.05□□□□□ -0.64
UBE2F-220ENST00000472479 ARHGAP15Q53QZ3 475 aa11.05□□□□□ -0.64
UBE2F-220ENST00000472479 ANKRD54Q6NXT1 300 aa11.05□□□□□ -0.64
UBE2F-220ENST00000472479 MON1BQ7L1V2 547 aa11.05□□□□□ -0.64
UBE2F-220ENST00000472479 TADA2BQ86TJ2 420 aa11.05□□□□□ -0.64
UBE2F-220ENST00000472479 MON1AQ86VX9 555 aa11.05□□□□□ -0.64
UBE2F-220ENST00000472479 XYLT1Q86Y38 959 aa11.05□□□□□ -0.64
UBE2F-220ENST00000472479 HS6ST3Q8IZP7 471 aa11.05□□□□□ -0.64
UBE2F-220ENST00000472479 TTC16Q8NEE8 873 aa11.05□□□□□ -0.64
UBE2F-220ENST00000472479 IRGQQ8WZA9 623 aa11.05□□□□□ -0.64
UBE2F-220ENST00000472479 DCBLD2Q96PD2 775 aa11.05□□□□□ -0.64
UBE2F-220ENST00000472479 TRIM62Q9BVG3 475 aa11.05□□□□□ -0.64
UBE2F-220ENST00000472479 PACSIN1Q9BY11 444 aa11.05□□□□□ -0.64
UBE2F-220ENST00000472479 SLITRK6Q9H5Y7 841 aa11.05□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 20.4 ms