RNA–Protein interactions for RNA: ENST00000472224.1

CLRN1-205, Transcript of clarin 1, humanhuman

TSL 3

Gene CLRN1, Length 606 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLRN1-205ENST00000472224 MAB21L3Q8N8X9 362 aa12.57□□□□□ -0.4
CLRN1-205ENST00000472224 KAT5Q92993 513 aa12.57□□□□□ -0.4
CLRN1-205ENST00000472224 FBXO32Q969P5 355 aa12.57□□□□□ -0.4
CLRN1-205ENST00000472224 ELSPBP1Q96BH3 223 aa12.57□□□□□ -0.4
CLRN1-205ENST00000472224 TRMT2BQ96GJ1 504 aaKnown RBP12.57□□□□□ -0.4
CLRN1-205ENST00000472224 C8orf48Q96LL4 319 aa12.57□□□□□ -0.4
CLRN1-205ENST00000472224 KCNK16Q96T55 309 aa12.57□□□□□ -0.4
CLRN1-205ENST00000472224 GPR88Q9GZN0 384 aa12.57□□□□□ -0.4
CLRN1-205ENST00000472224 TASP1Q9H6P5 420 aa12.57□□□□□ -0.4
CLRN1-205ENST00000472224 SMG5Q9UPR3 1016 aaKnown RBP12.57□□□□□ -0.4
CLRN1-205ENST00000472224 NFE2L3Q9Y4A8 694 aa12.57□□□□□ -0.4
CLRN1-205ENST00000472224 PCDHB4Q9Y5E5 795 aa12.57□□□□□ -0.4
CLRN1-205ENST00000472224 NCANO14594 1321 aa12.57□□□□□ -0.4
CLRN1-205ENST00000472224 FAM208BQ5VWN6 2430 aa12.57□□□□□ -0.4
CLRN1-205ENST00000472224 HEPACAM2A8MVW5 462 aa12.56□□□□□ -0.4
CLRN1-205ENST00000472224 KCNJ18B7U540 433 aa12.56□□□□□ -0.4
CLRN1-205ENST00000472224 PMM2O15305 246 aa12.56□□□□□ -0.4
CLRN1-205ENST00000472224 RAD23BP54727 409 aa12.56□□□□□ -0.4
CLRN1-205ENST00000472224 GPC5P78333 572 aa12.56□□□□□ -0.4
CLRN1-205ENST00000472224 TYRO3Q06418 890 aa12.56□□□□□ -0.4
CLRN1-205ENST00000472224 KCNJ12Q14500 433 aa12.56□□□□□ -0.4
CLRN1-205ENST00000472224 MAN2A1Q16706 1144 aa12.56□□□□□ -0.4
CLRN1-205ENST00000472224 PPP1R26Q5T8A7 1209 aaPredicted RBP12.56□□□□□ -0.4
CLRN1-205ENST00000472224 TMEM270Q6UE05 265 aa12.56□□□□□ -0.4
CLRN1-205ENST00000472224 VITQ6UXI7 678 aa12.56□□□□□ -0.4
CLRN1-205ENST00000472224 IRF2BP1Q8IU81 584 aa12.56□□□□□ -0.4
CLRN1-205ENST00000472224 ARID3BQ8IVW6 561 aaPredicted RBP12.56□□□□□ -0.4
CLRN1-205ENST00000472224 NUP93Q8N1F7 819 aa12.56□□□□□ -0.4
CLRN1-205ENST00000472224 SLC4A11Q8NBS3 891 aa12.56□□□□□ -0.4
CLRN1-205ENST00000472224 ZBTB44Q8NCP5 570 aa12.56□□□□□ -0.4
CLRN1-205ENST00000472224 CYFIP2Q96F07 1278 aa12.56□□□□□ -0.4
CLRN1-205ENST00000472224 TMEM176AQ96HP8 235 aa12.56□□□□□ -0.4
CLRN1-205ENST00000472224 FAXDC2Q96IV6 333 aa12.56□□□□□ -0.4
CLRN1-205ENST00000472224 SLITRK1Q96PX8 696 aa12.56□□□□□ -0.4
CLRN1-205ENST00000472224 SMOQ99835 787 aa12.56□□□□□ -0.4
CLRN1-205ENST00000472224 EPC1Q9H2F5 836 aa12.56□□□□□ -0.4
CLRN1-205ENST00000472224 SAMSN1Q9NSI8 373 aaKnown RBP12.56□□□□□ -0.4
CLRN1-205ENST00000472224 EHD2Q9NZN4 543 aa12.56□□□□□ -0.4
CLRN1-205ENST00000472224 TRPM5Q9NZQ8 1165 aa12.56□□□□□ -0.4
CLRN1-205ENST00000472224 FBXO4Q9UKT5 387 aa12.56□□□□□ -0.4
CLRN1-205ENST00000472224 USP18Q9UMW8 372 aa12.56□□□□□ -0.4
CLRN1-205ENST00000472224 F5P12259 2224 aa12.56□□□□□ -0.4
CLRN1-205ENST00000472224 TRAV19A0A0A6YYK7 116 aa12.55□□□□□ -0.4
CLRN1-205ENST00000472224 C2orf78A6NCI8 922 aa12.55□□□□□ -0.4
CLRN1-205ENST00000472224 LILRB5O75023 590 aa12.55□□□□□ -0.4
CLRN1-205ENST00000472224 BEST1O76090 585 aa12.55□□□□□ -0.4
CLRN1-205ENST00000472224 RTN3O95197 1032 aaPredicted RBP12.55□□□□□ -0.4
CLRN1-205ENST00000472224 CKMP06732 381 aa12.55□□□□□ -0.4
CLRN1-205ENST00000472224 KRT5P13647 590 aa12.55□□□□□ -0.4
CLRN1-205ENST00000472224 DDX6P26196 483 aaKnown RBP eCLIP12.55□□□□□ -0.4
CLRN1-205ENST00000472224 YWHAQP27348 245 aa12.55□□□□□ -0.4
CLRN1-205ENST00000472224 GDI1P31150 447 aa12.55□□□□□ -0.4
CLRN1-205ENST00000472224 STARD6P59095 220 aa12.55□□□□□ -0.4
CLRN1-205ENST00000472224 TAF10Q12962 218 aa12.55□□□□□ -0.4
CLRN1-205ENST00000472224 GOLGA7BQ2TAP0 167 aa12.55□□□□□ -0.4
CLRN1-205ENST00000472224 GBP6Q6ZN66 633 aa12.55□□□□□ -0.4
CLRN1-205ENST00000472224 EHBP1Q8NDI1 1231 aa12.55□□□□□ -0.4
CLRN1-205ENST00000472224 ZMIZ2Q8NF64 920 aa12.55□□□□□ -0.4
CLRN1-205ENST00000472224 SCAMP5Q8TAC9 235 aa12.55□□□□□ -0.4
CLRN1-205ENST00000472224 NELL1Q92832 810 aa12.55□□□□□ -0.4
CLRN1-205ENST00000472224 RSPRY1Q96DX4 576 aa12.55□□□□□ -0.4
CLRN1-205ENST00000472224 MYRFLQ96LU7 910 aa12.55□□□□□ -0.4
CLRN1-205ENST00000472224 CEP295NLQ96MC4 621 aa12.55□□□□□ -0.4
CLRN1-205ENST00000472224 HNRNPABQ99729 332 aaKnown RBP12.55□□□□□ -0.4
CLRN1-205ENST00000472224 TUBGCP2Q9BSJ2 902 aa12.55□□□□□ -0.4
CLRN1-205ENST00000472224 TRMT61BQ9BVS5 477 aaKnown RBP12.55□□□□□ -0.4
CLRN1-205ENST00000472224 SLC46A2Q9BY10 475 aa12.55□□□□□ -0.4
CLRN1-205ENST00000472224 BRD9Q9H8M2 597 aa12.55□□□□□ -0.4
CLRN1-205ENST00000472224 SLC2A4RGQ9NR83 387 aa12.55□□□□□ -0.4
CLRN1-205ENST00000472224 TAB2Q9NYJ8 693 aa12.55□□□□□ -0.4
CLRN1-205ENST00000472224 MTF2Q9Y483 593 aaPredicted RBP12.55□□□□□ -0.4
CLRN1-205ENST00000472224 PCDHGA2Q9Y5H1 932 aa12.55□□□□□ -0.4
CLRN1-205ENST00000472224 ZNF263O14978 683 aa12.54□□□□□ -0.4
CLRN1-205ENST00000472224 PSMC3P17980 439 aa12.54□□□□□ -0.4
CLRN1-205ENST00000472224 PFKPQ01813 784 aa12.54□□□□□ -0.4
CLRN1-205ENST00000472224 CSTF1Q05048 431 aaKnown RBP12.54□□□□□ -0.4
CLRN1-205ENST00000472224 EXOC3L4Q17RC7 722 aa12.54□□□□□ -0.4
CLRN1-205ENST00000472224 SGO2Q562F6 1265 aa12.54□□□□□ -0.4
CLRN1-205ENST00000472224 CT47A1Q5JQC4 288 aaPredicted RBP12.54□□□□□ -0.4
CLRN1-205ENST00000472224 GJB7Q6PEY0 223 aa12.54□□□□□ -0.4
CLRN1-205ENST00000472224 CLEC20AQ6ZU45 233 aa12.54□□□□□ -0.4
CLRN1-205ENST00000472224 GPRIN1Q7Z2K8 1008 aa12.54□□□□□ -0.4
CLRN1-205ENST00000472224 CMTM8Q8IZV2 173 aa12.54□□□□□ -0.4
CLRN1-205ENST00000472224 ARL14EPQ8N8R7 260 aaPredicted RBP12.54□□□□□ -0.4
CLRN1-205ENST00000472224 RBBP8NLQ8NC74 664 aaPredicted RBP12.54□□□□□ -0.4
CLRN1-205ENST00000472224 LMO3Q8TAP4 145 aa12.54□□□□□ -0.4
CLRN1-205ENST00000472224 ENOX1Q8TC92 643 aaKnown RBP12.54□□□□□ -0.4
CLRN1-205ENST00000472224 DEPDC1BQ8WUY9 529 aa12.54□□□□□ -0.4
CLRN1-205ENST00000472224 TTLL2Q9BWV7 592 aa12.54□□□□□ -0.4
CLRN1-205ENST00000472224 TRPV4Q9HBA0 871 aa12.54□□□□□ -0.4
CLRN1-205ENST00000472224 SPATA6Q9NWH7 488 aaPredicted RBP12.54□□□□□ -0.4
CLRN1-205ENST00000472224 GMIPQ9P107 970 aa12.54□□□□□ -0.4
CLRN1-205ENST00000472224 CCL26Q9Y258 94 aa12.54□□□□□ -0.4
CLRN1-205ENST00000472224 COL4A2P08572 1712 aa12.54□□□□□ -0.4
CLRN1-205ENST00000472224 SLC30A4O14863 429 aa12.53□□□□□ -0.4
CLRN1-205ENST00000472224 LAMTOR5O43504 91 aa12.53□□□□□ -0.4
CLRN1-205ENST00000472224 CALCAP01258 141 aa12.53□□□□□ -0.4
CLRN1-205ENST00000472224 TPM2P07951 284 aa12.53□□□□□ -0.4
CLRN1-205ENST00000472224 USP17L7P0C7H9 530 aa12.53□□□□□ -0.4
CLRN1-205ENST00000472224 SLC9A1P19634 815 aa12.53□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 27.2 ms