RNA–Protein interactions for RNA: ENST00000472223.5

CCM2-205, Transcript of CCM2 scaffold protein, humanhuman

TSL 3

Gene CCM2, Length 981 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCM2-205ENST00000472223 ISCUQ9H1K1 167 aa17.73■□□□□ 0.43
CCM2-205ENST00000472223 TLR8Q9NR97 1041 aaKnown RBP17.73■□□□□ 0.43
CCM2-205ENST00000472223 SPTLC3Q9NUV7 552 aa17.73■□□□□ 0.43
CCM2-205ENST00000472223 HHLA1C9JL84 531 aa17.72■□□□□ 0.43
CCM2-205ENST00000472223 PIK3R2O00459 728 aa17.72■□□□□ 0.43
CCM2-205ENST00000472223 TNFRSF10BO14763 440 aa17.72■□□□□ 0.43
CCM2-205ENST00000472223 LINC01565O15544 149 aa17.72■□□□□ 0.43
CCM2-205ENST00000472223 ABL1P00519 1130 aa17.72■□□□□ 0.43
CCM2-205ENST00000472223 H2AFZP0C0S5 128 aa17.72■□□□□ 0.43
CCM2-205ENST00000472223 USP17L7P0C7H9 530 aa17.72■□□□□ 0.43
CCM2-205ENST00000472223 DESP17661 470 aa17.72■□□□□ 0.43
CCM2-205ENST00000472223 CDC25CP30307 473 aa17.72■□□□□ 0.43
CCM2-205ENST00000472223 MAGEA1P43355 309 aa17.72■□□□□ 0.43
CCM2-205ENST00000472223 PSEN1P49768 467 aa17.72■□□□□ 0.43
CCM2-205ENST00000472223 KCNC3Q14003 757 aa17.72■□□□□ 0.43
CCM2-205ENST00000472223 ZNF268Q14587 947 aaPredicted RBP17.72■□□□□ 0.43
CCM2-205ENST00000472223 ASTE1Q2TB18 679 aaPredicted RBP17.72■□□□□ 0.43
CCM2-205ENST00000472223 ATAT1Q5SQI0 421 aa17.72■□□□□ 0.43
CCM2-205ENST00000472223 TMC5Q6UXY8 1006 aa17.72■□□□□ 0.43
CCM2-205ENST00000472223 H2AFVQ71UI9 128 aa17.72■□□□□ 0.43
CCM2-205ENST00000472223 MON1AQ86VX9 555 aa17.72■□□□□ 0.43
CCM2-205ENST00000472223 SCUBE3Q8IX30 993 aa17.72■□□□□ 0.43
CCM2-205ENST00000472223 SCAMP5Q8TAC9 235 aa17.72■□□□□ 0.43
CCM2-205ENST00000472223 OVCA2Q8WZ82 227 aa17.72■□□□□ 0.43
CCM2-205ENST00000472223 GUCD1Q96NT3 240 aa17.72■□□□□ 0.43
CCM2-205ENST00000472223 SELENOOQ9BVL4 669 aa17.72■□□□□ 0.43
CCM2-205ENST00000472223 ULBP1Q9BZM6 244 aa17.72■□□□□ 0.43
CCM2-205ENST00000472223 MRPL47Q9HD33 250 aaKnown RBP17.72■□□□□ 0.43
CCM2-205ENST00000472223 TMEM30AQ9NV96 361 aa17.72■□□□□ 0.43
CCM2-205ENST00000472223 TRPM5Q9NZQ8 1165 aa17.72■□□□□ 0.43
CCM2-205ENST00000472223 CYTH4Q9UIA0 394 aa17.72■□□□□ 0.43
CCM2-205ENST00000472223 SCML2Q9UQR0 700 aa17.72■□□□□ 0.43
CCM2-205ENST00000472223 CAPN9O14815 690 aa17.71■□□□□ 0.43
CCM2-205ENST00000472223 RALAP11233 206 aa17.71■□□□□ 0.43
CCM2-205ENST00000472223 MYL4P12829 197 aa17.71■□□□□ 0.43
CCM2-205ENST00000472223 GABRB2P47870 512 aa17.71■□□□□ 0.43
CCM2-205ENST00000472223 RPL34P49207 117 aaKnown RBP17.71■□□□□ 0.43
CCM2-205ENST00000472223 GPC5P78333 572 aa17.71■□□□□ 0.43
CCM2-205ENST00000472223 MRPS5P82675 430 aaKnown RBP17.71■□□□□ 0.43
CCM2-205ENST00000472223 RBM10P98175 930 aaKnown RBP17.71■□□□□ 0.43
CCM2-205ENST00000472223 TAF10Q12962 218 aa17.71■□□□□ 0.43
CCM2-205ENST00000472223 PTPN20Q4JDL3 420 aa17.71■□□□□ 0.43
CCM2-205ENST00000472223 KIAA1328Q86T90 577 aa17.71■□□□□ 0.43
CCM2-205ENST00000472223 TADA2BQ86TJ2 420 aa17.71■□□□□ 0.43
CCM2-205ENST00000472223 MCOLN2Q8IZK6 566 aa17.71■□□□□ 0.43
CCM2-205ENST00000472223 SCML4Q8N228 414 aa17.71■□□□□ 0.43
CCM2-205ENST00000472223 C12orf76Q8N812 135 aaPredicted RBP17.71■□□□□ 0.43
CCM2-205ENST00000472223 VN1R2Q8NFZ6 395 aa17.71■□□□□ 0.43
CCM2-205ENST00000472223 FAM149B1Q96BN6 582 aa17.71■□□□□ 0.43
CCM2-205ENST00000472223 ZNF653Q96CK0 615 aa17.71■□□□□ 0.43
CCM2-205ENST00000472223 MYRFLQ96LU7 910 aa17.71■□□□□ 0.43
CCM2-205ENST00000472223 RIPOR3Q96MK2 946 aa17.71■□□□□ 0.43
CCM2-205ENST00000472223 TTLL2Q9BWV7 592 aa17.71■□□□□ 0.43
CCM2-205ENST00000472223 PARVAQ9NVD7 372 aa17.71■□□□□ 0.43
CCM2-205ENST00000472223 USP3Q9Y6I4 520 aa17.71■□□□□ 0.43
CCM2-205ENST00000472223 SCINQ9Y6U3 715 aa17.71■□□□□ 0.43
CCM2-205ENST00000472223 PATJQ8NI35 1801 aa17.7■□□□□ 0.42
CCM2-205ENST00000472223 FAM170AA1A519 330 aa17.7■□□□□ 0.42
CCM2-205ENST00000472223 GLP2RO95838 553 aa17.7■□□□□ 0.42
CCM2-205ENST00000472223 ERBB2P04626 1255 aa17.7■□□□□ 0.42
CCM2-205ENST00000472223 ABCB4P21439 1286 aa17.7■□□□□ 0.42
CCM2-205ENST00000472223 SLC6A3Q01959 620 aa17.7■□□□□ 0.42
CCM2-205ENST00000472223 MTMR3Q13615 1198 aa17.7■□□□□ 0.42
CCM2-205ENST00000472223 CTC1Q2NKJ3 1217 aa17.7■□□□□ 0.42
CCM2-205ENST00000472223 ARHGAP15Q53QZ3 475 aa17.7■□□□□ 0.42
CCM2-205ENST00000472223 BTBD8Q5XKL5 378 aa17.7■□□□□ 0.42
CCM2-205ENST00000472223 PM20D1Q6GTS8 502 aa17.7■□□□□ 0.42
CCM2-205ENST00000472223 DNAJC24Q6P3W2 148 aa17.7■□□□□ 0.42
CCM2-205ENST00000472223 GPRIN1Q7Z2K8 1008 aa17.7■□□□□ 0.42
CCM2-205ENST00000472223 GPR149Q86SP6 731 aa17.7■□□□□ 0.42
CCM2-205ENST00000472223 TMEM139Q8IV31 216 aa17.7■□□□□ 0.42
CCM2-205ENST00000472223 MRPS31Q92665 395 aaKnown RBP17.7■□□□□ 0.42
CCM2-205ENST00000472223 CDK5RAP1Q96SZ6 601 aaKnown RBP17.7■□□□□ 0.42
CCM2-205ENST00000472223 ADAM7Q9H2U9 754 aa17.7■□□□□ 0.42
CCM2-205ENST00000472223 TAS2R14Q9NYV8 317 aa17.7■□□□□ 0.42
CCM2-205ENST00000472223 IL37Q9NZH6 218 aa17.7■□□□□ 0.42
CCM2-205ENST00000472223 CNOT8Q9UFF9 292 aaKnown RBP17.7■□□□□ 0.42
CCM2-205ENST00000472223 INTUQ9ULD6 942 aa17.7■□□□□ 0.42
CCM2-205ENST00000472223 PCDHA13Q9Y5I0 950 aa17.7■□□□□ 0.42
CCM2-205ENST00000472223 GOLGA8SH3BPF8 625 aa17.69■□□□□ 0.42
CCM2-205ENST00000472223 LCA5LO95447 670 aa17.69■□□□□ 0.42
CCM2-205ENST00000472223 GLI1P08151 1106 aa17.69■□□□□ 0.42
CCM2-205ENST00000472223 HMGA1P17096 107 aaKnown RBP17.69■□□□□ 0.42
CCM2-205ENST00000472223 GABRR2P28476 465 aa17.69■□□□□ 0.42
CCM2-205ENST00000472223 SCNN1AP37088 669 aa17.69■□□□□ 0.42
CCM2-205ENST00000472223 MTHFRP42898 656 aa17.69■□□□□ 0.42
CCM2-205ENST00000472223 GALCP54803 685 aa17.69■□□□□ 0.42
CCM2-205ENST00000472223 DAOAP59103 153 aa17.69■□□□□ 0.42
CCM2-205ENST00000472223 YWHAGP61981 247 aaKnown RBP eCLIP17.69■□□□□ 0.42
CCM2-205ENST00000472223 FAM102AQ5T9C2 384 aaPredicted RBP17.69■□□□□ 0.42
CCM2-205ENST00000472223 DCUN1D2Q6PH85 259 aa17.69■□□□□ 0.42
CCM2-205ENST00000472223 RAD9BQ6WBX8 426 aa17.69■□□□□ 0.42
CCM2-205ENST00000472223 FAM183BPQ6ZVS7 135 aa17.69■□□□□ 0.42
CCM2-205ENST00000472223 MON1BQ7L1V2 547 aa17.69■□□□□ 0.42
CCM2-205ENST00000472223 RSRC2Q7L4I2 434 aaKnown RBP17.69■□□□□ 0.42
CCM2-205ENST00000472223 GRASPQ7Z6J2 395 aaPredicted RBP17.69■□□□□ 0.42
CCM2-205ENST00000472223 RNF139Q8WU17 664 aa17.69■□□□□ 0.42
CCM2-205ENST00000472223 APOL5Q9BWW9 433 aa17.69■□□□□ 0.42
CCM2-205ENST00000472223 NACA2Q9H009 215 aa17.69■□□□□ 0.42
CCM2-205ENST00000472223 ATXN3LQ9H3M9 355 aa17.69■□□□□ 0.42
Retrieved 100 of 20,778 RNA–protein pairs in 28.1 ms