RNA–Protein interactions for RNA: ENST00000472045.1

IRF1-208, Transcript of interferon regulatory factor 1, humanhuman

TSL 2

Gene IRF1, Length 5,153 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IRF1-208ENST00000472045 TTLL9Q3SXZ7 439 aa12.72□□□□□ -0.37
IRF1-208ENST00000472045 RBM23Q86U06 439 aaKnown RBP12.72□□□□□ -0.37
IRF1-208ENST00000472045 ZSWIM1Q9BR11 485 aa12.72□□□□□ -0.37
IRF1-208ENST00000472045 ATP13A1Q9HD20 1204 aa12.72□□□□□ -0.37
IRF1-208ENST00000472045 RHOBTB1O94844 696 aa12.72□□□□□ -0.37
IRF1-208ENST00000472045 MAP3K6O95382 1288 aa12.72□□□□□ -0.37
IRF1-208ENST00000472045 BRAFP15056 766 aa12.72□□□□□ -0.37
IRF1-208ENST00000472045 C1QBPQ07021 282 aaKnown RBP12.72□□□□□ -0.37
IRF1-208ENST00000472045 MAPK8IP2Q13387 824 aaPredicted RBP12.72□□□□□ -0.37
IRF1-208ENST00000472045 AARS2Q5JTZ9 985 aaKnown RBP12.72□□□□□ -0.37
IRF1-208ENST00000472045 UNC93AQ86WB7 457 aa12.72□□□□□ -0.37
IRF1-208ENST00000472045 LGI2Q8N0V4 545 aa12.72□□□□□ -0.37
IRF1-208ENST00000472045 ZNF557Q8N988 423 aaPredicted RBP12.72□□□□□ -0.37
IRF1-208ENST00000472045 C12orf42Q96LP6 360 aa12.72□□□□□ -0.37
IRF1-208ENST00000472045 COG4Q9H9E3 785 aa12.72□□□□□ -0.37
IRF1-208ENST00000472045 SPG21Q9NZD8 308 aa12.72□□□□□ -0.37
IRF1-208ENST00000472045 CD274Q9NZQ7 290 aa12.72□□□□□ -0.37
IRF1-208ENST00000472045 PPARGC1AQ9UBK2 798 aaKnown RBP12.72□□□□□ -0.37
IRF1-208ENST00000472045 NCKAP1Q9Y2A7 1128 aa12.72□□□□□ -0.37
IRF1-208ENST00000472045 TISP43B9A030 160 aa12.72□□□□□ -0.37
IRF1-208ENST00000472045 PLEKP08567 350 aaPredicted RBP12.72□□□□□ -0.37
IRF1-208ENST00000472045 SPRP35270 261 aaPredicted RBP12.72□□□□□ -0.37
IRF1-208ENST00000472045 LIG3P49916 1009 aa12.72□□□□□ -0.37
IRF1-208ENST00000472045 SERPINB9P50453 376 aa12.72□□□□□ -0.37
IRF1-208ENST00000472045 GTF2BQ00403 316 aa12.72□□□□□ -0.37
IRF1-208ENST00000472045 MKRN4PQ13434 485 aaPredicted RBP12.72□□□□□ -0.37
IRF1-208ENST00000472045 UGCGQ16739 394 aa12.72□□□□□ -0.37
IRF1-208ENST00000472045 SNX31Q8N9S9 440 aa12.72□□□□□ -0.37
IRF1-208ENST00000472045 TMEM161BQ8NDZ6 487 aa12.72□□□□□ -0.37
IRF1-208ENST00000472045 TPCN2Q8NHX9 752 aa12.72□□□□□ -0.37
IRF1-208ENST00000472045 FRMD8P1Q9BZ68 369 aaPredicted RBP12.72□□□□□ -0.37
IRF1-208ENST00000472045 TRIM33Q9UPN9 1127 aa12.72□□□□□ -0.37
IRF1-208ENST00000472045 DDHD2O94830 711 aa12.72□□□□□ -0.37
IRF1-208ENST00000472045 KITP10721 976 aa12.72□□□□□ -0.37
IRF1-208ENST00000472045 RENBPP51606 427 aa12.72□□□□□ -0.37
IRF1-208ENST00000472045 CLCN6P51797 869 aa12.72□□□□□ -0.37
IRF1-208ENST00000472045 FSTL1Q12841 308 aa12.72□□□□□ -0.37
IRF1-208ENST00000472045 MTFR1Q15390 333 aa12.72□□□□□ -0.37
IRF1-208ENST00000472045 FNDC3BQ53EP0 1204 aaKnown RBP12.72□□□□□ -0.37
IRF1-208ENST00000472045 DENND5BQ6ZUT9 1274 aa12.72□□□□□ -0.37
IRF1-208ENST00000472045 PDZD8Q8NEN9 1154 aa12.72□□□□□ -0.37
IRF1-208ENST00000472045 ETNPPLQ8TBG4 499 aa12.72□□□□□ -0.37
IRF1-208ENST00000472045 SKA1Q96BD8 255 aa12.72□□□□□ -0.37
IRF1-208ENST00000472045 IL17RAQ96F46 866 aa12.72□□□□□ -0.37
IRF1-208ENST00000472045 WDR24Q96S15 920 aa12.72□□□□□ -0.37
IRF1-208ENST00000472045 IRX2Q9BZI1 471 aaPredicted RBP12.72□□□□□ -0.37
IRF1-208ENST00000472045 XAB2Q9HCS7 855 aaKnown RBP12.72□□□□□ -0.37
IRF1-208ENST00000472045 FBXL5Q9UKA1 691 aa12.72□□□□□ -0.37
IRF1-208ENST00000472045 CDH9Q9ULB4 789 aa12.72□□□□□ -0.37
IRF1-208ENST00000472045 CSH1P0DML2 217 aa12.71□□□□□ -0.37
IRF1-208ENST00000472045 CSH2P0DML3 217 aa12.71□□□□□ -0.37
IRF1-208ENST00000472045 SMPD1P17405 629 aa12.71□□□□□ -0.37
IRF1-208ENST00000472045 OR1E1P30953 314 aa12.71□□□□□ -0.37
IRF1-208ENST00000472045 ATP5C1P36542 298 aaKnown RBP12.71□□□□□ -0.37
IRF1-208ENST00000472045 ZNF268Q14587 947 aaPredicted RBP12.71□□□□□ -0.37
IRF1-208ENST00000472045 PLPP4Q5VZY2 271 aa12.71□□□□□ -0.37
IRF1-208ENST00000472045 ERAP2Q6P179 960 aa12.71□□□□□ -0.37
IRF1-208ENST00000472045 ABHD15Q6UXT9 468 aa12.71□□□□□ -0.37
IRF1-208ENST00000472045 TFAP2DQ7Z6R9 452 aa12.71□□□□□ -0.37
IRF1-208ENST00000472045 ARHGEF19Q8IW93 802 aa12.71□□□□□ -0.37
IRF1-208ENST00000472045 ELMO3Q96BJ8 720 aa12.71□□□□□ -0.37
IRF1-208ENST00000472045 SERPINI1Q99574 410 aa12.71□□□□□ -0.37
IRF1-208ENST00000472045 ADGRE3Q9BY15 652 aa12.71□□□□□ -0.37
IRF1-208ENST00000472045 NT5MQ9NPB1 228 aa12.71□□□□□ -0.37
IRF1-208ENST00000472045 ZMYND8Q9ULU4 1186 aaPredicted RBP12.71□□□□□ -0.37
IRF1-208ENST00000472045 RPTORQ8N122 1335 aa12.71□□□□□ -0.37
IRF1-208ENST00000472045 USP17L7P0C7H9 530 aa12.71□□□□□ -0.37
IRF1-208ENST00000472045 CSE1LP55060 971 aaKnown RBP12.71□□□□□ -0.37
IRF1-208ENST00000472045 FOXD4Q12950 439 aaPredicted RBP12.71□□□□□ -0.37
IRF1-208ENST00000472045 SGCGQ13326 291 aa12.71□□□□□ -0.37
IRF1-208ENST00000472045 LENG1Q96BZ8 264 aaPredicted RBP12.71□□□□□ -0.37
IRF1-208ENST00000472045 TLE6Q9H808 572 aa12.71□□□□□ -0.37
IRF1-208ENST00000472045 MARCH2Q9P0N8 246 aa12.71□□□□□ -0.37
IRF1-208ENST00000472045 SPAG6O75602 509 aa12.71□□□□□ -0.38
IRF1-208ENST00000472045 GLUD1P00367 558 aa12.71□□□□□ -0.38
IRF1-208ENST00000472045 ESRRAP11474 423 aaPredicted RBP12.71□□□□□ -0.38
IRF1-208ENST00000472045 SCNN1BP51168 640 aa12.71□□□□□ -0.38
IRF1-208ENST00000472045 TFDP3Q5H9I0 405 aa12.71□□□□□ -0.38
IRF1-208ENST00000472045 FIGNQ5HY92 759 aa12.71□□□□□ -0.38
IRF1-208ENST00000472045 MRNIPQ6NTE8 343 aa12.71□□□□□ -0.38
IRF1-208ENST00000472045 FAM47EQ6ZV65 393 aa12.71□□□□□ -0.38
IRF1-208ENST00000472045 CCDC33Q8N5R6 958 aa12.71□□□□□ -0.38
IRF1-208ENST00000472045 NFKBIZQ9BYH8 718 aa12.71□□□□□ -0.38
IRF1-208ENST00000472045 FOXP3Q9BZS1 431 aa12.71□□□□□ -0.38
IRF1-208ENST00000472045 KDM4CQ9H3R0 1056 aa12.71□□□□□ -0.38
IRF1-208ENST00000472045 SRRDQ9UH36 339 aa12.71□□□□□ -0.38
IRF1-208ENST00000472045 L3MBTL1Q9Y468 752 aa12.71□□□□□ -0.38
IRF1-208ENST00000472045 TBC1D3BA6NDS4 549 aa12.71□□□□□ -0.38
IRF1-208ENST00000472045 B4GALT5O43286 388 aa12.71□□□□□ -0.38
IRF1-208ENST00000472045 LTFP02788 710 aa12.71□□□□□ -0.38
IRF1-208ENST00000472045 DARSP14868 501 aaKnown RBP12.71□□□□□ -0.38
IRF1-208ENST00000472045 ITGALP20701 1170 aa12.71□□□□□ -0.38
IRF1-208ENST00000472045 GRM5P41594 1212 aa12.71□□□□□ -0.38
IRF1-208ENST00000472045 TUBP50607 506 aa12.71□□□□□ -0.38
IRF1-208ENST00000472045 MORF4L2Q15014 288 aa12.71□□□□□ -0.38
IRF1-208ENST00000472045 HECTD3Q5T447 861 aa12.71□□□□□ -0.38
IRF1-208ENST00000472045 SLC24A5Q71RS6 500 aa12.71□□□□□ -0.38
IRF1-208ENST00000472045 ANO5Q75V66 913 aa12.71□□□□□ -0.38
IRF1-208ENST00000472045 AMIGO3Q86WK7 504 aa12.71□□□□□ -0.38
IRF1-208ENST00000472045 PPIL6Q8IXY8 311 aa12.71□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 22.1 ms