RNA–Protein interactions for RNA: ENST00000471701.1

PRPF40A-207, Transcript of pre-mRNA processing factor 40 homolog A, humanhuman

TSL 2

Gene PRPF40A, Length 293 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF40A-207ENST00000471701 PSG6Q00889 435 aa4.23□□□□□ -1.73
PRPF40A-207ENST00000471701 ZNF91Q05481 1191 aa4.23□□□□□ -1.73
PRPF40A-207ENST00000471701 LMAN2Q12907 356 aa4.23□□□□□ -1.73
PRPF40A-207ENST00000471701 ANO6Q4KMQ2 910 aa4.23□□□□□ -1.73
PRPF40A-207ENST00000471701 ANO7Q6IWH7 933 aa4.23□□□□□ -1.73
PRPF40A-207ENST00000471701 SAMD14Q8IZD0 417 aaPredicted RBP4.23□□□□□ -1.73
PRPF40A-207ENST00000471701 NRACQ8N912 160 aa4.23□□□□□ -1.73
PRPF40A-207ENST00000471701 DNAJB14Q8TBM8 379 aa4.23□□□□□ -1.73
PRPF40A-207ENST00000471701 JPH3Q8WXH2 748 aaPredicted RBP4.23□□□□□ -1.73
PRPF40A-207ENST00000471701 HS6ST2Q96MM7 605 aa4.23□□□□□ -1.73
PRPF40A-207ENST00000471701 AIFM3Q96NN9 605 aa4.23□□□□□ -1.73
PRPF40A-207ENST00000471701 NT5C1BQ96P26 610 aa4.23□□□□□ -1.73
PRPF40A-207ENST00000471701 ACO2Q99798 780 aaKnown RBP4.23□□□□□ -1.73
PRPF40A-207ENST00000471701 ZNF518BQ9C0D4 1074 aa4.23□□□□□ -1.73
PRPF40A-207ENST00000471701 POT1Q9NUX5 634 aa4.23□□□□□ -1.73
PRPF40A-207ENST00000471701 ASIC5Q9NY37 505 aa4.23□□□□□ -1.73
PRPF40A-207ENST00000471701 MTMR4Q9NYA4 1195 aa4.23□□□□□ -1.73
PRPF40A-207ENST00000471701 GABBR1Q9UBS5 961 aa4.23□□□□□ -1.73
PRPF40A-207ENST00000471701 TMEM233B4DJY2 109 aa4.22□□□□□ -1.73
PRPF40A-207ENST00000471701 RASSF9O75901 435 aa4.22□□□□□ -1.73
PRPF40A-207ENST00000471701 SLC7A1P30825 629 aa4.22□□□□□ -1.73
PRPF40A-207ENST00000471701 ANAPC15P60006 121 aa4.22□□□□□ -1.73
PRPF40A-207ENST00000471701 RAPGEF1Q13905 1077 aa4.22□□□□□ -1.73
PRPF40A-207ENST00000471701 GPR162Q16538 588 aa4.22□□□□□ -1.73
PRPF40A-207ENST00000471701 C10orf25Q5T742 122 aa4.22□□□□□ -1.73
PRPF40A-207ENST00000471701 CACHD1Q5VU97 1274 aa4.22□□□□□ -1.73
PRPF40A-207ENST00000471701 VSTM1Q6UX27 236 aa4.22□□□□□ -1.73
PRPF40A-207ENST00000471701 RANBP10Q6VN20 620 aa4.22□□□□□ -1.73
PRPF40A-207ENST00000471701 LIX1LQ8IVB5 337 aa4.22□□□□□ -1.73
PRPF40A-207ENST00000471701 PPP1R35Q8TAP8 253 aa4.22□□□□□ -1.73
PRPF40A-207ENST00000471701 ZNF398Q8TD17 642 aa4.22□□□□□ -1.73
PRPF40A-207ENST00000471701 SPSB4Q96A44 273 aa4.22□□□□□ -1.73
PRPF40A-207ENST00000471701 SIGLEC11Q96RL6 698 aa4.22□□□□□ -1.73
PRPF40A-207ENST00000471701 BRIP1Q9BX63 1249 aa4.22□□□□□ -1.73
PRPF40A-207ENST00000471701 DPH1Q9BZG8 443 aa4.22□□□□□ -1.73
PRPF40A-207ENST00000471701 TRIM5Q9C035 493 aa4.22□□□□□ -1.73
PRPF40A-207ENST00000471701 FOXP1Q9H334 677 aaPredicted RBP4.22□□□□□ -1.73
PRPF40A-207ENST00000471701 ZMAT3Q9HA38 289 aaKnown RBP4.22□□□□□ -1.73
PRPF40A-207ENST00000471701 LPAR3Q9UBY5 353 aa4.22□□□□□ -1.73
PRPF40A-207ENST00000471701 NKX1-2Q9UD57 310 aaPredicted RBP4.22□□□□□ -1.73
PRPF40A-207ENST00000471701 ADAM10O14672 748 aa4.21□□□□□ -1.74
PRPF40A-207ENST00000471701 TMPRSS11DO60235 418 aa4.21□□□□□ -1.74
PRPF40A-207ENST00000471701 CTNND1O60716 968 aaKnown RBP4.21□□□□□ -1.74
PRPF40A-207ENST00000471701 SRGAP2O75044 1071 aa4.21□□□□□ -1.74
PRPF40A-207ENST00000471701 PRF1P14222 555 aa4.21□□□□□ -1.74
PRPF40A-207ENST00000471701 CD19P15391 556 aa4.21□□□□□ -1.74
PRPF40A-207ENST00000471701 EN2P19622 333 aaPredicted RBP4.21□□□□□ -1.74
PRPF40A-207ENST00000471701 HOXD9P28356 352 aaPredicted RBP4.21□□□□□ -1.74
PRPF40A-207ENST00000471701 UQCRC1P31930 480 aa4.21□□□□□ -1.74
PRPF40A-207ENST00000471701 CCKBRP32239 447 aa4.21□□□□□ -1.74
PRPF40A-207ENST00000471701 DIO1P49895 249 aa4.21□□□□□ -1.74
PRPF40A-207ENST00000471701 ID2Q02363 134 aa4.21□□□□□ -1.74
PRPF40A-207ENST00000471701 DCAF12L1Q5VU92 463 aa4.21□□□□□ -1.74
PRPF40A-207ENST00000471701 RUSC1-AS1Q66K80 236 aa4.21□□□□□ -1.74
PRPF40A-207ENST00000471701 PIM3Q86V86 326 aa4.21□□□□□ -1.74
PRPF40A-207ENST00000471701 MAP4K1Q92918 833 aa4.21□□□□□ -1.74
PRPF40A-207ENST00000471701 ZC3H10Q96K80 434 aaKnown RBP4.21□□□□□ -1.74
PRPF40A-207ENST00000471701 VN1R3Q9BXE9 311 aa4.21□□□□□ -1.74
PRPF40A-207ENST00000471701 RHOBTB2Q9BYZ6 727 aa4.21□□□□□ -1.74
PRPF40A-207ENST00000471701 SMURF2Q9HAU4 748 aa4.21□□□□□ -1.74
PRPF40A-207ENST00000471701 SACM1LQ9NTJ5 587 aa4.21□□□□□ -1.74
PRPF40A-207ENST00000471701 CDY1Q9Y6F8 540 aa4.21□□□□□ -1.74
PRPF40A-207ENST00000471701 LOC102723971A0A1B0GUV8 181 aa4.2□□□□□ -1.74
PRPF40A-207ENST00000471701 ZKSCAN1P17029 563 aaPredicted RBP4.2□□□□□ -1.74
PRPF40A-207ENST00000471701 CCKARP32238 428 aa4.2□□□□□ -1.74
PRPF40A-207ENST00000471701 ME1P48163 572 aa4.2□□□□□ -1.74
PRPF40A-207ENST00000471701 GATMP50440 423 aa4.2□□□□□ -1.74
PRPF40A-207ENST00000471701 AGFG1P52594 562 aaKnown RBP4.2□□□□□ -1.74
PRPF40A-207ENST00000471701 TIRAPP58753 221 aa4.2□□□□□ -1.74
PRPF40A-207ENST00000471701 PIN1Q13526 163 aaPredicted RBP4.2□□□□□ -1.74
PRPF40A-207ENST00000471701 LARS2Q15031 903 aaKnown RBP4.2□□□□□ -1.74
PRPF40A-207ENST00000471701 TTF1Q15361 905 aaPredicted RBP4.2□□□□□ -1.74
PRPF40A-207ENST00000471701 KLHL22Q53GT1 634 aa4.2□□□□□ -1.74
PRPF40A-207ENST00000471701 CC2D1BQ5T0F9 858 aaKnown RBP4.2□□□□□ -1.74
PRPF40A-207ENST00000471701 ZDHHC24Q6UX98 284 aa4.2□□□□□ -1.74
PRPF40A-207ENST00000471701 NPNTQ6UXI9 565 aa4.2□□□□□ -1.74
PRPF40A-207ENST00000471701 DCDC5Q6ZRR9 648 aa4.2□□□□□ -1.74
PRPF40A-207ENST00000471701 MAEAQ7L5Y9 396 aa4.2□□□□□ -1.74
PRPF40A-207ENST00000471701 TPH2Q8IWU9 490 aa4.2□□□□□ -1.74
PRPF40A-207ENST00000471701 IL31RAQ8NI17 732 aa4.2□□□□□ -1.74
PRPF40A-207ENST00000471701 SMCR8Q8TEV9 937 aaPredicted RBP4.2□□□□□ -1.74
PRPF40A-207ENST00000471701 PNISRQ8TF01 805 aaKnown RBP4.2□□□□□ -1.74
PRPF40A-207ENST00000471701 CTHRC1Q96CG8 243 aa4.2□□□□□ -1.74
PRPF40A-207ENST00000471701 ZBTB45Q96K62 511 aaPredicted RBP4.2□□□□□ -1.74
PRPF40A-207ENST00000471701 DDX56Q9NY93 547 aaKnown RBP4.2□□□□□ -1.74
PRPF40A-207ENST00000471701 TTC3P53804 2025 aa4.2□□□□□ -1.74
PRPF40A-207ENST00000471701 ZMYM2Q9UBW7 1377 aa4.19□□□□□ -1.74
PRPF40A-207ENST00000471701 IGKV2D-30A0A075B6S6 120 aa4.19□□□□□ -1.74
PRPF40A-207ENST00000471701 FAM90A10PA6NDY2 464 aa4.19□□□□□ -1.74
PRPF40A-207ENST00000471701 CAPN8A6NHC0 703 aa4.19□□□□□ -1.74
PRPF40A-207ENST00000471701 CD8B2A6NJW9 211 aa4.19□□□□□ -1.74
PRPF40A-207ENST00000471701 H3BNX3 289 aa4.19□□□□□ -1.74
PRPF40A-207ENST00000471701 PYCARD-AS1I3L0S3 204 aa4.19□□□□□ -1.74
PRPF40A-207ENST00000471701 CLIC1O00299 241 aa4.19□□□□□ -1.74
PRPF40A-207ENST00000471701 EXOC5O00471 708 aa4.19□□□□□ -1.74
PRPF40A-207ENST00000471701 CCP110O43303 1012 aa4.19□□□□□ -1.74
PRPF40A-207ENST00000471701 TUSC2O75896 110 aa4.19□□□□□ -1.74
PRPF40A-207ENST00000471701 APEHP13798 732 aaKnown RBP4.19□□□□□ -1.74
PRPF40A-207ENST00000471701 RAB27AP51159 221 aa4.19□□□□□ -1.74
PRPF40A-207ENST00000471701 SUMO3P55854 103 aaPredicted RBP4.19□□□□□ -1.74
Retrieved 100 of 20,778 RNA–protein pairs in 21.4 ms