RNA–Protein interactions for RNA: ENST00000471658.5

PSPC1-203, Transcript of paraspeckle component 1, humanhuman

TSL 1 (best)

Gene PSPC1, Length 1,647 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PSPC1-203ENST00000471658 PLEKHA7Q6IQ23 1121 aa20.18■□□□□ 0.82
PSPC1-203ENST00000471658 OLFML1Q6UWY5 402 aa20.18■□□□□ 0.82
PSPC1-203ENST00000471658 DENND5BQ6ZUT9 1274 aa20.18■□□□□ 0.82
PSPC1-203ENST00000471658 HFE2Q6ZVN8 426 aa20.18■□□□□ 0.82
PSPC1-203ENST00000471658 BHLHA9Q7RTU4 235 aa20.18■□□□□ 0.82
PSPC1-203ENST00000471658 VN1R2Q8NFZ6 395 aa20.18■□□□□ 0.82
PSPC1-203ENST00000471658 SLC35G2Q8TBE7 412 aa20.18■□□□□ 0.82
PSPC1-203ENST00000471658 TRIM11Q96F44 468 aa20.18■□□□□ 0.82
PSPC1-203ENST00000471658 TRIM7Q9C029 511 aa20.18■□□□□ 0.82
PSPC1-203ENST00000471658 STRIP2Q9ULQ0 834 aa20.18■□□□□ 0.82
PSPC1-203ENST00000471658 MAGED2Q9UNF1 606 aaPredicted RBP20.18■□□□□ 0.82
PSPC1-203ENST00000471658 ZSCAN12O43309 604 aa20.17■□□□□ 0.82
PSPC1-203ENST00000471658 RFPL2O75678 378 aa20.17■□□□□ 0.82
PSPC1-203ENST00000471658 ZBED1O96006 694 aa20.17■□□□□ 0.82
PSPC1-203ENST00000471658 DAOAP59103 153 aa20.17■□□□□ 0.82
PSPC1-203ENST00000471658 MRPS5P82675 430 aaKnown RBP20.17■□□□□ 0.82
PSPC1-203ENST00000471658 SLC6A3Q01959 620 aa20.17■□□□□ 0.82
PSPC1-203ENST00000471658 KIF5AQ12840 1032 aa20.17■□□□□ 0.82
PSPC1-203ENST00000471658 FAM102AQ5T9C2 384 aaPredicted RBP20.17■□□□□ 0.82
PSPC1-203ENST00000471658 PM20D1Q6GTS8 502 aa20.17■□□□□ 0.82
PSPC1-203ENST00000471658 CCDC149Q6ZUS6 474 aa20.17■□□□□ 0.82
PSPC1-203ENST00000471658 JOSD2Q8TAC2 188 aa20.17■□□□□ 0.82
PSPC1-203ENST00000471658 NUP85Q9BW27 656 aa20.17■□□□□ 0.82
PSPC1-203ENST00000471658 AVENQ9NQS1 362 aaPredicted RBP20.17■□□□□ 0.82
PSPC1-203ENST00000471658 METTL5Q9NRN9 209 aaKnown RBP20.17■□□□□ 0.82
PSPC1-203ENST00000471658 IL37Q9NZH6 218 aa20.17■□□□□ 0.82
PSPC1-203ENST00000471658 NCANO14594 1321 aa20.17■□□□□ 0.82
PSPC1-203ENST00000471658 TMEM265A0A087WTH1 108 aa20.16■□□□□ 0.82
PSPC1-203ENST00000471658 YJEFN3A6XGL0 299 aa20.16■□□□□ 0.82
PSPC1-203ENST00000471658 E7ENQ6 273 aa20.16■□□□□ 0.82
PSPC1-203ENST00000471658 BUB1O43683 1085 aa20.16■□□□□ 0.82
PSPC1-203ENST00000471658 HMGA1P17096 107 aaKnown RBP20.16■□□□□ 0.82
PSPC1-203ENST00000471658 SNX16P57768 344 aa20.16■□□□□ 0.82
PSPC1-203ENST00000471658 RNASE9P60153 205 aaKnown RBP20.16■□□□□ 0.82
PSPC1-203ENST00000471658 RPL7AP62424 266 aaKnown RBP20.16■□□□□ 0.82
PSPC1-203ENST00000471658 PPP1R15BQ5SWA1 713 aa20.16■□□□□ 0.82
PSPC1-203ENST00000471658 ZNF697Q5TEC3 545 aa20.16■□□□□ 0.82
PSPC1-203ENST00000471658 DNAJC24Q6P3W2 148 aa20.16■□□□□ 0.82
PSPC1-203ENST00000471658 C3orf20Q8ND61 904 aa20.16■□□□□ 0.82
PSPC1-203ENST00000471658 BTBD6Q96KE9 485 aa20.16■□□□□ 0.82
PSPC1-203ENST00000471658 SELENOOQ9BVL4 669 aa20.16■□□□□ 0.82
PSPC1-203ENST00000471658 NSUN3Q9H649 340 aaKnown RBP20.16■□□□□ 0.82
PSPC1-203ENST00000471658 CNGB3Q9NQW8 809 aa20.16■□□□□ 0.82
PSPC1-203ENST00000471658 PARVAQ9NVD7 372 aa20.16■□□□□ 0.82
PSPC1-203ENST00000471658 CTTNBP2NLQ9P2B4 639 aa20.16■□□□□ 0.82
PSPC1-203ENST00000471658 WDR35Q9P2L0 1181 aa20.16■□□□□ 0.82
PSPC1-203ENST00000471658 GUCA1BQ9UMX6 200 aa20.16■□□□□ 0.82
PSPC1-203ENST00000471658 MACROD2A1Z1Q3 448 aa20.16■□□□□ 0.82
PSPC1-203ENST00000471658 CCL16O15467 120 aa20.16■□□□□ 0.82
PSPC1-203ENST00000471658 YWHAQP27348 245 aa20.16■□□□□ 0.82
PSPC1-203ENST00000471658 EPHB3P54753 998 aa20.16■□□□□ 0.82
PSPC1-203ENST00000471658 GSCP56915 257 aaPredicted RBP20.16■□□□□ 0.82
PSPC1-203ENST00000471658 HYAL1Q12794 435 aa20.16■□□□□ 0.82
PSPC1-203ENST00000471658 KCNC3Q14003 757 aa20.16■□□□□ 0.82
PSPC1-203ENST00000471658 DNAJB7Q7Z6W7 309 aaPredicted RBP20.16■□□□□ 0.82
PSPC1-203ENST00000471658 EMC1Q8N766 993 aa20.16■□□□□ 0.82
PSPC1-203ENST00000471658 RFFLQ8WZ73 363 aa20.16■□□□□ 0.82
PSPC1-203ENST00000471658 PLEKHA4Q9H4M7 779 aa20.16■□□□□ 0.82
PSPC1-203ENST00000471658 PATJQ8NI35 1801 aa20.16■□□□□ 0.82
PSPC1-203ENST00000471658 SIGLEC16A6NMB1 481 aa20.15■□□□□ 0.82
PSPC1-203ENST00000471658 LINC01565O15544 149 aa20.15■□□□□ 0.82
PSPC1-203ENST00000471658 ZMYND10O75800 440 aa20.15■□□□□ 0.82
PSPC1-203ENST00000471658 FBXO21O94952 628 aa20.15■□□□□ 0.82
PSPC1-203ENST00000471658 C1RP00736 705 aa20.15■□□□□ 0.82
PSPC1-203ENST00000471658 LRG1P02750 347 aa20.15■□□□□ 0.82
PSPC1-203ENST00000471658 KRT3P12035 628 aa20.15■□□□□ 0.82
PSPC1-203ENST00000471658 RFC1P35251 1148 aaPredicted RBP20.15■□□□□ 0.82
PSPC1-203ENST00000471658 NOP2P46087 812 aaKnown RBP20.15■□□□□ 0.82
PSPC1-203ENST00000471658 TAF10Q12962 218 aa20.15■□□□□ 0.82
PSPC1-203ENST00000471658 PPM1LQ5SGD2 360 aa20.15■□□□□ 0.82
PSPC1-203ENST00000471658 TRNP1Q6NT89 227 aa20.15■□□□□ 0.82
PSPC1-203ENST00000471658 SCD5Q86SK9 330 aa20.15■□□□□ 0.82
PSPC1-203ENST00000471658 ZDHHC17Q8IUH5 632 aa20.15■□□□□ 0.82
PSPC1-203ENST00000471658 C12orf76Q8N812 135 aaPredicted RBP20.15■□□□□ 0.82
PSPC1-203ENST00000471658 MCEEQ96PE7 176 aa20.15■□□□□ 0.82
PSPC1-203ENST00000471658 IRX2Q9BZI1 471 aaPredicted RBP20.15■□□□□ 0.82
PSPC1-203ENST00000471658 NMUR1Q9HB89 426 aa20.15■□□□□ 0.82
PSPC1-203ENST00000471658 ZNF334Q9HCZ1 680 aaPredicted RBP20.15■□□□□ 0.82
PSPC1-203ENST00000471658 GMIPQ9P107 970 aa20.15■□□□□ 0.82
PSPC1-203ENST00000471658 TMEM59LQ9UK28 342 aa20.15■□□□□ 0.82
PSPC1-203ENST00000471658 SCML2Q9UQR0 700 aa20.15■□□□□ 0.82
PSPC1-203ENST00000471658 MTCH2Q9Y6C9 303 aa20.15■□□□□ 0.82
PSPC1-203ENST00000471658 BTNL10A8MVZ5 291 aa20.14■□□□□ 0.81
PSPC1-203ENST00000471658 RTN3O95197 1032 aaPredicted RBP20.14■□□□□ 0.81
PSPC1-203ENST00000471658 MOCS3O95396 460 aa20.14■□□□□ 0.81
PSPC1-203ENST00000471658 CSH1P0DML2 217 aa20.14■□□□□ 0.81
PSPC1-203ENST00000471658 CSH2P0DML3 217 aa20.14■□□□□ 0.81
PSPC1-203ENST00000471658 ZNF662Q6ZS27 426 aa20.14■□□□□ 0.81
PSPC1-203ENST00000471658 HS6ST3Q8IZP7 471 aa20.14■□□□□ 0.81
PSPC1-203ENST00000471658 ZNF564Q8TBZ8 553 aaPredicted RBP20.14■□□□□ 0.81
PSPC1-203ENST00000471658 FBXO32Q969P5 355 aa20.14■□□□□ 0.81
PSPC1-203ENST00000471658 FAM149B1Q96BN6 582 aa20.14■□□□□ 0.81
PSPC1-203ENST00000471658 TTLL2Q9BWV7 592 aa20.14■□□□□ 0.81
PSPC1-203ENST00000471658 A0A0A6YYK5 440 aaPredicted RBP20.13■□□□□ 0.81
PSPC1-203ENST00000471658 A0A1W2PQH9 124 aa20.13■□□□□ 0.81
PSPC1-203ENST00000471658 FAM92AA1XBS5 289 aa20.13■□□□□ 0.81
PSPC1-203ENST00000471658 TMEM191CA6NGB0 347 aa20.13■□□□□ 0.81
PSPC1-203ENST00000471658 KRT86O43790 486 aa20.13■□□□□ 0.81
PSPC1-203ENST00000471658 FYNP06241 537 aa20.13■□□□□ 0.81
PSPC1-203ENST00000471658 IGFBP4P22692 258 aa20.13■□□□□ 0.81
Retrieved 100 of 20,778 RNA–protein pairs in 23.6 ms