RNA–Protein interactions for RNA: ENST00000471342.1

SF3A1-207, Transcript of splicing factor 3a subunit 1, humanhuman

TSL 2

Gene SF3A1, Length 459 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3A1-207ENST00000471342 KIAA1841Q6NSI8 718 aa10.42□□□□□ -0.74
SF3A1-207ENST00000471342 GAREM2Q75VX8 874 aa10.42□□□□□ -0.74
SF3A1-207ENST00000471342 Q7L0L9 218 aa10.42□□□□□ -0.74
SF3A1-207ENST00000471342 ARCQ7LC44 396 aa10.42□□□□□ -0.74
SF3A1-207ENST00000471342 SLFN11Q7Z7L1 901 aa10.42□□□□□ -0.74
SF3A1-207ENST00000471342 SPATA2LQ8IUW3 424 aaPredicted RBP10.42□□□□□ -0.74
SF3A1-207ENST00000471342 HS6ST3Q8IZP7 471 aa10.42□□□□□ -0.74
SF3A1-207ENST00000471342 CCAR2Q8N163 923 aaKnown RBP10.42□□□□□ -0.74
SF3A1-207ENST00000471342 LRRC57Q8N9N7 239 aa10.42□□□□□ -0.74
SF3A1-207ENST00000471342 KREMEN2Q8NCW0 462 aa10.42□□□□□ -0.74
SF3A1-207ENST00000471342 CCDC112Q8NEF3 446 aa10.42□□□□□ -0.74
SF3A1-207ENST00000471342 RIN3Q8TB24 985 aa10.42□□□□□ -0.74
SF3A1-207ENST00000471342 SLC2A13Q96QE2 648 aa10.42□□□□□ -0.74
SF3A1-207ENST00000471342 C11orf70Q9BRQ4 267 aa10.42□□□□□ -0.74
SF3A1-207ENST00000471342 ULBP1Q9BZM6 244 aa10.42□□□□□ -0.74
SF3A1-207ENST00000471342 DMAP1Q9NPF5 467 aaPredicted RBP10.42□□□□□ -0.74
SF3A1-207ENST00000471342 LMCD1Q9NZU5 365 aa10.42□□□□□ -0.74
SF3A1-207ENST00000471342 PATJQ8NI35 1801 aa10.42□□□□□ -0.74
SF3A1-207ENST00000471342 PRUNE2Q8WUY3 3088 aa10.42□□□□□ -0.74
SF3A1-207ENST00000471342 C2CD4BA6NLJ0 364 aa10.41□□□□□ -0.74
SF3A1-207ENST00000471342 SIGLEC16A6NMB1 481 aa10.41□□□□□ -0.74
SF3A1-207ENST00000471342 CSPG5O95196 566 aa10.41□□□□□ -0.74
SF3A1-207ENST00000471342 CCDC172P0C7W6 258 aa10.41□□□□□ -0.74
SF3A1-207ENST00000471342 CPB1P15086 417 aa10.41□□□□□ -0.74
SF3A1-207ENST00000471342 TCF4P15884 667 aa10.41□□□□□ -0.74
SF3A1-207ENST00000471342 SCNN1AP37088 669 aa10.41□□□□□ -0.74
SF3A1-207ENST00000471342 MAGEA1P43355 309 aa10.41□□□□□ -0.74
SF3A1-207ENST00000471342 TKTL1P51854 596 aa10.41□□□□□ -0.74
SF3A1-207ENST00000471342 MRPS5P82675 430 aaKnown RBP10.41□□□□□ -0.74
SF3A1-207ENST00000471342 SLC5A9Q2M3M2 681 aa10.41□□□□□ -0.74
SF3A1-207ENST00000471342 SH3PXD2AQ5TCZ1 1133 aa10.41□□□□□ -0.74
SF3A1-207ENST00000471342 SYPL2Q5VXT5 272 aa10.41□□□□□ -0.74
SF3A1-207ENST00000471342 C4orf50Q6ZRC1 276 aa10.41□□□□□ -0.74
SF3A1-207ENST00000471342 SLC26A9Q7LBE3 791 aa10.41□□□□□ -0.74
SF3A1-207ENST00000471342 DNAJB7Q7Z6W7 309 aaPredicted RBP10.41□□□□□ -0.74
SF3A1-207ENST00000471342 RBM23Q86U06 439 aaKnown RBP10.41□□□□□ -0.74
SF3A1-207ENST00000471342 FMNL3Q8IVF7 1028 aa10.41□□□□□ -0.74
SF3A1-207ENST00000471342 NUP93Q8N1F7 819 aa10.41□□□□□ -0.74
SF3A1-207ENST00000471342 C12orf76Q8N812 135 aaPredicted RBP10.41□□□□□ -0.74
SF3A1-207ENST00000471342 C3orf20Q8ND61 904 aa10.41□□□□□ -0.74
SF3A1-207ENST00000471342 ADAMTS19Q8TE59 1207 aa10.41□□□□□ -0.74
SF3A1-207ENST00000471342 GIPC2Q8TF65 315 aa10.41□□□□□ -0.74
SF3A1-207ENST00000471342 CENPIQ92674 756 aaPredicted RBP10.41□□□□□ -0.74
SF3A1-207ENST00000471342 MSLNLQ96KJ4 702 aa10.41□□□□□ -0.74
SF3A1-207ENST00000471342 ZFRQ96KR1 1074 aaKnown RBP10.41□□□□□ -0.74
SF3A1-207ENST00000471342 CEP295NLQ96MC4 621 aa10.41□□□□□ -0.74
SF3A1-207ENST00000471342 CYP4F11Q9HBI6 524 aa10.41□□□□□ -0.74
SF3A1-207ENST00000471342 ZNHIT6Q9NWK9 470 aaKnown RBP10.41□□□□□ -0.74
SF3A1-207ENST00000471342 HCFC1R1Q9NWW0 138 aa10.41□□□□□ -0.74
SF3A1-207ENST00000471342 ADAM22Q9P0K1 906 aa10.41□□□□□ -0.74
SF3A1-207ENST00000471342 DNMT3BQ9UBC3 853 aaKnown RBP10.41□□□□□ -0.74
SF3A1-207ENST00000471342 SCML2Q9UQR0 700 aa10.41□□□□□ -0.74
SF3A1-207ENST00000471342 SSX2IPQ9Y2D8 614 aa10.41□□□□□ -0.74
SF3A1-207ENST00000471342 ZKSCAN5Q9Y2L8 839 aa10.41□□□□□ -0.74
SF3A1-207ENST00000471342 PRRC2BQ5JSZ5 2229 aaKnown RBP10.4□□□□□ -0.74
SF3A1-207ENST00000471342 A0A0A6YYK5 440 aaPredicted RBP10.4□□□□□ -0.74
SF3A1-207ENST00000471342 GRID2IPA4D2P6 1211 aa10.4□□□□□ -0.74
SF3A1-207ENST00000471342 AKR1B10O60218 316 aa10.4□□□□□ -0.74
SF3A1-207ENST00000471342 TBX10O75333 385 aa10.4□□□□□ -0.74
SF3A1-207ENST00000471342 ENDOD1O94919 500 aa10.4□□□□□ -0.74
SF3A1-207ENST00000471342 OLFM2O95897 454 aa10.4□□□□□ -0.74
SF3A1-207ENST00000471342 C8AP07357 584 aa10.4□□□□□ -0.74
SF3A1-207ENST00000471342 TPM1P09493 284 aa10.4□□□□□ -0.74
SF3A1-207ENST00000471342 H2AFZP0C0S5 128 aa10.4□□□□□ -0.74
SF3A1-207ENST00000471342 USP17L7P0C7H9 530 aa10.4□□□□□ -0.74
SF3A1-207ENST00000471342 KLRC2P26717 231 aa10.4□□□□□ -0.74
SF3A1-207ENST00000471342 HOXA9P31269 272 aa10.4□□□□□ -0.74
SF3A1-207ENST00000471342 NRIP1P48552 1158 aa10.4□□□□□ -0.74
SF3A1-207ENST00000471342 NTHL1P78549 312 aa10.4□□□□□ -0.74
SF3A1-207ENST00000471342 SLC6A3Q01959 620 aa10.4□□□□□ -0.74
SF3A1-207ENST00000471342 CREMQ03060 361 aa10.4□□□□□ -0.74
SF3A1-207ENST00000471342 ADIGQ0VDE8 80 aa10.4□□□□□ -0.74
SF3A1-207ENST00000471342 TWF1Q12792 350 aa10.4□□□□□ -0.74
SF3A1-207ENST00000471342 CCDC14Q49A88 953 aa10.4□□□□□ -0.74
SF3A1-207ENST00000471342 GPR153Q6NV75 609 aa10.4□□□□□ -0.74
SF3A1-207ENST00000471342 H2AFVQ71UI9 128 aa10.4□□□□□ -0.74
SF3A1-207ENST00000471342 BEND5Q7L4P6 421 aa10.4□□□□□ -0.74
SF3A1-207ENST00000471342 ANKS1BQ7Z6G8 1248 aa10.4□□□□□ -0.74
SF3A1-207ENST00000471342 ZNF276Q8N554 614 aa10.4□□□□□ -0.74
SF3A1-207ENST00000471342 EFHBQ8N7U6 833 aa10.4□□□□□ -0.74
SF3A1-207ENST00000471342 CMASQ8NFW8 434 aaPredicted RBP10.4□□□□□ -0.74
SF3A1-207ENST00000471342 SLC7A14Q8TBB6 771 aa10.4□□□□□ -0.74
SF3A1-207ENST00000471342 SLC35G2Q8TBE7 412 aa10.4□□□□□ -0.74
SF3A1-207ENST00000471342 HDAC7Q8WUI4 952 aa10.4□□□□□ -0.74
SF3A1-207ENST00000471342 CD101Q93033 1021 aa10.4□□□□□ -0.74
SF3A1-207ENST00000471342 WBP2Q969T9 261 aa10.4□□□□□ -0.74
SF3A1-207ENST00000471342 PSMG2Q969U7 264 aa10.4□□□□□ -0.74
SF3A1-207ENST00000471342 C18orf8Q96DM3 657 aa10.4□□□□□ -0.74
SF3A1-207ENST00000471342 TRMT2BQ96GJ1 504 aaKnown RBP10.4□□□□□ -0.74
SF3A1-207ENST00000471342 BTBD6Q96KE9 485 aa10.4□□□□□ -0.74
SF3A1-207ENST00000471342 SLC22A12Q96S37 553 aa10.4□□□□□ -0.74
SF3A1-207ENST00000471342 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP10.4□□□□□ -0.74
SF3A1-207ENST00000471342 DDX23Q9BUQ8 820 aaKnown RBP10.4□□□□□ -0.74
SF3A1-207ENST00000471342 MAGEB5Q9BZ81 275 aa10.4□□□□□ -0.74
SF3A1-207ENST00000471342 GOLPH3Q9H4A6 298 aa10.4□□□□□ -0.74
SF3A1-207ENST00000471342 ENTPD7Q9NQZ7 604 aa10.4□□□□□ -0.74
SF3A1-207ENST00000471342 CAPN6Q9Y6Q1 641 aa10.4□□□□□ -0.74
SF3A1-207ENST00000471342 GREB1Q4ZG55 1949 aa10.4□□□□□ -0.74
SF3A1-207ENST00000471342 ZNF840PA6NDX5 716 aa10.39□□□□□ -0.75
SF3A1-207ENST00000471342 GOLGA6L6A8MZA4 724 aa10.39□□□□□ -0.75
Retrieved 100 of 20,778 RNA–protein pairs in 25.1 ms