RNA–Protein interactions for RNA: ENST00000471260.1

HMGN1-211, Transcript of high mobility group nucleosome binding domain 1, humanhuman

TSL 3

Gene HMGN1, Length 615 nt, Biotype processed transcript, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN1-211ENST00000471260 TIGD1Q96MW7 591 aa14.31□□□□□ -0.12
HMGN1-211ENST00000471260 KCNK16Q96T55 309 aa14.31□□□□□ -0.12
HMGN1-211ENST00000471260 P2RY13Q9BPV8 354 aa14.31□□□□□ -0.12
HMGN1-211ENST00000471260 FBXO44Q9H4M3 255 aa14.31□□□□□ -0.12
HMGN1-211ENST00000471260 FAM124BQ9H5Z6 455 aaPredicted RBP14.31□□□□□ -0.12
HMGN1-211ENST00000471260 CSNK1G1Q9HCP0 422 aa14.31□□□□□ -0.12
HMGN1-211ENST00000471260 NCDNQ9UBB6 729 aa14.31□□□□□ -0.12
HMGN1-211ENST00000471260 RAB23Q9ULC3 237 aa14.31□□□□□ -0.12
HMGN1-211ENST00000471260 SMG5Q9UPR3 1016 aaKnown RBP14.31□□□□□ -0.12
HMGN1-211ENST00000471260 CETN3O15182 167 aa14.3□□□□□ -0.12
HMGN1-211ENST00000471260 AP1G2O75843 785 aa14.3□□□□□ -0.12
HMGN1-211ENST00000471260 SMC2O95347 1197 aa14.3□□□□□ -0.12
HMGN1-211ENST00000471260 ABL1P00519 1130 aa14.3□□□□□ -0.12
HMGN1-211ENST00000471260 GCLMP48507 274 aa14.3□□□□□ -0.12
HMGN1-211ENST00000471260 SLC5A3P53794 718 aa14.3□□□□□ -0.12
HMGN1-211ENST00000471260 FOXK2Q01167 660 aa14.3□□□□□ -0.12
HMGN1-211ENST00000471260 PPP3CAQ08209 521 aa14.3□□□□□ -0.12
HMGN1-211ENST00000471260 ZNF658Q5TYW1 1059 aaPredicted RBP14.3□□□□□ -0.12
HMGN1-211ENST00000471260 TTC39CQ8N584 583 aa14.3□□□□□ -0.12
HMGN1-211ENST00000471260 ENGASEQ8NFI3 743 aa14.3□□□□□ -0.12
HMGN1-211ENST00000471260 TAS1R2Q8TE23 839 aa14.3□□□□□ -0.12
HMGN1-211ENST00000471260 CD101Q93033 1021 aa14.3□□□□□ -0.12
HMGN1-211ENST00000471260 FBXO32Q969P5 355 aa14.3□□□□□ -0.12
HMGN1-211ENST00000471260 DUSP9Q99956 384 aaKnown RBP14.3□□□□□ -0.12
HMGN1-211ENST00000471260 NT5C1AQ9BXI3 368 aa14.3□□□□□ -0.12
HMGN1-211ENST00000471260 NIF3L1Q9GZT8 377 aa14.3□□□□□ -0.12
HMGN1-211ENST00000471260 RNF38Q9H0F5 515 aa14.3□□□□□ -0.12
HMGN1-211ENST00000471260 TBC1D14Q9P2M4 693 aa14.3□□□□□ -0.12
HMGN1-211ENST00000471260 WNT6Q9Y6F9 365 aa14.3□□□□□ -0.12
HMGN1-211ENST00000471260 TRIM49P0CI25 452 aa14.29□□□□□ -0.12
HMGN1-211ENST00000471260 TRIM49CP0CI26 452 aa14.29□□□□□ -0.12
HMGN1-211ENST00000471260 EPB41P11171 864 aaKnown RBP14.29□□□□□ -0.12
HMGN1-211ENST00000471260 PRCPP42785 496 aa14.29□□□□□ -0.12
HMGN1-211ENST00000471260 ID4P47928 161 aa14.29□□□□□ -0.12
HMGN1-211ENST00000471260 ZXDBP98169 803 aa14.29□□□□□ -0.12
HMGN1-211ENST00000471260 FKBP3Q00688 224 aaKnown RBP14.29□□□□□ -0.12
HMGN1-211ENST00000471260 PNOCQ13519 176 aa14.29□□□□□ -0.12
HMGN1-211ENST00000471260 HECTD3Q5T447 861 aa14.29□□□□□ -0.12
HMGN1-211ENST00000471260 SPOPLQ6IQ16 392 aa14.29□□□□□ -0.12
HMGN1-211ENST00000471260 WDR5BQ86VZ2 330 aa14.29□□□□□ -0.12
HMGN1-211ENST00000471260 ADGRG2Q8IZP9 1017 aa14.29□□□□□ -0.12
HMGN1-211ENST00000471260 CAMKK1Q8N5S9 505 aa14.29□□□□□ -0.12
HMGN1-211ENST00000471260 SLC2A14Q8TDB8 520 aa14.29□□□□□ -0.12
HMGN1-211ENST00000471260 OTUB2Q96DC9 234 aa14.29□□□□□ -0.12
HMGN1-211ENST00000471260 HNRNPABQ99729 332 aaKnown RBP14.29□□□□□ -0.12
HMGN1-211ENST00000471260 TSG101Q99816 390 aa14.29□□□□□ -0.12
HMGN1-211ENST00000471260 LINC00597Q9H2U6 94 aa14.29□□□□□ -0.12
HMGN1-211ENST00000471260 PNPLA8Q9NP80 782 aa14.29□□□□□ -0.12
HMGN1-211ENST00000471260 KRT82Q9NSB4 513 aa14.29□□□□□ -0.12
HMGN1-211ENST00000471260 GMEB2Q9UKD1 530 aa14.29□□□□□ -0.12
HMGN1-211ENST00000471260 CPQQ9Y646 472 aa14.29□□□□□ -0.12
HMGN1-211ENST00000471260 E2F8A0AVK6 867 aa14.28□□□□□ -0.12
HMGN1-211ENST00000471260 EGFP01133 1207 aa14.28□□□□□ -0.12
HMGN1-211ENST00000471260 ZDHHC11BP0C7U3 371 aa14.28□□□□□ -0.12
HMGN1-211ENST00000471260 FAM200BP0CF97 657 aa14.28□□□□□ -0.12
HMGN1-211ENST00000471260 MBL2P11226 248 aaPredicted RBP14.28□□□□□ -0.12
HMGN1-211ENST00000471260 EIF2DP41214 584 aaKnown RBP14.28□□□□□ -0.12
HMGN1-211ENST00000471260 PPP1R2P41236 205 aa14.28□□□□□ -0.12
HMGN1-211ENST00000471260 HELZP42694 1942 aaKnown RBP14.28□□□□□ -0.12
HMGN1-211ENST00000471260 LRRC63Q05C16 580 aa14.28□□□□□ -0.12
HMGN1-211ENST00000471260 IFRD2Q12894 506 aaPredicted RBP14.28□□□□□ -0.12
HMGN1-211ENST00000471260 LAIR1Q6GTX8 287 aa14.28□□□□□ -0.12
HMGN1-211ENST00000471260 ERMP1Q7Z2K6 904 aa14.28□□□□□ -0.12
HMGN1-211ENST00000471260 KIAA2013Q8IYS2 634 aa14.28□□□□□ -0.12
HMGN1-211ENST00000471260 FBXL13Q8NEE6 735 aa14.28□□□□□ -0.12
HMGN1-211ENST00000471260 TTC16Q8NEE8 873 aa14.28□□□□□ -0.12
HMGN1-211ENST00000471260 ZMIZ2Q8NF64 920 aa14.28□□□□□ -0.12
HMGN1-211ENST00000471260 SCAMP5Q8TAC9 235 aa14.28□□□□□ -0.12
HMGN1-211ENST00000471260 SMARCE1Q969G3 411 aa14.28□□□□□ -0.12
HMGN1-211ENST00000471260 ELMO3Q96BJ8 720 aa14.28□□□□□ -0.12
HMGN1-211ENST00000471260 CYFIP2Q96F07 1278 aa14.28□□□□□ -0.12
HMGN1-211ENST00000471260 NAP1L5Q96NT1 182 aaPredicted RBP14.28□□□□□ -0.12
HMGN1-211ENST00000471260 SMOQ99835 787 aa14.28□□□□□ -0.12
HMGN1-211ENST00000471260 APOBEC3GQ9HC16 384 aaKnown RBP14.28□□□□□ -0.12
HMGN1-211ENST00000471260 FBRSL1Q9HCM7 1045 aaKnown RBP14.28□□□□□ -0.12
HMGN1-211ENST00000471260 CHORDC1Q9UHD1 332 aaPredicted RBP14.28□□□□□ -0.12
HMGN1-211ENST00000471260 SLC8A2Q9UPR5 921 aa14.28□□□□□ -0.12
HMGN1-211ENST00000471260 GPR179Q6PRD1 2367 aa14.27□□□□□ -0.12
HMGN1-211ENST00000471260 SLC16A3O15427 465 aaKnown RBP14.27□□□□□ -0.13
HMGN1-211ENST00000471260 LRP3O75074 770 aa14.27□□□□□ -0.13
HMGN1-211ENST00000471260 RNF40O75150 1001 aa14.27□□□□□ -0.13
HMGN1-211ENST00000471260 CILPO75339 1184 aa14.27□□□□□ -0.13
HMGN1-211ENST00000471260 TPM3P06753 285 aa14.27□□□□□ -0.13
HMGN1-211ENST00000471260 CCDC130P13994 396 aa14.27□□□□□ -0.13
HMGN1-211ENST00000471260 SDHBP21912 280 aa14.27□□□□□ -0.13
HMGN1-211ENST00000471260 FNTBP49356 437 aa14.27□□□□□ -0.13
HMGN1-211ENST00000471260 MXI1P50539 228 aa14.27□□□□□ -0.13
HMGN1-211ENST00000471260 MAP3K7CLP57077 242 aa14.27□□□□□ -0.13
HMGN1-211ENST00000471260 SIM2Q14190 667 aaPredicted RBP14.27□□□□□ -0.13
HMGN1-211ENST00000471260 SYT13Q7L8C5 426 aa14.27□□□□□ -0.13
HMGN1-211ENST00000471260 FILIP1Q7Z7B0 1213 aa14.27□□□□□ -0.13
HMGN1-211ENST00000471260 ZC3H3Q8IXZ2 948 aaKnown RBP14.27□□□□□ -0.13
HMGN1-211ENST00000471260 SMYD4Q8IYR2 804 aaPredicted RBP14.27□□□□□ -0.13
HMGN1-211ENST00000471260 DCLK2Q8N568 766 aa14.27□□□□□ -0.13
HMGN1-211ENST00000471260 C12orf29Q8N999 325 aa14.27□□□□□ -0.13
HMGN1-211ENST00000471260 ACDQ96AP0 544 aa14.27□□□□□ -0.13
HMGN1-211ENST00000471260 TLR8Q9NR97 1041 aaKnown RBP14.27□□□□□ -0.13
HMGN1-211ENST00000471260 RAB20Q9NX57 234 aa14.27□□□□□ -0.13
HMGN1-211ENST00000471260 HMGXB4Q9UGU5 601 aa14.27□□□□□ -0.13
HMGN1-211ENST00000471260 PCDHA5Q9Y5H7 936 aa14.27□□□□□ -0.13
Retrieved 100 of 20,778 RNA–protein pairs in 21.8 ms