RNA–Protein interactions for RNA: ENST00000471235.1

HDAC7-220, Transcript of histone deacetylase 7, humanhuman

TSL 2

Gene HDAC7, Length 1,012 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC7-220ENST00000471235 FAM71AQ8IYT1 594 aa20.83■□□□□ 0.93
HDAC7-220ENST00000471235 SECISBP2LQ93073 1101 aaKnown RBP20.83■□□□□ 0.93
HDAC7-220ENST00000471235 RTN4Q9NQC3 1192 aaKnown RBP20.83■□□□□ 0.93
HDAC7-220ENST00000471235 SCML2Q9UQR0 700 aa20.83■□□□□ 0.93
HDAC7-220ENST00000471235 A0A1B0GTH6 734 aa20.82■□□□□ 0.92
HDAC7-220ENST00000471235 F8VZ95 297 aa20.82■□□□□ 0.92
HDAC7-220ENST00000471235 GOLGA6L19H0YKK7 550 aa20.82■□□□□ 0.92
HDAC7-220ENST00000471235 TEX33O43247 280 aa20.82■□□□□ 0.92
HDAC7-220ENST00000471235 OLFM2O95897 454 aa20.82■□□□□ 0.92
HDAC7-220ENST00000471235 ABL1P00519 1130 aa20.82■□□□□ 0.92
HDAC7-220ENST00000471235 OAS1P00973 400 aaKnown RBP20.82■□□□□ 0.92
HDAC7-220ENST00000471235 CKMP06732 381 aa20.82■□□□□ 0.92
HDAC7-220ENST00000471235 PGFP49763 221 aa20.82■□□□□ 0.92
HDAC7-220ENST00000471235 POLR2FP61218 127 aaKnown RBP20.82■□□□□ 0.92
HDAC7-220ENST00000471235 SIGLEC14Q08ET2 396 aa20.82■□□□□ 0.92
HDAC7-220ENST00000471235 DENND1BQ6P3S1 775 aa20.82■□□□□ 0.92
HDAC7-220ENST00000471235 CCDC186Q7Z3E2 898 aa20.82■□□□□ 0.92
HDAC7-220ENST00000471235 ARL14EPQ8N8R7 260 aaPredicted RBP20.82■□□□□ 0.92
HDAC7-220ENST00000471235 DEPDC1BQ8WUY9 529 aa20.82■□□□□ 0.92
HDAC7-220ENST00000471235 ZNF606Q8WXB4 792 aa20.82■□□□□ 0.92
HDAC7-220ENST00000471235 USP13Q92995 863 aaPredicted RBP20.82■□□□□ 0.92
HDAC7-220ENST00000471235 E2F7Q96AV8 911 aa20.82■□□□□ 0.92
HDAC7-220ENST00000471235 PCMTD1Q96MG8 357 aaPredicted RBP20.82■□□□□ 0.92
HDAC7-220ENST00000471235 OBP2AQ9NY56 170 aa20.82■□□□□ 0.92
HDAC7-220ENST00000471235 CCL26Q9Y258 94 aa20.82■□□□□ 0.92
HDAC7-220ENST00000471235 USP3Q9Y6I4 520 aa20.82■□□□□ 0.92
HDAC7-220ENST00000471235 MED7O43513 233 aa20.81■□□□□ 0.92
HDAC7-220ENST00000471235 USP17L7P0C7H9 530 aa20.81■□□□□ 0.92
HDAC7-220ENST00000471235 PFKLP17858 780 aa20.81■□□□□ 0.92
HDAC7-220ENST00000471235 CLCN1P35523 988 aa20.81■□□□□ 0.92
HDAC7-220ENST00000471235 ZNF268Q14587 947 aaPredicted RBP20.81■□□□□ 0.92
HDAC7-220ENST00000471235 MEA1Q16626 185 aa20.81■□□□□ 0.92
HDAC7-220ENST00000471235 FILIP1LQ4L180 1135 aa20.81■□□□□ 0.92
HDAC7-220ENST00000471235 SNX30Q5VWJ9 437 aa20.81■□□□□ 0.92
HDAC7-220ENST00000471235 SLC47A2Q86VL8 602 aa20.81■□□□□ 0.92
HDAC7-220ENST00000471235 NEK11Q8NG66 645 aa20.81■□□□□ 0.92
HDAC7-220ENST00000471235 RIN3Q8TB24 985 aa20.81■□□□□ 0.92
HDAC7-220ENST00000471235 LRRC3BQ96PB8 259 aa20.81■□□□□ 0.92
HDAC7-220ENST00000471235 CYP2S1Q96SQ9 504 aa20.81■□□□□ 0.92
HDAC7-220ENST00000471235 STK33Q9BYT3 514 aa20.81■□□□□ 0.92
HDAC7-220ENST00000471235 KIF9Q9HAQ2 790 aa20.81■□□□□ 0.92
HDAC7-220ENST00000471235 NLRC4Q9NPP4 1024 aa20.81■□□□□ 0.92
HDAC7-220ENST00000471235 SLC2A4RGQ9NR83 387 aa20.81■□□□□ 0.92
HDAC7-220ENST00000471235 CHORDC1Q9UHD1 332 aaPredicted RBP20.81■□□□□ 0.92
HDAC7-220ENST00000471235 DAAM1Q9Y4D1 1078 aa20.81■□□□□ 0.92
HDAC7-220ENST00000471235 DPYSL4O14531 572 aa20.8■□□□□ 0.92
HDAC7-220ENST00000471235 SERPINC1P01008 464 aa20.8■□□□□ 0.92
HDAC7-220ENST00000471235 CFHP08603 1231 aa20.8■□□□□ 0.92
HDAC7-220ENST00000471235 PSMC3P17980 439 aa20.8■□□□□ 0.92
HDAC7-220ENST00000471235 RGS7P49802 495 aa20.8■□□□□ 0.92
HDAC7-220ENST00000471235 PDE6CP51160 858 aa20.8■□□□□ 0.92
HDAC7-220ENST00000471235 TKTL1P51854 596 aa20.8■□□□□ 0.92
HDAC7-220ENST00000471235 JAM2P57087 298 aa20.8■□□□□ 0.92
HDAC7-220ENST00000471235 ZNF445P59923 1031 aa20.8■□□□□ 0.92
HDAC7-220ENST00000471235 GPC5P78333 572 aa20.8■□□□□ 0.92
HDAC7-220ENST00000471235 PTK2Q05397 1052 aa20.8■□□□□ 0.92
HDAC7-220ENST00000471235 ADIGQ0VDE8 80 aa20.8■□□□□ 0.92
HDAC7-220ENST00000471235 USP4Q13107 963 aa20.8■□□□□ 0.92
HDAC7-220ENST00000471235 TRIM67Q6ZTA4 783 aa20.8■□□□□ 0.92
HDAC7-220ENST00000471235 MFSD6LQ8IWD5 586 aa20.8■□□□□ 0.92
HDAC7-220ENST00000471235 CELF5Q8N6W0 485 aaKnown RBP20.8■□□□□ 0.92
HDAC7-220ENST00000471235 SLC35F5Q8WV83 523 aa20.8■□□□□ 0.92
HDAC7-220ENST00000471235 KCTD13Q8WZ19 329 aa20.8■□□□□ 0.92
HDAC7-220ENST00000471235 ASIC4Q96FT7 647 aa20.8■□□□□ 0.92
HDAC7-220ENST00000471235 NAP1L5Q96NT1 182 aaPredicted RBP20.8■□□□□ 0.92
HDAC7-220ENST00000471235 ULBP1Q9BZM6 244 aa20.8■□□□□ 0.92
HDAC7-220ENST00000471235 CCSER2Q9H7U1 834 aa20.8■□□□□ 0.92
HDAC7-220ENST00000471235 NMUR1Q9HB89 426 aa20.8■□□□□ 0.92
HDAC7-220ENST00000471235 TLR8Q9NR97 1041 aaKnown RBP20.8■□□□□ 0.92
HDAC7-220ENST00000471235 TDP1Q9NUW8 608 aa20.8■□□□□ 0.92
HDAC7-220ENST00000471235 OSER1Q9NX31 292 aa20.8■□□□□ 0.92
HDAC7-220ENST00000471235 MYOFQ9NZM1 2061 aa20.79■□□□□ 0.92
HDAC7-220ENST00000471235 A0A1W2PQH9 124 aa20.79■□□□□ 0.92
HDAC7-220ENST00000471235 FAM86C2PA6NEL3 165 aa20.79■□□□□ 0.92
HDAC7-220ENST00000471235 HDCP19113 662 aa20.79■□□□□ 0.92
HDAC7-220ENST00000471235 TUBP50607 506 aa20.79■□□□□ 0.92
HDAC7-220ENST00000471235 FANCCQ00597 558 aa20.79■□□□□ 0.92
HDAC7-220ENST00000471235 FCHO2Q0JRZ9 810 aa20.79■□□□□ 0.92
HDAC7-220ENST00000471235 HECTD3Q5T447 861 aa20.79■□□□□ 0.92
HDAC7-220ENST00000471235 PMF1Q6P1K2 205 aa20.79■□□□□ 0.92
HDAC7-220ENST00000471235 BHLHA9Q7RTU4 235 aa20.79■□□□□ 0.92
HDAC7-220ENST00000471235 SCD5Q86SK9 330 aa20.79■□□□□ 0.92
HDAC7-220ENST00000471235 BPIFB1Q8TDL5 484 aa20.79■□□□□ 0.92
HDAC7-220ENST00000471235 TRMT61BQ9BVS5 477 aaKnown RBP20.79■□□□□ 0.92
HDAC7-220ENST00000471235 RNF38Q9H0F5 515 aa20.79■□□□□ 0.92
HDAC7-220ENST00000471235 LRRC4Q9HBW1 653 aa20.79■□□□□ 0.92
HDAC7-220ENST00000471235 C11orf16Q9NQ32 467 aa20.79■□□□□ 0.92
HDAC7-220ENST00000471235 ARHGAP26Q9UNA1 814 aa20.79■□□□□ 0.92
HDAC7-220ENST00000471235 TMEM221A6NGB7 291 aa20.78■□□□□ 0.92
HDAC7-220ENST00000471235 M0R296 226 aa20.78■□□□□ 0.92
HDAC7-220ENST00000471235 COCHO43405 550 aa20.78■□□□□ 0.92
HDAC7-220ENST00000471235 GABBR2O75899 941 aa20.78■□□□□ 0.92
HDAC7-220ENST00000471235 GDI1P31150 447 aa20.78■□□□□ 0.92
HDAC7-220ENST00000471235 GPD2P43304 727 aa20.78■□□□□ 0.92
HDAC7-220ENST00000471235 SLC7A9P82251 487 aa20.78■□□□□ 0.92
HDAC7-220ENST00000471235 ZNF77Q15935 545 aa20.78■□□□□ 0.92
HDAC7-220ENST00000471235 CYTH4Q9UIA0 394 aa20.78■□□□□ 0.92
HDAC7-220ENST00000471235 PCDHGC3Q9UN70 934 aa20.78■□□□□ 0.92
HDAC7-220ENST00000471235 KIAA1549LQ6ZVL6 1849 aa20.77■□□□□ 0.92
HDAC7-220ENST00000471235 TLR5O60602 858 aa20.77■□□□□ 0.92
Retrieved 100 of 20,778 RNA–protein pairs in 34 ms