RNA–Protein interactions for RNA: ENST00000470953.1

VARS-222, Transcript of valyl-tRNA synthetase, humanhuman

TSL 3

Gene VARS, Length 392 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VARS-222ENST00000470953 ACADVLP49748 655 aa6.32□□□□□ -1.4
VARS-222ENST00000470953 ERVPABLB-1P60509 514 aa6.32□□□□□ -1.4
VARS-222ENST00000470953 GABREP78334 506 aa6.32□□□□□ -1.4
VARS-222ENST00000470953 MRPS21P82921 87 aaKnown RBP6.32□□□□□ -1.4
VARS-222ENST00000470953 BFSP1Q12934 665 aa6.32□□□□□ -1.4
VARS-222ENST00000470953 PLD1Q13393 1074 aa6.32□□□□□ -1.4
VARS-222ENST00000470953 BYSLQ13895 437 aaKnown RBP6.32□□□□□ -1.4
VARS-222ENST00000470953 NAA30Q147X3 362 aaPredicted RBP6.32□□□□□ -1.4
VARS-222ENST00000470953 MTF1Q14872 753 aa6.32□□□□□ -1.4
VARS-222ENST00000470953 CLCA4Q14CN2 919 aa6.32□□□□□ -1.4
VARS-222ENST00000470953 SUZ12Q15022 739 aaKnown RBP6.32□□□□□ -1.4
VARS-222ENST00000470953 PDGFRLQ15198 375 aa6.32□□□□□ -1.4
VARS-222ENST00000470953 SF3A1Q15459 793 aaKnown RBP6.32□□□□□ -1.4
VARS-222ENST00000470953 TESK1Q15569 626 aa6.32□□□□□ -1.4
VARS-222ENST00000470953 ZNF280DQ6N043 979 aa6.32□□□□□ -1.4
VARS-222ENST00000470953 CC2D1AQ6P1N0 951 aaPredicted RBP6.32□□□□□ -1.4
VARS-222ENST00000470953 ALKAL1Q6UXT8 129 aa6.32□□□□□ -1.4
VARS-222ENST00000470953 SLC36A4Q6YBV0 504 aa6.32□□□□□ -1.4
VARS-222ENST00000470953 KDM7AQ6ZMT4 941 aa6.32□□□□□ -1.4
VARS-222ENST00000470953 DTHD1Q6ZMT9 781 aa6.32□□□□□ -1.4
VARS-222ENST00000470953 PPP4R3CPQ6ZMV5 832 aa6.32□□□□□ -1.4
VARS-222ENST00000470953 ATCAYQ86WG3 371 aa6.32□□□□□ -1.4
VARS-222ENST00000470953 EFCAB13Q8IY85 973 aa6.32□□□□□ -1.4
VARS-222ENST00000470953 CEP120Q8N960 986 aa6.32□□□□□ -1.4
VARS-222ENST00000470953 ENGASEQ8NFI3 743 aa6.32□□□□□ -1.4
VARS-222ENST00000470953 DEPTORQ8TB45 409 aa6.32□□□□□ -1.4
VARS-222ENST00000470953 PIGOQ8TEQ8 1089 aa6.32□□□□□ -1.4
VARS-222ENST00000470953 GIPC2Q8TF65 315 aa6.32□□□□□ -1.4
VARS-222ENST00000470953 OSCP1Q8WVF1 389 aa6.32□□□□□ -1.4
VARS-222ENST00000470953 IFT74Q96LB3 600 aa6.32□□□□□ -1.4
VARS-222ENST00000470953 UROC1Q96N76 676 aa6.32□□□□□ -1.4
VARS-222ENST00000470953 NACC1Q96RE7 527 aa6.32□□□□□ -1.4
VARS-222ENST00000470953 CYP2S1Q96SQ9 504 aa6.32□□□□□ -1.4
VARS-222ENST00000470953 NFKBIZQ9BYH8 718 aa6.32□□□□□ -1.4
VARS-222ENST00000470953 SLC6A17Q9H1V8 727 aa6.32□□□□□ -1.4
VARS-222ENST00000470953 ASCL3Q9NQ33 180 aa6.32□□□□□ -1.4
VARS-222ENST00000470953 FOXD4L1Q9NU39 408 aa6.32□□□□□ -1.4
VARS-222ENST00000470953 LRWD1Q9UFC0 647 aa6.32□□□□□ -1.4
VARS-222ENST00000470953 HCN2Q9UL51 889 aa6.32□□□□□ -1.4
VARS-222ENST00000470953 CYP8B1Q9UNU6 501 aa6.32□□□□□ -1.4
VARS-222ENST00000470953 CLCA2Q9UQC9 943 aa6.32□□□□□ -1.4
VARS-222ENST00000470953 ZNF469Q96JG9 3925 aaPredicted RBP6.32□□□□□ -1.4
VARS-222ENST00000470953 ARHGEF17Q96PE2 2063 aaPredicted RBP6.32□□□□□ -1.4
VARS-222ENST00000470953 A0A1B0GTW7 788 aa6.31□□□□□ -1.4
VARS-222ENST00000470953 VWA3AA6NCI4 1184 aa6.31□□□□□ -1.4
VARS-222ENST00000470953 TULP1O00294 542 aaPredicted RBP6.31□□□□□ -1.4
VARS-222ENST00000470953 N4BP3O15049 544 aa6.31□□□□□ -1.4
VARS-222ENST00000470953 MED24O75448 989 aa6.31□□□□□ -1.4
VARS-222ENST00000470953 DXOO77932 396 aaKnown RBP6.31□□□□□ -1.4
VARS-222ENST00000470953 SLITRK3O94933 977 aa6.31□□□□□ -1.4
VARS-222ENST00000470953 OAZ2O95190 189 aa6.31□□□□□ -1.4
VARS-222ENST00000470953 LYPLA2O95372 231 aa6.31□□□□□ -1.4
VARS-222ENST00000470953 FGF19O95750 216 aa6.31□□□□□ -1.4
VARS-222ENST00000470953 BMP15O95972 392 aa6.31□□□□□ -1.4
VARS-222ENST00000470953 F11P03951 625 aa6.31□□□□□ -1.4
VARS-222ENST00000470953 GNLYP22749 145 aa6.31□□□□□ -1.4
VARS-222ENST00000470953 CDC25CP30307 473 aa6.31□□□□□ -1.4
VARS-222ENST00000470953 TXLNAP40222 546 aa6.31□□□□□ -1.4
VARS-222ENST00000470953 RARRES1P49788 294 aa6.31□□□□□ -1.4
VARS-222ENST00000470953 FXR2P51116 673 aaKnown RBP eCLIP6.31□□□□□ -1.4
VARS-222ENST00000470953 INHBCP55103 352 aa6.31□□□□□ -1.4
VARS-222ENST00000470953 IL9RQ01113 521 aa6.31□□□□□ -1.4
VARS-222ENST00000470953 CLN3Q13286 438 aa6.31□□□□□ -1.4
VARS-222ENST00000470953 PPP2R5AQ15172 486 aa6.31□□□□□ -1.4
VARS-222ENST00000470953 ZNF77Q15935 545 aa6.31□□□□□ -1.4
VARS-222ENST00000470953 TBR1Q16650 682 aa6.31□□□□□ -1.4
VARS-222ENST00000470953 ZC2HC1CQ53FD0 456 aaPredicted RBP6.31□□□□□ -1.4
VARS-222ENST00000470953 XKR4Q5GH76 650 aa6.31□□□□□ -1.4
VARS-222ENST00000470953 PADI6Q6TGC4 694 aa6.31□□□□□ -1.4
VARS-222ENST00000470953 USP53Q70EK8 1073 aa6.31□□□□□ -1.4
VARS-222ENST00000470953 BRAPQ7Z569 592 aa6.31□□□□□ -1.4
VARS-222ENST00000470953 APBB1IPQ7Z5R6 666 aaPredicted RBP6.31□□□□□ -1.4
VARS-222ENST00000470953 C12orf40Q86WS4 652 aa6.31□□□□□ -1.4
VARS-222ENST00000470953 MIB1Q86YT6 1006 aa6.31□□□□□ -1.4
VARS-222ENST00000470953 DCBLD1Q8N8Z6 715 aa6.31□□□□□ -1.4
VARS-222ENST00000470953 SPATA3Q8NHX4 192 aa6.31□□□□□ -1.4
VARS-222ENST00000470953 LRRC15Q8TF66 581 aa6.31□□□□□ -1.4
VARS-222ENST00000470953 MARVELD3Q96A59 401 aa6.31□□□□□ -1.4
VARS-222ENST00000470953 MTMR9Q96QG7 549 aa6.31□□□□□ -1.4
VARS-222ENST00000470953 BACH2Q9BYV9 841 aa6.31□□□□□ -1.4
VARS-222ENST00000470953 UNKQ9C0B0 810 aaKnown RBP6.31□□□□□ -1.4
VARS-222ENST00000470953 C2orf40Q9H1Z8 148 aa6.31□□□□□ -1.4
VARS-222ENST00000470953 CD248Q9HCU0 757 aa6.31□□□□□ -1.4
VARS-222ENST00000470953 DDX19AQ9NUU7 478 aaKnown RBP6.31□□□□□ -1.4
VARS-222ENST00000470953 GEMIN8Q9NWZ8 242 aaKnown RBP6.31□□□□□ -1.4
VARS-222ENST00000470953 ANAPC2Q9UJX6 822 aa6.31□□□□□ -1.4
VARS-222ENST00000470953 ASB3Q9Y575 518 aa6.31□□□□□ -1.4
VARS-222ENST00000470953 NUB1Q9Y5A7 615 aa6.31□□□□□ -1.4
VARS-222ENST00000470953 PCDHB6Q9Y5E3 794 aa6.31□□□□□ -1.4
VARS-222ENST00000470953 OBSL1O75147 1896 aa6.3□□□□□ -1.4
VARS-222ENST00000470953 MYH11P35749 1972 aa6.3□□□□□ -1.4
VARS-222ENST00000470953 A0A1B0GVT2 93 aa6.3□□□□□ -1.4
VARS-222ENST00000470953 A0A1W2PQF6 199 aa6.3□□□□□ -1.4
VARS-222ENST00000470953 K7ELQ4 463 aaPredicted RBP6.3□□□□□ -1.4
VARS-222ENST00000470953 TADA3O75528 432 aa6.3□□□□□ -1.4
VARS-222ENST00000470953 PRKCGP05129 697 aa6.3□□□□□ -1.4
VARS-222ENST00000470953 KRT18P05783 430 aaKnown RBP6.3□□□□□ -1.4
VARS-222ENST00000470953 HMGA1P17096 107 aaKnown RBP6.3□□□□□ -1.4
VARS-222ENST00000470953 RPA1P27694 616 aa6.3□□□□□ -1.4
VARS-222ENST00000470953 MCM4P33991 863 aa6.3□□□□□ -1.4
Retrieved 100 of 20,778 RNA–protein pairs in 27.3 ms