RNA–Protein interactions for RNA: ENST00000470503.1

GCFC2-207, Transcript of GC-rich sequence DNA-binding factor 2, humanhuman

TSL 1 (best) BASIC

Gene GCFC2, Length 1,066 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GCFC2-207ENST00000470503 SHC4Q6S5L8 630 aa20.56■□□□□ 0.88
GCFC2-207ENST00000470503 TRMT11Q7Z4G4 463 aaKnown RBP20.56■□□□□ 0.88
GCFC2-207ENST00000470503 CCDC33Q8N5R6 958 aa20.56■□□□□ 0.88
GCFC2-207ENST00000470503 MDGA1Q8NFP4 955 aa20.56■□□□□ 0.88
GCFC2-207ENST00000470503 TMEM174Q8WUU8 243 aa20.56■□□□□ 0.88
GCFC2-207ENST00000470503 ZNF516Q92618 1163 aa20.56■□□□□ 0.88
GCFC2-207ENST00000470503 TCEAL3Q969E4 200 aa20.56■□□□□ 0.88
GCFC2-207ENST00000470503 TMEM9BQ9NQ34 198 aa20.56■□□□□ 0.88
GCFC2-207ENST00000470503 ARHGEF4Q9NR80 690 aa20.56■□□□□ 0.88
GCFC2-207ENST00000470503 FAM13BQ9NYF5 915 aa20.56■□□□□ 0.88
GCFC2-207ENST00000470503 KMT2BQ9UMN6 2715 aaPredicted RBP20.56■□□□□ 0.88
GCFC2-207ENST00000470503 LNP1A1A4G5 178 aa20.55■□□□□ 0.88
GCFC2-207ENST00000470503 FAM92AA1XBS5 289 aa20.55■□□□□ 0.88
GCFC2-207ENST00000470503 C4orf47A7E2U8 309 aa20.55■□□□□ 0.88
GCFC2-207ENST00000470503 P4HA1P13674 534 aa20.55■□□□□ 0.88
GCFC2-207ENST00000470503 CSRP1P21291 193 aaKnown RBP20.55■□□□□ 0.88
GCFC2-207ENST00000470503 CLDN10P78369 228 aa20.55■□□□□ 0.88
GCFC2-207ENST00000470503 ZNF667Q5HYK9 610 aa20.55■□□□□ 0.88
GCFC2-207ENST00000470503 BTBD8Q5XKL5 378 aa20.55■□□□□ 0.88
GCFC2-207ENST00000470503 ATL3Q6DD88 541 aa20.55■□□□□ 0.88
GCFC2-207ENST00000470503 LPCAT2Q7L5N7 544 aa20.55■□□□□ 0.88
GCFC2-207ENST00000470503 NELFCDQ8IXH7 590 aa20.55■□□□□ 0.88
GCFC2-207ENST00000470503 IL17RCQ8NAC3 791 aa20.55■□□□□ 0.88
GCFC2-207ENST00000470503 TXNDC5Q8NBS9 432 aaKnown RBP20.55■□□□□ 0.88
GCFC2-207ENST00000470503 SMARCD1Q96GM5 515 aa20.55■□□□□ 0.88
GCFC2-207ENST00000470503 TPSD1Q9BZJ3 242 aa20.55■□□□□ 0.88
GCFC2-207ENST00000470503 DPEP3Q9H4B8 488 aa20.55■□□□□ 0.88
GCFC2-207ENST00000470503 DMAP1Q9NPF5 467 aaPredicted RBP20.55■□□□□ 0.88
GCFC2-207ENST00000470503 SH3BP1Q9Y3L3 701 aa20.55■□□□□ 0.88
GCFC2-207ENST00000470503 CHD8Q9HCK8 2581 aa20.55■□□□□ 0.88
GCFC2-207ENST00000470503 TNFRSF10BO14763 440 aa20.54■□□□□ 0.88
GCFC2-207ENST00000470503 POLR2DO15514 142 aaKnown RBP20.54■□□□□ 0.88
GCFC2-207ENST00000470503 RPN1P04843 607 aaKnown RBP20.54■□□□□ 0.88
GCFC2-207ENST00000470503 TRIM21P19474 475 aaKnown RBP20.54■□□□□ 0.88
GCFC2-207ENST00000470503 P2RY2P41231 377 aa20.54■□□□□ 0.88
GCFC2-207ENST00000470503 KIR2DL1P43626 348 aaPredicted RBP20.54■□□□□ 0.88
GCFC2-207ENST00000470503 SLC6A11P48066 632 aa20.54■□□□□ 0.88
GCFC2-207ENST00000470503 NOVA1P51513 510 aaKnown RBP20.54■□□□□ 0.88
GCFC2-207ENST00000470503 CACNA2D1P54289 1103 aa20.54■□□□□ 0.88
GCFC2-207ENST00000470503 LMAN2Q12907 356 aa20.54■□□□□ 0.88
GCFC2-207ENST00000470503 BIRC3Q13489 604 aa20.54■□□□□ 0.88
GCFC2-207ENST00000470503 TMEM92Q6UXU6 159 aa20.54■□□□□ 0.88
GCFC2-207ENST00000470503 ALLCQ8N6M5 410 aa20.54■□□□□ 0.88
GCFC2-207ENST00000470503 TMEM30AQ9NV96 361 aa20.54■□□□□ 0.88
GCFC2-207ENST00000470503 MAP1BP46821 2468 aaKnown RBP20.53■□□□□ 0.88
GCFC2-207ENST00000470503 CLDN5O00501 218 aa20.53■□□□□ 0.88
GCFC2-207ENST00000470503 HOXC11O43248 304 aaPredicted RBP20.53■□□□□ 0.88
GCFC2-207ENST00000470503 MAP3K13O43283 966 aa20.53■□□□□ 0.88
GCFC2-207ENST00000470503 COCHO43405 550 aa20.53■□□□□ 0.88
GCFC2-207ENST00000470503 KLF8O95600 359 aaPredicted RBP20.53■□□□□ 0.88
GCFC2-207ENST00000470503 ZDHHC11BP0C7U3 371 aa20.53■□□□□ 0.88
GCFC2-207ENST00000470503 CEACAM1P13688 526 aa20.53■□□□□ 0.88
GCFC2-207ENST00000470503 HOXD12P35452 270 aa20.53■□□□□ 0.88
GCFC2-207ENST00000470503 TIE1P35590 1138 aa20.53■□□□□ 0.88
GCFC2-207ENST00000470503 DHPSP49366 369 aaPredicted RBP20.53■□□□□ 0.88
GCFC2-207ENST00000470503 IFRD2Q12894 506 aaPredicted RBP20.53■□□□□ 0.88
GCFC2-207ENST00000470503 ZNF699Q32M78 642 aa20.53■□□□□ 0.88
GCFC2-207ENST00000470503 LY6G5CQ5SRR4 150 aa20.53■□□□□ 0.88
GCFC2-207ENST00000470503 PSAPL1Q6NUJ1 521 aa20.53■□□□□ 0.88
GCFC2-207ENST00000470503 SLC9A9Q8IVB4 645 aa20.53■□□□□ 0.88
GCFC2-207ENST00000470503 PARD3BQ8TEW8 1205 aa20.53■□□□□ 0.88
GCFC2-207ENST00000470503 TAF4BQ92750 862 aa20.53■□□□□ 0.88
GCFC2-207ENST00000470503 MED10Q9BTT4 135 aa20.53■□□□□ 0.88
GCFC2-207ENST00000470503 GZF1Q9H116 711 aaPredicted RBP20.53■□□□□ 0.88
GCFC2-207ENST00000470503 FBXO44Q9H4M3 255 aa20.53■□□□□ 0.88
GCFC2-207ENST00000470503 SLC39A2Q9NP94 309 aa20.53■□□□□ 0.88
GCFC2-207ENST00000470503 DEC1Q9P2X7 70 aa20.53■□□□□ 0.88
GCFC2-207ENST00000470503 INVSQ9Y283 1065 aa20.53■□□□□ 0.88
GCFC2-207ENST00000470503 EML5Q05BV3 1969 aa20.52■□□□□ 0.88
GCFC2-207ENST00000470503 TBC1D3BA6NDS4 549 aa20.52■□□□□ 0.88
GCFC2-207ENST00000470503 SGK1O00141 431 aa20.52■□□□□ 0.88
GCFC2-207ENST00000470503 C4BPAP04003 597 aaKnown RBP20.52■□□□□ 0.88
GCFC2-207ENST00000470503 CHRM1P11229 460 aaPredicted RBP20.52■□□□□ 0.88
GCFC2-207ENST00000470503 BCKDHBP21953 392 aa20.52■□□□□ 0.88
GCFC2-207ENST00000470503 SLC5A3P53794 718 aa20.52■□□□□ 0.88
GCFC2-207ENST00000470503 NCOA4Q13772 614 aa20.52■□□□□ 0.88
GCFC2-207ENST00000470503 SGSM1Q2NKQ1 1148 aa20.52■□□□□ 0.88
GCFC2-207ENST00000470503 FAM35AQ86V20 835 aa20.52■□□□□ 0.88
GCFC2-207ENST00000470503 UNC93AQ86WB7 457 aa20.52■□□□□ 0.88
GCFC2-207ENST00000470503 SYT12Q8IV01 421 aa20.52■□□□□ 0.88
GCFC2-207ENST00000470503 ZFRQ96KR1 1074 aaKnown RBP20.52■□□□□ 0.88
GCFC2-207ENST00000470503 KCNK16Q96T55 309 aa20.52■□□□□ 0.88
GCFC2-207ENST00000470503 BCCIPQ9P287 314 aaKnown RBP eCLIP20.52■□□□□ 0.88
GCFC2-207ENST00000470503 CHORDC1Q9UHD1 332 aaPredicted RBP20.52■□□□□ 0.88
GCFC2-207ENST00000470503 PTPRDP23468 1912 aa20.51■□□□□ 0.87
GCFC2-207ENST00000470503 ZBTB24O43167 697 aaPredicted RBP20.51■□□□□ 0.87
GCFC2-207ENST00000470503 ZSCAN22P10073 491 aaPredicted RBP20.51■□□□□ 0.87
GCFC2-207ENST00000470503 C12orf40Q86WS4 652 aa20.51■□□□□ 0.87
GCFC2-207ENST00000470503 TTC30AQ86WT1 665 aa20.51■□□□□ 0.87
GCFC2-207ENST00000470503 ETFBKMTQ8IXQ9 262 aa20.51■□□□□ 0.87
GCFC2-207ENST00000470503 CRYBG2Q8N1P7 616 aa20.51■□□□□ 0.87
GCFC2-207ENST00000470503 PHTF2Q8N3S3 785 aa20.51■□□□□ 0.87
GCFC2-207ENST00000470503 PIGKQ92643 395 aa20.51■□□□□ 0.87
GCFC2-207ENST00000470503 NUSAP1Q9BXS6 441 aaKnown RBP20.51■□□□□ 0.87
GCFC2-207ENST00000470503 NACA2Q9H009 215 aa20.51■□□□□ 0.87
GCFC2-207ENST00000470503 SMYD3Q9H7B4 428 aa20.51■□□□□ 0.87
GCFC2-207ENST00000470503 SPHK2Q9NRA0 654 aa20.51■□□□□ 0.87
GCFC2-207ENST00000470503 DMAC2Q9NW81 257 aa20.51■□□□□ 0.87
GCFC2-207ENST00000470503 STARD13Q9Y3M8 1113 aa20.51■□□□□ 0.87
GCFC2-207ENST00000470503 HELZP42694 1942 aaKnown RBP20.51■□□□□ 0.87
Retrieved 100 of 20,778 RNA–protein pairs in 50.1 ms