RNA–Protein interactions for RNA: ENST00000470167.1

COL3A1-205, Transcript of collagen type III alpha 1 chain, humanhuman

TSL 2

Gene COL3A1, Length 628 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL3A1-205ENST00000470167 CYP3A5P20815 502 aa5.35□□□□□ -1.55
COL3A1-205ENST00000470167 ATP5F1P24539 256 aaPredicted RBP5.35□□□□□ -1.55
COL3A1-205ENST00000470167 PSMA2P25787 234 aa5.35□□□□□ -1.55
COL3A1-205ENST00000470167 ADH6P28332 368 aa5.35□□□□□ -1.55
COL3A1-205ENST00000470167 CDC25BP30305 580 aa5.35□□□□□ -1.55
COL3A1-205ENST00000470167 GDI1P31150 447 aa5.35□□□□□ -1.55
COL3A1-205ENST00000470167 CIITAP33076 1130 aa5.35□□□□□ -1.55
COL3A1-205ENST00000470167 HTR2BP41595 481 aa5.35□□□□□ -1.55
COL3A1-205ENST00000470167 HNMTP50135 292 aa5.35□□□□□ -1.55
COL3A1-205ENST00000470167 IRAK1P51617 712 aa5.35□□□□□ -1.55
COL3A1-205ENST00000470167 ALDH3A2P51648 485 aa5.35□□□□□ -1.55
COL3A1-205ENST00000470167 ZNF157P51786 506 aaPredicted RBP5.35□□□□□ -1.55
COL3A1-205ENST00000470167 AFF1P51825 1210 aaKnown RBP5.35□□□□□ -1.55
COL3A1-205ENST00000470167 KCNJ10P78508 379 aa5.35□□□□□ -1.55
COL3A1-205ENST00000470167 GCNT1Q02742 428 aa5.35□□□□□ -1.55
COL3A1-205ENST00000470167 ASPHQ12797 758 aa5.35□□□□□ -1.55
COL3A1-205ENST00000470167 STK4Q13043 487 aa5.35□□□□□ -1.55
COL3A1-205ENST00000470167 PIN1Q13526 163 aaPredicted RBP5.35□□□□□ -1.55
COL3A1-205ENST00000470167 PDE3AQ14432 1141 aa5.35□□□□□ -1.55
COL3A1-205ENST00000470167 KCNAB1Q14722 419 aa5.35□□□□□ -1.55
COL3A1-205ENST00000470167 NCAPHQ15003 741 aa5.35□□□□□ -1.55
COL3A1-205ENST00000470167 NPTX1Q15818 432 aa5.35□□□□□ -1.55
COL3A1-205ENST00000470167 SGCAQ16586 387 aa5.35□□□□□ -1.55
COL3A1-205ENST00000470167 UGP2Q16851 508 aa5.35□□□□□ -1.55
COL3A1-205ENST00000470167 PARP6Q2NL67 630 aa5.35□□□□□ -1.55
COL3A1-205ENST00000470167 FAM76BQ5HYJ3 339 aa5.35□□□□□ -1.55
COL3A1-205ENST00000470167 MDH1BQ5I0G3 518 aa5.35□□□□□ -1.55
COL3A1-205ENST00000470167 PERM1Q5SV97 790 aa5.35□□□□□ -1.55
COL3A1-205ENST00000470167 DUPD1Q68J44 220 aa5.35□□□□□ -1.55
COL3A1-205ENST00000470167 ANO7Q6IWH7 933 aa5.35□□□□□ -1.55
COL3A1-205ENST00000470167 ELMSAN1Q6PJG2 1045 aa5.35□□□□□ -1.55
COL3A1-205ENST00000470167 KDM7AQ6ZMT4 941 aa5.35□□□□□ -1.55
COL3A1-205ENST00000470167 SV2BQ7L1I2 683 aa5.35□□□□□ -1.55
COL3A1-205ENST00000470167 RHPN2Q8IUC4 686 aa5.35□□□□□ -1.55
COL3A1-205ENST00000470167 TICAM1Q8IUC6 712 aa5.35□□□□□ -1.55
COL3A1-205ENST00000470167 PASD1Q8IV76 773 aa5.35□□□□□ -1.55
COL3A1-205ENST00000470167 CROCCP3Q8IVE0 287 aa5.35□□□□□ -1.55
COL3A1-205ENST00000470167 NOSTRINQ8IVI9 506 aa5.35□□□□□ -1.55
COL3A1-205ENST00000470167 CCDC36Q8IYA8 594 aa5.35□□□□□ -1.55
COL3A1-205ENST00000470167 LINC00518Q8N0U6 118 aa5.35□□□□□ -1.55
COL3A1-205ENST00000470167 PPM1NQ8N819 430 aa5.35□□□□□ -1.55
COL3A1-205ENST00000470167 ANKS4BQ8N8V4 417 aa5.35□□□□□ -1.55
COL3A1-205ENST00000470167 FAM71DQ8N9W8 422 aa5.35□□□□□ -1.55
COL3A1-205ENST00000470167 FAM216AQ8WUB2 273 aa5.35□□□□□ -1.55
COL3A1-205ENST00000470167 CPLX3Q8WVH0 158 aa5.35□□□□□ -1.55
COL3A1-205ENST00000470167 SLC44A1Q8WWI5 657 aa5.35□□□□□ -1.55
COL3A1-205ENST00000470167 HDAC2Q92769 488 aaKnown RBP5.35□□□□□ -1.55
COL3A1-205ENST00000470167 ZNF775Q96BV0 537 aaPredicted RBP5.35□□□□□ -1.55
COL3A1-205ENST00000470167 HES6Q96HZ4 224 aa5.35□□□□□ -1.55
COL3A1-205ENST00000470167 ZDHHC15Q96MV8 337 aa5.35□□□□□ -1.55
COL3A1-205ENST00000470167 OLFM3Q96PB7 478 aa5.35□□□□□ -1.55
COL3A1-205ENST00000470167 VPS35Q96QK1 796 aa5.35□□□□□ -1.55
COL3A1-205ENST00000470167 CAMKK2Q96RR4 588 aa5.35□□□□□ -1.55
COL3A1-205ENST00000470167 PIGSQ96S52 555 aa5.35□□□□□ -1.55
COL3A1-205ENST00000470167 TM9SF2Q99805 663 aa5.35□□□□□ -1.55
COL3A1-205ENST00000470167 CDK19Q9BWU1 502 aa5.35□□□□□ -1.55
COL3A1-205ENST00000470167 PINK1Q9BXM7 581 aa5.35□□□□□ -1.55
COL3A1-205ENST00000470167 EMILIN2Q9BXX0 1053 aa5.35□□□□□ -1.55
COL3A1-205ENST00000470167 WDR12Q9GZL7 423 aaKnown RBP5.35□□□□□ -1.55
COL3A1-205ENST00000470167 C6orf62Q9GZU0 229 aaPredicted RBP5.35□□□□□ -1.55
COL3A1-205ENST00000470167 LSG1Q9H089 658 aaKnown RBP5.35□□□□□ -1.55
COL3A1-205ENST00000470167 KLHL25Q9H0H3 589 aa5.35□□□□□ -1.55
COL3A1-205ENST00000470167 SMG9Q9H0W8 520 aaKnown RBP5.35□□□□□ -1.55
COL3A1-205ENST00000470167 OR51B5Q9H339 312 aa5.35□□□□□ -1.55
COL3A1-205ENST00000470167 SLITRK6Q9H5Y7 841 aa5.35□□□□□ -1.55
COL3A1-205ENST00000470167 FAM204AQ9H8W3 233 aa5.35□□□□□ -1.55
COL3A1-205ENST00000470167 SP140LQ9H930 580 aa5.35□□□□□ -1.55
COL3A1-205ENST00000470167 KCNK13Q9HB14 408 aa5.35□□□□□ -1.55
COL3A1-205ENST00000470167 MRPL40Q9NQ50 206 aaKnown RBP5.35□□□□□ -1.55
COL3A1-205ENST00000470167 SEC31BQ9NQW1 1179 aa5.35□□□□□ -1.55
COL3A1-205ENST00000470167 CYP26B1Q9NR63 512 aa5.35□□□□□ -1.55
COL3A1-205ENST00000470167 PLSCR4Q9NRQ2 329 aa5.35□□□□□ -1.55
COL3A1-205ENST00000470167 C1orf112Q9NSG2 853 aa5.35□□□□□ -1.55
COL3A1-205ENST00000470167 GDAP2Q9NXN4 497 aa5.35□□□□□ -1.55
COL3A1-205ENST00000470167 DACT1Q9NYF0 836 aa5.35□□□□□ -1.55
COL3A1-205ENST00000470167 HMG20BQ9P0W2 317 aa5.35□□□□□ -1.55
COL3A1-205ENST00000470167 BTBD7Q9P203 1132 aa5.35□□□□□ -1.55
COL3A1-205ENST00000470167 NXF1Q9UBU9 619 aaKnown RBP5.35□□□□□ -1.55
COL3A1-205ENST00000470167 ADAMTS1Q9UHI8 967 aa5.35□□□□□ -1.55
COL3A1-205ENST00000470167 MBD1Q9UIS9 605 aaPredicted RBP5.35□□□□□ -1.55
COL3A1-205ENST00000470167 VAV3Q9UKW4 847 aa5.35□□□□□ -1.55
COL3A1-205ENST00000470167 RAB21Q9UL25 225 aa5.35□□□□□ -1.55
COL3A1-205ENST00000470167 PSME2Q9UL46 239 aa5.35□□□□□ -1.55
COL3A1-205ENST00000470167 C19orf53Q9UNZ5 99 aaPredicted RBP5.35□□□□□ -1.55
COL3A1-205ENST00000470167 TLR6Q9Y2C9 796 aa5.35□□□□□ -1.55
COL3A1-205ENST00000470167 GPR52Q9Y2T5 361 aa5.35□□□□□ -1.55
COL3A1-205ENST00000470167 HBS1LQ9Y450 684 aaKnown RBP5.35□□□□□ -1.55
COL3A1-205ENST00000470167 SPEF1Q9Y4P9 236 aa5.35□□□□□ -1.55
COL3A1-205ENST00000470167 PIAS3Q9Y6X2 628 aa5.35□□□□□ -1.55
COL3A1-205ENST00000470167 PMF1-BGLAPU3KQ54 211 aa5.35□□□□□ -1.55
COL3A1-205ENST00000470167 CDHR2Q9BYE9 1310 aa5.34□□□□□ -1.55
COL3A1-205ENST00000470167 A0A1B0GTQ1 180 aa5.34□□□□□ -1.55
COL3A1-205ENST00000470167 LOC390937A0A1W2PQ73 354 aa5.34□□□□□ -1.55
COL3A1-205ENST00000470167 PMS2P1A4D2B8 440 aa5.34□□□□□ -1.55
COL3A1-205ENST00000470167 CAPN8A6NHC0 703 aa5.34□□□□□ -1.55
COL3A1-205ENST00000470167 ZSCAN5BA6NJL1 495 aa5.34□□□□□ -1.55
COL3A1-205ENST00000470167 MINDY4BA8MYZ0 360 aa5.34□□□□□ -1.55
COL3A1-205ENST00000470167 HSBP1L1C9JCN9 74 aa5.34□□□□□ -1.55
COL3A1-205ENST00000470167 K7EPI3 171 aa5.34□□□□□ -1.55
COL3A1-205ENST00000470167 EYA2O00167 538 aa5.34□□□□□ -1.55
Retrieved 100 of 20,778 RNA–protein pairs in 19.5 ms