RNA–Protein interactions for RNA: ENST00000470068.2

CCDC144A-212, Transcript of coiled-coil domain containing 144A, humanhuman

TSL 1 (best)

Gene CCDC144A, Length 5,142 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC144A-212ENST00000470068 ZSCAN5CA6NGD5 496 aaPredicted RBP6.35□□□□□ -1.39
CCDC144A-212ENST00000470068 SOWAHDA6NJG2 315 aa6.35□□□□□ -1.39
CCDC144A-212ENST00000470068 VWA5AO00534 786 aa6.35□□□□□ -1.39
CCDC144A-212ENST00000470068 GPR182O15218 404 aa6.35□□□□□ -1.39
CCDC144A-212ENST00000470068 OGTO15294 1046 aa6.35□□□□□ -1.39
CCDC144A-212ENST00000470068 UCHL3P15374 230 aa6.35□□□□□ -1.39
CCDC144A-212ENST00000470068 MCAMP43121 646 aa6.35□□□□□ -1.39
CCDC144A-212ENST00000470068 PLA2G4AP47712 749 aa6.35□□□□□ -1.39
CCDC144A-212ENST00000470068 SLC11A2P49281 568 aa6.35□□□□□ -1.39
CCDC144A-212ENST00000470068 PTPN5P54829 565 aa6.35□□□□□ -1.39
CCDC144A-212ENST00000470068 MAGOHP61326 146 aaKnown RBP6.35□□□□□ -1.39
CCDC144A-212ENST00000470068 PDIA2Q13087 525 aaKnown RBP6.35□□□□□ -1.39
CCDC144A-212ENST00000470068 PRKAA1Q13131 559 aa6.35□□□□□ -1.39
CCDC144A-212ENST00000470068 BTG3Q14201 252 aaPredicted RBP6.35□□□□□ -1.39
CCDC144A-212ENST00000470068 TCEA2Q15560 299 aa6.35□□□□□ -1.39
CCDC144A-212ENST00000470068 TAF2Q6P1X5 1199 aa6.35□□□□□ -1.39
CCDC144A-212ENST00000470068 RFX8Q6ZV50 586 aa6.35□□□□□ -1.39
CCDC144A-212ENST00000470068 Q7L0L9 218 aa6.35□□□□□ -1.39
CCDC144A-212ENST00000470068 ATPAF2Q8N5M1 289 aa6.35□□□□□ -1.39
CCDC144A-212ENST00000470068 FBXO22Q8NEZ5 403 aa6.35□□□□□ -1.39
CCDC144A-212ENST00000470068 SLC7A14Q8TBB6 771 aa6.35□□□□□ -1.39
CCDC144A-212ENST00000470068 SDR42E1Q8WUS8 393 aa6.35□□□□□ -1.39
CCDC144A-212ENST00000470068 PTCD2Q8WV60 388 aaKnown RBP6.35□□□□□ -1.39
CCDC144A-212ENST00000470068 USP6NLQ92738 828 aa6.35□□□□□ -1.39
CCDC144A-212ENST00000470068 N4BP2L2Q92802 583 aaPredicted RBP6.35□□□□□ -1.39
CCDC144A-212ENST00000470068 RPRD1AQ96P16 312 aaPredicted RBP6.35□□□□□ -1.39
CCDC144A-212ENST00000470068 CGRRF1Q99675 332 aa6.35□□□□□ -1.39
CCDC144A-212ENST00000470068 GPAMQ9HCL2 828 aa6.35□□□□□ -1.39
CCDC144A-212ENST00000470068 ARHGEF38Q9NXL2 777 aa6.35□□□□□ -1.39
CCDC144A-212ENST00000470068 H2AFY2Q9P0M6 372 aaPredicted RBP6.35□□□□□ -1.39
CCDC144A-212ENST00000470068 FETUBQ9UGM5 382 aa6.35□□□□□ -1.39
CCDC144A-212ENST00000470068 MAD2L2Q9UI95 211 aa6.35□□□□□ -1.39
CCDC144A-212ENST00000470068 PTPN22Q9Y2R2 807 aa6.35□□□□□ -1.39
CCDC144A-212ENST00000470068 ZNF541Q9H0D2 1346 aa6.35□□□□□ -1.39
CCDC144A-212ENST00000470068 E9PCH4 1651 aa6.35□□□□□ -1.39
CCDC144A-212ENST00000470068 A0A087X1B8 175 aa6.35□□□□□ -1.39
CCDC144A-212ENST00000470068 TTC26A0AVF1 554 aa6.35□□□□□ -1.39
CCDC144A-212ENST00000470068 PALM2-AKAP2B1ALY0 433 aaPredicted RBP6.35□□□□□ -1.39
CCDC144A-212ENST00000470068 F5H6K3 240 aa6.35□□□□□ -1.39
CCDC144A-212ENST00000470068 RRM2P31350 389 aa6.35□□□□□ -1.39
CCDC144A-212ENST00000470068 SREBF1P36956 1147 aa6.35□□□□□ -1.39
CCDC144A-212ENST00000470068 GRIK1P39086 918 aa6.35□□□□□ -1.39
CCDC144A-212ENST00000470068 STAT5AP42229 794 aa6.35□□□□□ -1.39
CCDC144A-212ENST00000470068 CAPZA2P47755 286 aa6.35□□□□□ -1.39
CCDC144A-212ENST00000470068 ARPP19P56211 112 aa6.35□□□□□ -1.39
CCDC144A-212ENST00000470068 CSNK2BP67870 215 aa6.35□□□□□ -1.39
CCDC144A-212ENST00000470068 KLRC3Q07444 240 aa6.35□□□□□ -1.39
CCDC144A-212ENST00000470068 CNGA3Q16281 694 aa6.35□□□□□ -1.39
CCDC144A-212ENST00000470068 TMEM44Q2T9K0 475 aa6.35□□□□□ -1.39
CCDC144A-212ENST00000470068 SPDYAQ5MJ70 313 aa6.35□□□□□ -1.39
CCDC144A-212ENST00000470068 ARCQ7LC44 396 aa6.35□□□□□ -1.39
CCDC144A-212ENST00000470068 HERC6Q8IVU3 1022 aa6.35□□□□□ -1.39
CCDC144A-212ENST00000470068 C12orf56Q8IXR9 622 aa6.35□□□□□ -1.39
CCDC144A-212ENST00000470068 MAML1Q92585 1016 aa6.35□□□□□ -1.39
CCDC144A-212ENST00000470068 EZH1Q92800 747 aaPredicted RBP6.35□□□□□ -1.39
CCDC144A-212ENST00000470068 AKT1S1Q96B36 256 aa6.35□□□□□ -1.39
CCDC144A-212ENST00000470068 LXNQ9BS40 222 aa6.35□□□□□ -1.39
CCDC144A-212ENST00000470068 MYL10Q9BUA6 226 aa6.35□□□□□ -1.39
CCDC144A-212ENST00000470068 SPATA5L1Q9BVQ7 753 aa6.35□□□□□ -1.39
CCDC144A-212ENST00000470068 PUS7LQ9H0K6 701 aaKnown RBP6.35□□□□□ -1.39
CCDC144A-212ENST00000470068 TMEM134Q9H6X4 195 aa6.35□□□□□ -1.39
CCDC144A-212ENST00000470068 ETNK1Q9HBU6 452 aa6.35□□□□□ -1.39
CCDC144A-212ENST00000470068 VPS51Q9UID3 782 aa6.35□□□□□ -1.39
CCDC144A-212ENST00000470068 HPSEQ9Y251 543 aa6.35□□□□□ -1.39
CCDC144A-212ENST00000470068 MRPS17Q9Y2R5 130 aaKnown RBP6.35□□□□□ -1.39
CCDC144A-212ENST00000470068 IPPQ9Y573 584 aa6.35□□□□□ -1.39
CCDC144A-212ENST00000470068 FRMPD2Q68DX3 1309 aaPredicted RBP6.35□□□□□ -1.39
CCDC144A-212ENST00000470068 ROBO3Q96MS0 1386 aa6.35□□□□□ -1.39
CCDC144A-212ENST00000470068 TMEM114B3SHH9 223 aa6.34□□□□□ -1.39
CCDC144A-212ENST00000470068 CPA1P15085 419 aa6.34□□□□□ -1.39
CCDC144A-212ENST00000470068 MSH3P20585 1137 aa6.34□□□□□ -1.39
CCDC144A-212ENST00000470068 VCPP55072 806 aaKnown RBP6.34□□□□□ -1.39
CCDC144A-212ENST00000470068 C2orf54Q08AI8 447 aa6.34□□□□□ -1.39
CCDC144A-212ENST00000470068 MEA1Q16626 185 aa6.34□□□□□ -1.39
CCDC144A-212ENST00000470068 QRICH1Q2TAL8 776 aa6.34□□□□□ -1.39
CCDC144A-212ENST00000470068 ADCK5Q3MIX3 580 aa6.34□□□□□ -1.39
CCDC144A-212ENST00000470068 INTS6LQ5JSJ4 861 aaKnown RBP6.34□□□□□ -1.39
CCDC144A-212ENST00000470068 KLHDC7AQ5VTJ3 777 aa6.34□□□□□ -1.39
CCDC144A-212ENST00000470068 IFNL1Q8IU54 200 aa6.34□□□□□ -1.39
CCDC144A-212ENST00000470068 ZNF473Q8WTR7 871 aaKnown RBP6.34□□□□□ -1.39
CCDC144A-212ENST00000470068 AFG1LQ8WV93 481 aa6.34□□□□□ -1.39
CCDC144A-212ENST00000470068 ASIC4Q96FT7 647 aa6.34□□□□□ -1.39
CCDC144A-212ENST00000470068 ZSWIM1Q9BR11 485 aa6.34□□□□□ -1.39
CCDC144A-212ENST00000470068 FBXO44Q9H4M3 255 aa6.34□□□□□ -1.39
CCDC144A-212ENST00000470068 DHX33Q9H6R0 707 aaKnown RBP6.34□□□□□ -1.39
CCDC144A-212ENST00000470068 NRDE2Q9H7Z3 1164 aa6.34□□□□□ -1.39
CCDC144A-212ENST00000470068 HSPBP1Q9NZL4 362 aa6.34□□□□□ -1.39
CCDC144A-212ENST00000470068 ZNF510Q9Y2H8 683 aa6.34□□□□□ -1.39
CCDC144A-212ENST00000470068 FAM205AQ6ZU69 1335 aa6.34□□□□□ -1.39
CCDC144A-212ENST00000470068 SDR42E2A6NKP2 422 aa6.34□□□□□ -1.39
CCDC144A-212ENST00000470068 C2orf81A6NN90 581 aa6.34□□□□□ -1.39
CCDC144A-212ENST00000470068 M0QYV0 167 aa6.34□□□□□ -1.39
CCDC144A-212ENST00000470068 CXCL11O14625 94 aa6.34□□□□□ -1.39
CCDC144A-212ENST00000470068 FGF10O15520 208 aaPredicted RBP6.34□□□□□ -1.39
CCDC144A-212ENST00000470068 CYP27B1O15528 508 aa6.34□□□□□ -1.39
CCDC144A-212ENST00000470068 VPS26AO75436 327 aa6.34□□□□□ -1.39
CCDC144A-212ENST00000470068 RTN3O95197 1032 aaPredicted RBP6.34□□□□□ -1.39
CCDC144A-212ENST00000470068 ERCC2P18074 760 aa6.34□□□□□ -1.39
CCDC144A-212ENST00000470068 YWHABP31946 246 aaKnown RBP6.34□□□□□ -1.39
CCDC144A-212ENST00000470068 NUP62P37198 522 aaPredicted RBP6.34□□□□□ -1.39
Retrieved 100 of 20,778 RNA–protein pairs in 36.7 ms