RNA–Protein interactions for RNA: ENST00000469163.1

NUP50-214, Transcript of nucleoporin 50, humanhuman

TSL 2

Gene NUP50, Length 3,507 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP50-214ENST00000469163 PAN2Q504Q3 1202 aaKnown RBP10.34□□□□□ -0.75
NUP50-214ENST00000469163 IGSF11Q5DX21 431 aa10.34□□□□□ -0.75
NUP50-214ENST00000469163 RNF19BQ6ZMZ0 732 aa10.34□□□□□ -0.75
NUP50-214ENST00000469163 PLEKHH3Q7Z736 793 aa10.34□□□□□ -0.75
NUP50-214ENST00000469163 C12orf50Q8NA57 414 aaPredicted RBP10.34□□□□□ -0.75
NUP50-214ENST00000469163 PLEKHO2Q8TD55 490 aa10.34□□□□□ -0.75
NUP50-214ENST00000469163 MED15Q96RN5 788 aa10.34□□□□□ -0.75
NUP50-214ENST00000469163 USP29Q9HBJ7 922 aa10.34□□□□□ -0.75
NUP50-214ENST00000469163 NRBP2Q9NSY0 501 aa10.34□□□□□ -0.75
NUP50-214ENST00000469163 SLC30A1Q9Y6M5 507 aa10.34□□□□□ -0.75
NUP50-214ENST00000469163 SDK1Q7Z5N4 2213 aa10.34□□□□□ -0.75
NUP50-214ENST00000469163 SOCS7O14512 581 aa10.34□□□□□ -0.75
NUP50-214ENST00000469163 ZNF862O60290 1169 aa10.34□□□□□ -0.75
NUP50-214ENST00000469163 RNASEH1O60930 286 aaKnown RBP10.34□□□□□ -0.75
NUP50-214ENST00000469163 TBX10O75333 385 aa10.34□□□□□ -0.75
NUP50-214ENST00000469163 EYA4O95677 639 aa10.34□□□□□ -0.75
NUP50-214ENST00000469163 ATP6V1B1P15313 513 aa10.34□□□□□ -0.75
NUP50-214ENST00000469163 CLK2P49760 499 aaKnown RBP10.34□□□□□ -0.75
NUP50-214ENST00000469163 FLT3LGP49771 235 aa10.34□□□□□ -0.75
NUP50-214ENST00000469163 RARRES1P49788 294 aa10.34□□□□□ -0.75
NUP50-214ENST00000469163 DSG1Q02413 1049 aa10.34□□□□□ -0.75
NUP50-214ENST00000469163 SPA17Q15506 151 aa10.34□□□□□ -0.75
NUP50-214ENST00000469163 CFAP221Q4G0U5 840 aa10.34□□□□□ -0.75
NUP50-214ENST00000469163 CEP78Q5JTW2 689 aa10.34□□□□□ -0.75
NUP50-214ENST00000469163 EFCAB12Q6NXP0 572 aa10.34□□□□□ -0.75
NUP50-214ENST00000469163 C4orf22Q6V702 233 aa10.34□□□□□ -0.75
NUP50-214ENST00000469163 KBTBD2Q8IY47 623 aa10.34□□□□□ -0.75
NUP50-214ENST00000469163 TRPC4APQ8TEL6 797 aa10.34□□□□□ -0.75
NUP50-214ENST00000469163 ZC3H15Q8WU90 426 aaKnown RBP10.34□□□□□ -0.75
NUP50-214ENST00000469163 SCFD1Q8WVM8 642 aa10.34□□□□□ -0.75
NUP50-214ENST00000469163 SGCDQ92629 289 aa10.34□□□□□ -0.75
NUP50-214ENST00000469163 MARCH7Q9H992 704 aa10.34□□□□□ -0.75
NUP50-214ENST00000469163 TBC1D23Q9NUY8 699 aa10.34□□□□□ -0.75
NUP50-214ENST00000469163 UCKL1Q9NWZ5 548 aa10.34□□□□□ -0.75
NUP50-214ENST00000469163 KLHL42Q9P2K6 505 aa10.34□□□□□ -0.75
NUP50-214ENST00000469163 PRKAG3Q9UGI9 489 aa10.34□□□□□ -0.75
NUP50-214ENST00000469163 HMGXB4Q9UGU5 601 aa10.34□□□□□ -0.75
NUP50-214ENST00000469163 TTC26A0AVF1 554 aa10.34□□□□□ -0.75
NUP50-214ENST00000469163 COL6A1P12109 1028 aa10.34□□□□□ -0.75
NUP50-214ENST00000469163 PRLRP16471 622 aa10.34□□□□□ -0.75
NUP50-214ENST00000469163 CYLC1P35663 651 aaPredicted RBP10.34□□□□□ -0.75
NUP50-214ENST00000469163 TNFAIP2Q03169 654 aa10.34□□□□□ -0.75
NUP50-214ENST00000469163 UAP1Q16222 522 aaPredicted RBP10.34□□□□□ -0.75
NUP50-214ENST00000469163 LRRC36Q1X8D7 754 aa10.34□□□□□ -0.75
NUP50-214ENST00000469163 SYCP2LQ5T4T6 812 aa10.34□□□□□ -0.75
NUP50-214ENST00000469163 PASD1Q8IV76 773 aa10.34□□□□□ -0.75
NUP50-214ENST00000469163 PPP1R14CQ8TAE6 165 aa10.34□□□□□ -0.75
NUP50-214ENST00000469163 SEPT1Q8WYJ6 367 aa10.34□□□□□ -0.75
NUP50-214ENST00000469163 ITPKCQ96DU7 683 aa10.34□□□□□ -0.75
NUP50-214ENST00000469163 ASIC4Q96FT7 647 aa10.34□□□□□ -0.75
NUP50-214ENST00000469163 NEURL2Q9BR09 285 aa10.34□□□□□ -0.75
NUP50-214ENST00000469163 RNPEPQ9H4A4 650 aa10.34□□□□□ -0.75
NUP50-214ENST00000469163 ZFYVE28Q9HCC9 887 aa10.34□□□□□ -0.75
NUP50-214ENST00000469163 UBN1Q9NPG3 1134 aa10.34□□□□□ -0.75
NUP50-214ENST00000469163 CEP72Q9P209 647 aa10.34□□□□□ -0.75
NUP50-214ENST00000469163 PPP2R3BQ9Y5P8 575 aa10.34□□□□□ -0.75
NUP50-214ENST00000469163 SNX9Q9Y5X1 595 aa10.34□□□□□ -0.75
NUP50-214ENST00000469163 SNTNA6NMZ2 147 aa10.33□□□□□ -0.76
NUP50-214ENST00000469163 PFDN6O15212 129 aa10.33□□□□□ -0.76
NUP50-214ENST00000469163 KMOO15229 486 aa10.33□□□□□ -0.76
NUP50-214ENST00000469163 FARP2O94887 1054 aaPredicted RBP10.33□□□□□ -0.76
NUP50-214ENST00000469163 CAPN1P07384 714 aa10.33□□□□□ -0.76
NUP50-214ENST00000469163 CD19P15391 556 aa10.33□□□□□ -0.76
NUP50-214ENST00000469163 RRM1P23921 792 aa10.33□□□□□ -0.76
NUP50-214ENST00000469163 DNM2P50570 870 aa10.33□□□□□ -0.76
NUP50-214ENST00000469163 NLRP11P59045 1033 aaKnown RBP10.33□□□□□ -0.76
NUP50-214ENST00000469163 AP1B1Q10567 949 aa10.33□□□□□ -0.76
NUP50-214ENST00000469163 AMHR2Q16671 573 aa10.33□□□□□ -0.76
NUP50-214ENST00000469163 USP43Q70EL4 1123 aa10.33□□□□□ -0.76
NUP50-214ENST00000469163 CBWD2Q8IUF1 395 aa10.33□□□□□ -0.76
NUP50-214ENST00000469163 KLHL25Q9H0H3 589 aa10.33□□□□□ -0.76
NUP50-214ENST00000469163 GOLPH3Q9H4A6 298 aa10.33□□□□□ -0.76
NUP50-214ENST00000469163 TMEM206Q9H813 350 aa10.33□□□□□ -0.76
NUP50-214ENST00000469163 GCNT4Q9P109 453 aa10.33□□□□□ -0.76
NUP50-214ENST00000469163 PARP2Q9UGN5 583 aa10.33□□□□□ -0.76
NUP50-214ENST00000469163 RWDD2AQ9UIY3 292 aa10.33□□□□□ -0.76
NUP50-214ENST00000469163 HEMK1Q9Y5R4 338 aaPredicted RBP10.33□□□□□ -0.76
NUP50-214ENST00000469163 QSER1Q2KHR3 1735 aa10.33□□□□□ -0.76
NUP50-214ENST00000469163 A0A0G2JLL6 359 aaPredicted RBP10.33□□□□□ -0.76
NUP50-214ENST00000469163 RCCD1A6NED2 376 aa10.33□□□□□ -0.76
NUP50-214ENST00000469163 A8MU76 341 aa10.33□□□□□ -0.76
NUP50-214ENST00000469163 CALUO43852 315 aaPredicted RBP10.33□□□□□ -0.76
NUP50-214ENST00000469163 TRMUO75648 421 aaKnown RBP10.33□□□□□ -0.76
NUP50-214ENST00000469163 MOCS3O95396 460 aa10.33□□□□□ -0.76
NUP50-214ENST00000469163 PCSK6P29122 969 aa10.33□□□□□ -0.76
NUP50-214ENST00000469163 GRIA2P42262 883 aa10.33□□□□□ -0.76
NUP50-214ENST00000469163 MLLT3P42568 568 aaPredicted RBP10.33□□□□□ -0.76
NUP50-214ENST00000469163 STT3AP46977 705 aa10.33□□□□□ -0.76
NUP50-214ENST00000469163 ENTPD1P49961 510 aa10.33□□□□□ -0.76
NUP50-214ENST00000469163 KCNH2Q12809 1159 aa10.33□□□□□ -0.76
NUP50-214ENST00000469163 MED21Q13503 144 aa10.33□□□□□ -0.76
NUP50-214ENST00000469163 KCNJ8Q15842 424 aa10.33□□□□□ -0.76
NUP50-214ENST00000469163 KNOP1Q1ED39 458 aaKnown RBP10.33□□□□□ -0.76
NUP50-214ENST00000469163 PRRT2Q7Z6L0 340 aaPredicted RBP10.33□□□□□ -0.76
NUP50-214ENST00000469163 C11orf96Q7Z7L8 435 aa10.33□□□□□ -0.76
NUP50-214ENST00000469163 RHOT2Q8IXI1 618 aa10.33□□□□□ -0.76
NUP50-214ENST00000469163 CAPNS2Q96L46 248 aa10.33□□□□□ -0.76
NUP50-214ENST00000469163 ADAMTS1Q9UHI8 967 aa10.33□□□□□ -0.76
NUP50-214ENST00000469163 VAV3Q9UKW4 847 aa10.33□□□□□ -0.76
NUP50-214ENST00000469163 RGS16O15492 202 aaPredicted RBP10.33□□□□□ -0.76
Retrieved 100 of 20,778 RNA–protein pairs in 71.1 ms