RNA–Protein interactions for RNA: ENST00000467733.1

SSR3-204, Transcript of signal sequence receptor subunit 3, humanhuman

TSL 2

Gene SSR3, Length 873 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSR3-204ENST00000467733 FSD2A1L4K1 749 aa4.81□□□□□ -1.64
SSR3-204ENST00000467733 PTPDC1A2A3K4 754 aa4.81□□□□□ -1.64
SSR3-204ENST00000467733 TMEM191CA6NGB0 347 aa4.81□□□□□ -1.64
SSR3-204ENST00000467733 CAPN14A8MX76 684 aa4.81□□□□□ -1.64
SSR3-204ENST00000467733 RSPH10B2B2RC85 870 aa4.81□□□□□ -1.64
SSR3-204ENST00000467733 HAS3O00219 553 aa4.81□□□□□ -1.64
SSR3-204ENST00000467733 CDC45O75419 566 aa4.81□□□□□ -1.64
SSR3-204ENST00000467733 BCAR3O75815 825 aa4.81□□□□□ -1.64
SSR3-204ENST00000467733 CSPG5O95196 566 aa4.81□□□□□ -1.64
SSR3-204ENST00000467733 GH1P01241 217 aa4.81□□□□□ -1.64
SSR3-204ENST00000467733 RSPH10BP0C881 870 aa4.81□□□□□ -1.64
SSR3-204ENST00000467733 TRIM27P14373 513 aa4.81□□□□□ -1.64
SSR3-204ENST00000467733 PTPN1P18031 435 aaKnown RBP4.81□□□□□ -1.64
SSR3-204ENST00000467733 CASTP20810 708 aaKnown RBP4.81□□□□□ -1.64
SSR3-204ENST00000467733 IGFALSP35858 605 aa4.81□□□□□ -1.64
SSR3-204ENST00000467733 SLC1A4P43007 532 aa4.81□□□□□ -1.64
SSR3-204ENST00000467733 IL13RA1P78552 427 aa4.81□□□□□ -1.64
SSR3-204ENST00000467733 ATP8B2P98198 1209 aa4.81□□□□□ -1.64
SSR3-204ENST00000467733 CAMK1Q14012 370 aa4.81□□□□□ -1.64
SSR3-204ENST00000467733 DGKDQ16760 1214 aa4.81□□□□□ -1.64
SSR3-204ENST00000467733 SBK1Q52WX2 424 aa4.81□□□□□ -1.64
SSR3-204ENST00000467733 CCDC62Q6P9F0 684 aa4.81□□□□□ -1.64
SSR3-204ENST00000467733 ADGRD2Q7Z7M1 963 aa4.81□□□□□ -1.64
SSR3-204ENST00000467733 SERINC5Q86VE9 423 aa4.81□□□□□ -1.64
SSR3-204ENST00000467733 PTRH1Q86Y79 214 aaKnown RBP4.81□□□□□ -1.64
SSR3-204ENST00000467733 D2HGDHQ8N465 521 aa4.81□□□□□ -1.64
SSR3-204ENST00000467733 APBB2Q92870 758 aa4.81□□□□□ -1.64
SSR3-204ENST00000467733 P2RX5Q93086 422 aa4.81□□□□□ -1.64
SSR3-204ENST00000467733 IL17RAQ96F46 866 aa4.81□□□□□ -1.64
SSR3-204ENST00000467733 DDX24Q9GZR7 859 aaKnown RBP eCLIP4.81□□□□□ -1.64
SSR3-204ENST00000467733 TRIM39Q9HCM9 518 aa4.81□□□□□ -1.64
SSR3-204ENST00000467733 DLL3Q9NYJ7 618 aa4.81□□□□□ -1.64
SSR3-204ENST00000467733 CBLCQ9ULV8 474 aa4.81□□□□□ -1.64
SSR3-204ENST00000467733 BARX2Q9UMQ3 279 aaPredicted RBP4.81□□□□□ -1.64
SSR3-204ENST00000467733 SLC4A4Q9Y6R1 1079 aa4.81□□□□□ -1.64
SSR3-204ENST00000467733 GCN1Q92616 2671 aaKnown RBP4.81□□□□□ -1.64
SSR3-204ENST00000467733 MAST4O15021 2626 aa4.8□□□□□ -1.64
SSR3-204ENST00000467733 DSPP15924 2871 aaKnown RBP4.8□□□□□ -1.64
SSR3-204ENST00000467733 MIA3Q5JRA6 1907 aa4.8□□□□□ -1.64
SSR3-204ENST00000467733 B4DLN1 442 aa4.8□□□□□ -1.64
SSR3-204ENST00000467733 ZNF561-AS1K7EIQ3 104 aa4.8□□□□□ -1.64
SSR3-204ENST00000467733 PPP1R12AO14974 1030 aaPredicted RBP4.8□□□□□ -1.64
SSR3-204ENST00000467733 SLC26A4O43511 780 aa4.8□□□□□ -1.64
SSR3-204ENST00000467733 OPA1O60313 960 aa4.8□□□□□ -1.64
SSR3-204ENST00000467733 CAND2O75155 1236 aa4.8□□□□□ -1.64
SSR3-204ENST00000467733 LMNAP02545 664 aaKnown RBP4.8□□□□□ -1.64
SSR3-204ENST00000467733 ASLP04424 464 aa4.8□□□□□ -1.64
SSR3-204ENST00000467733 ITGB1P05556 798 aa4.8□□□□□ -1.64
SSR3-204ENST00000467733 ZNF286BP0CG31 522 aa4.8□□□□□ -1.64
SSR3-204ENST00000467733 CALML3P27482 149 aa4.8□□□□□ -1.64
SSR3-204ENST00000467733 HOXC8P31273 242 aa4.8□□□□□ -1.64
SSR3-204ENST00000467733 THPOP40225 353 aa4.8□□□□□ -1.64
SSR3-204ENST00000467733 NRIP1P48552 1158 aa4.8□□□□□ -1.64
SSR3-204ENST00000467733 CLCN5P51795 746 aa4.8□□□□□ -1.64
SSR3-204ENST00000467733 MRPL12P52815 198 aaKnown RBP4.8□□□□□ -1.64
SSR3-204ENST00000467733 RARSP54136 660 aaKnown RBP4.8□□□□□ -1.64
SSR3-204ENST00000467733 JAM2P57087 298 aa4.8□□□□□ -1.64
SSR3-204ENST00000467733 SNAP25P60880 206 aa4.8□□□□□ -1.64
SSR3-204ENST00000467733 UBE3CQ15386 1083 aa4.8□□□□□ -1.64
SSR3-204ENST00000467733 STILQ15468 1287 aa4.8□□□□□ -1.64
SSR3-204ENST00000467733 ST3GAL2Q16842 350 aa4.8□□□□□ -1.64
SSR3-204ENST00000467733 KIAA0753Q2KHM9 967 aa4.8□□□□□ -1.64
SSR3-204ENST00000467733 GIMAP6Q6P9H5 292 aa4.8□□□□□ -1.64
SSR3-204ENST00000467733 UBE2R2Q712K3 238 aaPredicted RBP4.8□□□□□ -1.64
SSR3-204ENST00000467733 LARP4Q71RC2 724 aaKnown RBP eCLIP4.8□□□□□ -1.64
SSR3-204ENST00000467733 FGD2Q7Z6J4 655 aa4.8□□□□□ -1.64
SSR3-204ENST00000467733 ERC1Q8IUD2 1116 aa4.8□□□□□ -1.64
SSR3-204ENST00000467733 DHX37Q8IY37 1157 aaKnown RBP4.8□□□□□ -1.64
SSR3-204ENST00000467733 CCDC105Q8IYK2 499 aa4.8□□□□□ -1.64
SSR3-204ENST00000467733 KIAA2013Q8IYS2 634 aa4.8□□□□□ -1.64
SSR3-204ENST00000467733 CISD2Q8N5K1 135 aaKnown RBP4.8□□□□□ -1.64
SSR3-204ENST00000467733 RANBP17Q9H2T7 1088 aaKnown RBP4.8□□□□□ -1.64
SSR3-204ENST00000467733 ZNF287Q9HBT7 754 aa4.8□□□□□ -1.64
SSR3-204ENST00000467733 FANCLQ9NW38 375 aa4.8□□□□□ -1.64
SSR3-204ENST00000467733 PAG1Q9NWQ8 432 aa4.8□□□□□ -1.64
SSR3-204ENST00000467733 GALNT8Q9NY28 637 aa4.8□□□□□ -1.64
SSR3-204ENST00000467733 SORCS3Q9UPU3 1222 aa4.8□□□□□ -1.64
SSR3-204ENST00000467733 COQ6Q9Y2Z9 468 aa4.8□□□□□ -1.64
SSR3-204ENST00000467733 MRPL42Q9Y6G3 142 aaKnown RBP4.8□□□□□ -1.64
SSR3-204ENST00000467733 NBEAQ8NFP9 2946 aa4.8□□□□□ -1.64
SSR3-204ENST00000467733 ASH1LQ9NR48 2969 aaKnown RBP4.8□□□□□ -1.64
SSR3-204ENST00000467733 PATJQ8NI35 1801 aa4.79□□□□□ -1.64
SSR3-204ENST00000467733 C2orf16Q68DN1 1984 aa4.79□□□□□ -1.64
SSR3-204ENST00000467733 GSG1L2A8MUP6 293 aa4.79□□□□□ -1.64
SSR3-204ENST00000467733 MAN2B1O00754 1011 aa4.79□□□□□ -1.64
SSR3-204ENST00000467733 IPO8O15397 1037 aaKnown RBP4.79□□□□□ -1.64
SSR3-204ENST00000467733 CLASP2O75122 1294 aaKnown RBP4.79□□□□□ -1.64
SSR3-204ENST00000467733 HIP1RO75146 1068 aa4.79□□□□□ -1.64
SSR3-204ENST00000467733 PRDM1O75626 825 aa4.79□□□□□ -1.64
SSR3-204ENST00000467733 RFPL3O75679 317 aa4.79□□□□□ -1.64
SSR3-204ENST00000467733 AMY2AP04746 511 aa4.79□□□□□ -1.64
SSR3-204ENST00000467733 TSPY3P0CV98 308 aa4.79□□□□□ -1.64
SSR3-204ENST00000467733 TSPY8P0CW00 308 aa4.79□□□□□ -1.64
SSR3-204ENST00000467733 AMY2BP19961 511 aa4.79□□□□□ -1.64
SSR3-204ENST00000467733 FBLP22087 321 aaKnown RBP4.79□□□□□ -1.64
SSR3-204ENST00000467733 MCCP23508 829 aa4.79□□□□□ -1.64
SSR3-204ENST00000467733 DNAJB1P25685 340 aa4.79□□□□□ -1.64
SSR3-204ENST00000467733 AOAHP28039 575 aa4.79□□□□□ -1.64
SSR3-204ENST00000467733 ADCY8P40145 1251 aa4.79□□□□□ -1.64
SSR3-204ENST00000467733 RPS6P62753 249 aaKnown RBP4.79□□□□□ -1.64
Retrieved 100 of 20,778 RNA–protein pairs in 32.6 ms