RNA–Protein interactions for RNA: ENST00000467319.1

MSH5-212, Transcript of mutS homolog 5, humanhuman

TSL 2

Gene MSH5, Length 688 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH5-212ENST00000467319 IFRD2Q12894 506 aaPredicted RBP11.65□□□□□ -0.54
MSH5-212ENST00000467319 USP4Q13107 963 aa11.65□□□□□ -0.54
MSH5-212ENST00000467319 ZNF268Q14587 947 aaPredicted RBP11.65□□□□□ -0.54
MSH5-212ENST00000467319 NR1I3Q14994 352 aa11.65□□□□□ -0.54
MSH5-212ENST00000467319 TXNDC8Q6A555 127 aa11.65□□□□□ -0.54
MSH5-212ENST00000467319 TANGO2Q6ICL3 276 aa11.65□□□□□ -0.54
MSH5-212ENST00000467319 DENND1BQ6P3S1 775 aa11.65□□□□□ -0.54
MSH5-212ENST00000467319 VITQ6UXI7 678 aa11.65□□□□□ -0.54
MSH5-212ENST00000467319 SLC47A2Q86VL8 602 aa11.65□□□□□ -0.54
MSH5-212ENST00000467319 ARID3BQ8IVW6 561 aaPredicted RBP11.65□□□□□ -0.54
MSH5-212ENST00000467319 UBALD2Q8IYN6 164 aa11.65□□□□□ -0.54
MSH5-212ENST00000467319 SCML4Q8N228 414 aa11.65□□□□□ -0.54
MSH5-212ENST00000467319 SLC44A3Q8N4M1 653 aa11.65□□□□□ -0.54
MSH5-212ENST00000467319 NEK11Q8NG66 645 aa11.65□□□□□ -0.54
MSH5-212ENST00000467319 RIN3Q8TB24 985 aa11.65□□□□□ -0.54
MSH5-212ENST00000467319 EPS8L1Q8TE68 723 aa11.65□□□□□ -0.54
MSH5-212ENST00000467319 ZNF606Q8WXB4 792 aa11.65□□□□□ -0.54
MSH5-212ENST00000467319 DDX1Q92499 740 aaKnown RBP11.65□□□□□ -0.54
MSH5-212ENST00000467319 USP13Q92995 863 aaPredicted RBP11.65□□□□□ -0.54
MSH5-212ENST00000467319 SECISBP2LQ93073 1101 aaKnown RBP11.65□□□□□ -0.54
MSH5-212ENST00000467319 PLA2G2FQ9BZM2 168 aa11.65□□□□□ -0.54
MSH5-212ENST00000467319 TTYH3Q9C0H2 523 aa11.65□□□□□ -0.54
MSH5-212ENST00000467319 KIF9Q9HAQ2 790 aa11.65□□□□□ -0.54
MSH5-212ENST00000467319 CYLDQ9NQC7 956 aa11.65□□□□□ -0.54
MSH5-212ENST00000467319 SLC2A4RGQ9NR83 387 aa11.65□□□□□ -0.54
MSH5-212ENST00000467319 PCDHGC3Q9UN70 934 aa11.65□□□□□ -0.54
MSH5-212ENST00000467319 TRAV19A0A0A6YYK7 116 aa11.64□□□□□ -0.55
MSH5-212ENST00000467319 ARNTLO00327 626 aa11.64□□□□□ -0.55
MSH5-212ENST00000467319 MED7O43513 233 aa11.64□□□□□ -0.55
MSH5-212ENST00000467319 NARSO43776 548 aaKnown RBP11.64□□□□□ -0.55
MSH5-212ENST00000467319 CFHP08603 1231 aa11.64□□□□□ -0.55
MSH5-212ENST00000467319 SRFP11831 508 aa11.64□□□□□ -0.55
MSH5-212ENST00000467319 TCF3P15923 654 aa11.64□□□□□ -0.55
MSH5-212ENST00000467319 USP8P40818 1118 aa11.64□□□□□ -0.55
MSH5-212ENST00000467319 VIPR2P41587 438 aa11.64□□□□□ -0.55
MSH5-212ENST00000467319 GPD2P43304 727 aa11.64□□□□□ -0.55
MSH5-212ENST00000467319 PDE6CP51160 858 aa11.64□□□□□ -0.55
MSH5-212ENST00000467319 SLC8A3P57103 927 aa11.64□□□□□ -0.55
MSH5-212ENST00000467319 SLC7A9P82251 487 aa11.64□□□□□ -0.55
MSH5-212ENST00000467319 ZXDAP98168 799 aa11.64□□□□□ -0.55
MSH5-212ENST00000467319 ADIGQ0VDE8 80 aa11.64□□□□□ -0.55
MSH5-212ENST00000467319 PDCLQ13371 301 aa11.64□□□□□ -0.55
MSH5-212ENST00000467319 PM20D1Q6GTS8 502 aa11.64□□□□□ -0.55
MSH5-212ENST00000467319 PMF1Q6P1K2 205 aa11.64□□□□□ -0.55
MSH5-212ENST00000467319 SCD5Q86SK9 330 aa11.64□□□□□ -0.55
MSH5-212ENST00000467319 ZNF276Q8N554 614 aa11.64□□□□□ -0.55
MSH5-212ENST00000467319 MAB21L3Q8N8X9 362 aa11.64□□□□□ -0.55
MSH5-212ENST00000467319 ST13P5Q8NFI4 369 aaPredicted RBP11.64□□□□□ -0.55
MSH5-212ENST00000467319 UBA3Q8TBC4 463 aa11.64□□□□□ -0.55
MSH5-212ENST00000467319 STK32AQ8WU08 396 aa11.64□□□□□ -0.55
MSH5-212ENST00000467319 DEPDC1BQ8WUY9 529 aa11.64□□□□□ -0.55
MSH5-212ENST00000467319 BAP1Q92560 729 aa11.64□□□□□ -0.55
MSH5-212ENST00000467319 E2F7Q96AV8 911 aa11.64□□□□□ -0.55
MSH5-212ENST00000467319 ZFRQ96KR1 1074 aaKnown RBP11.64□□□□□ -0.55
MSH5-212ENST00000467319 LRRC3BQ96PB8 259 aa11.64□□□□□ -0.55
MSH5-212ENST00000467319 SMG9Q9H0W8 520 aaKnown RBP11.64□□□□□ -0.55
MSH5-212ENST00000467319 NMUR1Q9HB89 426 aa11.64□□□□□ -0.55
MSH5-212ENST00000467319 ZFP14Q9HCL3 533 aa11.64□□□□□ -0.55
MSH5-212ENST00000467319 TRPC7Q9HCX4 862 aa11.64□□□□□ -0.55
MSH5-212ENST00000467319 NLRC4Q9NPP4 1024 aa11.64□□□□□ -0.55
MSH5-212ENST00000467319 OSER1Q9NX31 292 aa11.64□□□□□ -0.55
MSH5-212ENST00000467319 CYTH4Q9UIA0 394 aa11.64□□□□□ -0.55
MSH5-212ENST00000467319 NOCTQ9UK39 431 aaKnown RBP11.64□□□□□ -0.55
MSH5-212ENST00000467319 ARHGAP26Q9UNA1 814 aa11.64□□□□□ -0.55
MSH5-212ENST00000467319 CCL26Q9Y258 94 aa11.64□□□□□ -0.55
MSH5-212ENST00000467319 MYO10Q9HD67 2058 aa11.64□□□□□ -0.55
MSH5-212ENST00000467319 HEPACAM2A8MVW5 462 aa11.63□□□□□ -0.55
MSH5-212ENST00000467319 COCHO43405 550 aa11.63□□□□□ -0.55
MSH5-212ENST00000467319 SERPINC1P01008 464 aa11.63□□□□□ -0.55
MSH5-212ENST00000467319 CKMP06732 381 aa11.63□□□□□ -0.55
MSH5-212ENST00000467319 USP17L7P0C7H9 530 aa11.63□□□□□ -0.55
MSH5-212ENST00000467319 ALADP13716 330 aa11.63□□□□□ -0.55
MSH5-212ENST00000467319 CYP11B1P15538 503 aa11.63□□□□□ -0.55
MSH5-212ENST00000467319 CDH5P33151 784 aaPredicted RBP11.63□□□□□ -0.55
MSH5-212ENST00000467319 SOX5P35711 763 aa11.63□□□□□ -0.55
MSH5-212ENST00000467319 AVPR1AP37288 418 aa11.63□□□□□ -0.55
MSH5-212ENST00000467319 TKTL1P51854 596 aa11.63□□□□□ -0.55
MSH5-212ENST00000467319 BPIFB4P59827 614 aa11.63□□□□□ -0.55
MSH5-212ENST00000467319 PTK2Q05397 1052 aa11.63□□□□□ -0.55
MSH5-212ENST00000467319 ZNF77Q15935 545 aa11.63□□□□□ -0.55
MSH5-212ENST00000467319 FILIP1LQ4L180 1135 aa11.63□□□□□ -0.55
MSH5-212ENST00000467319 FIGNQ5HY92 759 aa11.63□□□□□ -0.55
MSH5-212ENST00000467319 NOP9Q86U38 636 aaKnown RBP11.63□□□□□ -0.55
MSH5-212ENST00000467319 WDTC1Q8N5D0 677 aa11.63□□□□□ -0.55
MSH5-212ENST00000467319 CELF5Q8N6W0 485 aaKnown RBP11.63□□□□□ -0.55
MSH5-212ENST00000467319 ARL14EPQ8N8R7 260 aaPredicted RBP11.63□□□□□ -0.55
MSH5-212ENST00000467319 EDAQ92838 391 aa11.63□□□□□ -0.55
MSH5-212ENST00000467319 ASIC4Q96FT7 647 aa11.63□□□□□ -0.55
MSH5-212ENST00000467319 HSFY1Q96LI6 401 aa11.63□□□□□ -0.55
MSH5-212ENST00000467319 SLC4A5Q9BY07 1137 aa11.63□□□□□ -0.55
MSH5-212ENST00000467319 ULBP1Q9BZM6 244 aa11.63□□□□□ -0.55
MSH5-212ENST00000467319 LHX5Q9H2C1 402 aa11.63□□□□□ -0.55
MSH5-212ENST00000467319 C11orf16Q9NQ32 467 aa11.63□□□□□ -0.55
MSH5-212ENST00000467319 TLR8Q9NR97 1041 aaKnown RBP11.63□□□□□ -0.55
MSH5-212ENST00000467319 TDP1Q9NUW8 608 aa11.63□□□□□ -0.55
MSH5-212ENST00000467319 MTPAPQ9NVV4 582 aaKnown RBP eCLIP11.63□□□□□ -0.55
MSH5-212ENST00000467319 CLIC5Q9NZA1 410 aa11.63□□□□□ -0.55
MSH5-212ENST00000467319 MYO6Q9UM54 1294 aa11.63□□□□□ -0.55
MSH5-212ENST00000467319 A0A1W2PQH9 124 aa11.62□□□□□ -0.55
MSH5-212ENST00000467319 DLL1O00548 723 aa11.62□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 25.2 ms