RNA–Protein interactions for RNA: ENST00000466780.5

PDZRN3-205, Transcript of PDZ domain containing ring finger 3, humanhuman

TSL 2 BASIC

Gene PDZRN3, Length 2,737 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDZRN3-205ENST00000466780 CYB561D2O14569 222 aa13.54□□□□□ -0.24
PDZRN3-205ENST00000466780 DKC1O60832 514 aaKnown RBP eCLIP13.54□□□□□ -0.24
PDZRN3-205ENST00000466780 TM7SF2O76062 418 aa13.54□□□□□ -0.24
PDZRN3-205ENST00000466780 APOC2P02655 101 aa13.54□□□□□ -0.24
PDZRN3-205ENST00000466780 CCND2P30279 289 aa13.54□□□□□ -0.24
PDZRN3-205ENST00000466780 ABCD1P33897 745 aa13.54□□□□□ -0.24
PDZRN3-205ENST00000466780 KDSRQ06136 332 aa13.54□□□□□ -0.24
PDZRN3-205ENST00000466780 ABHD15Q6UXT9 468 aa13.54□□□□□ -0.24
PDZRN3-205ENST00000466780 IZUMO2Q6UXV1 221 aa13.54□□□□□ -0.24
PDZRN3-205ENST00000466780 SMC1BQ8NDV3 1235 aa13.54□□□□□ -0.24
PDZRN3-205ENST00000466780 DEPTORQ8TB45 409 aa13.54□□□□□ -0.24
PDZRN3-205ENST00000466780 SHKBP1Q8TBC3 707 aa13.54□□□□□ -0.24
PDZRN3-205ENST00000466780 MTMR12Q9C0I1 747 aa13.54□□□□□ -0.24
PDZRN3-205ENST00000466780 PLAC1Q9HBJ0 212 aa13.54□□□□□ -0.24
PDZRN3-205ENST00000466780 JPH1Q9HDC5 661 aaPredicted RBP13.54□□□□□ -0.24
PDZRN3-205ENST00000466780 PLLPQ9Y342 182 aa13.54□□□□□ -0.24
PDZRN3-205ENST00000466780 SIP14410 1827 aa13.53□□□□□ -0.24
PDZRN3-205ENST00000466780 CCDC195A0A1B0GUA6 201 aa13.53□□□□□ -0.24
PDZRN3-205ENST00000466780 ACTR3P61158 418 aa13.53□□□□□ -0.24
PDZRN3-205ENST00000466780 TEX44Q53QW1 395 aa13.53□□□□□ -0.24
PDZRN3-205ENST00000466780 TTC39BQ5VTQ0 682 aaPredicted RBP13.53□□□□□ -0.24
PDZRN3-205ENST00000466780 SLC26A11Q86WA9 606 aa13.53□□□□□ -0.24
PDZRN3-205ENST00000466780 PPM1NQ8N819 430 aa13.53□□□□□ -0.24
PDZRN3-205ENST00000466780 SPATA18Q8TC71 538 aa13.53□□□□□ -0.24
PDZRN3-205ENST00000466780 KCNN1Q92952 543 aa13.53□□□□□ -0.24
PDZRN3-205ENST00000466780 CFAP36Q96G28 342 aa13.53□□□□□ -0.24
PDZRN3-205ENST00000466780 ACAP3Q96P50 834 aa13.53□□□□□ -0.24
PDZRN3-205ENST00000466780 NR1H4Q96RI1 486 aaPredicted RBP13.53□□□□□ -0.24
PDZRN3-205ENST00000466780 THTPAQ9BU02 230 aa13.53□□□□□ -0.24
PDZRN3-205ENST00000466780 TRIM4Q9C037 500 aa13.53□□□□□ -0.24
PDZRN3-205ENST00000466780 C20orf27Q9GZN8 174 aa13.53□□□□□ -0.24
PDZRN3-205ENST00000466780 NIF3L1Q9GZT8 377 aa13.53□□□□□ -0.24
PDZRN3-205ENST00000466780 ASCC2Q9H1I8 757 aaPredicted RBP13.53□□□□□ -0.24
PDZRN3-205ENST00000466780 PORCNQ9H237 461 aa13.53□□□□□ -0.24
PDZRN3-205ENST00000466780 PNPLA8Q9NP80 782 aa13.53□□□□□ -0.24
PDZRN3-205ENST00000466780 PDP2Q9P2J9 529 aa13.53□□□□□ -0.24
PDZRN3-205ENST00000466780 TAGLN3Q9UI15 199 aa13.53□□□□□ -0.24
PDZRN3-205ENST00000466780 MCF2LO15068 1137 aa13.53□□□□□ -0.24
PDZRN3-205ENST00000466780 USP1O94782 785 aa13.53□□□□□ -0.24
PDZRN3-205ENST00000466780 RTN3O95197 1032 aaPredicted RBP13.53□□□□□ -0.24
PDZRN3-205ENST00000466780 ZCCHC18P0CG32 403 aa13.53□□□□□ -0.24
PDZRN3-205ENST00000466780 NAMPTP43490 491 aa13.53□□□□□ -0.24
PDZRN3-205ENST00000466780 TMPRSS15P98073 1019 aa13.53□□□□□ -0.24
PDZRN3-205ENST00000466780 HADHQ16836 314 aaKnown RBP13.53□□□□□ -0.24
PDZRN3-205ENST00000466780 TRMT5Q32P41 509 aaKnown RBP13.53□□□□□ -0.24
PDZRN3-205ENST00000466780 NBPF20Q3BBV1 942 aa13.53□□□□□ -0.24
PDZRN3-205ENST00000466780 XKR3Q5GH77 459 aa13.53□□□□□ -0.24
PDZRN3-205ENST00000466780 SCARA5Q6ZMJ2 495 aa13.53□□□□□ -0.24
PDZRN3-205ENST00000466780 CTAGE3PQ8IX95 158 aa13.53□□□□□ -0.24
PDZRN3-205ENST00000466780 KCTD6Q8NC69 237 aa13.53□□□□□ -0.24
PDZRN3-205ENST00000466780 CMASQ8NFW8 434 aaPredicted RBP13.53□□□□□ -0.24
PDZRN3-205ENST00000466780 ZNF526Q8TF50 670 aaPredicted RBP13.53□□□□□ -0.24
PDZRN3-205ENST00000466780 E2F7Q96AV8 911 aa13.53□□□□□ -0.24
PDZRN3-205ENST00000466780 GMLQ99445 158 aa13.53□□□□□ -0.24
PDZRN3-205ENST00000466780 CCDC106Q9BWC9 280 aa13.53□□□□□ -0.24
PDZRN3-205ENST00000466780 IQCGQ9H095 443 aaKnown RBP13.53□□□□□ -0.24
PDZRN3-205ENST00000466780 SIRPGQ9P1W8 387 aa13.53□□□□□ -0.24
PDZRN3-205ENST00000466780 MARCOQ9UEW3 520 aaPredicted RBP13.53□□□□□ -0.24
PDZRN3-205ENST00000466780 PPM1HQ9ULR3 514 aa13.53□□□□□ -0.24
PDZRN3-205ENST00000466780 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP13.52□□□□□ -0.24
PDZRN3-205ENST00000466780 I3L4J1 428 aa13.52□□□□□ -0.24
PDZRN3-205ENST00000466780 UGT1A9O60656 530 aa13.52□□□□□ -0.24
PDZRN3-205ENST00000466780 RFPL1O75677 317 aa13.52□□□□□ -0.24
PDZRN3-205ENST00000466780 KITP10721 976 aa13.52□□□□□ -0.24
PDZRN3-205ENST00000466780 HIRAP54198 1017 aaPredicted RBP13.52□□□□□ -0.24
PDZRN3-205ENST00000466780 AQP5P55064 265 aa13.52□□□□□ -0.24
PDZRN3-205ENST00000466780 YWHAZP63104 245 aaKnown RBP13.52□□□□□ -0.24
PDZRN3-205ENST00000466780 MMRN1Q13201 1228 aa13.52□□□□□ -0.24
PDZRN3-205ENST00000466780 CHI3L2Q15782 390 aa13.52□□□□□ -0.24
PDZRN3-205ENST00000466780 FNIP1Q8TF40 1166 aa13.52□□□□□ -0.24
PDZRN3-205ENST00000466780 HSPH1Q92598 858 aa13.52□□□□□ -0.24
PDZRN3-205ENST00000466780 LPAR1Q92633 364 aa13.52□□□□□ -0.24
PDZRN3-205ENST00000466780 TUBGCP5Q96RT8 1024 aa13.52□□□□□ -0.24
PDZRN3-205ENST00000466780 ECSITQ9BQ95 431 aa13.52□□□□□ -0.24
PDZRN3-205ENST00000466780 UGT1A7Q9HAW7 530 aa13.52□□□□□ -0.24
PDZRN3-205ENST00000466780 UGT1A10Q9HAW8 530 aa13.52□□□□□ -0.24
PDZRN3-205ENST00000466780 UGT1A8Q9HAW9 530 aa13.52□□□□□ -0.24
PDZRN3-205ENST00000466780 SMYD2Q9NRG4 433 aa13.52□□□□□ -0.24
PDZRN3-205ENST00000466780 SPECC1L-ADORA2AF8WAN1 911 aa13.52□□□□□ -0.25
PDZRN3-205ENST00000466780 MIPP30301 263 aa13.52□□□□□ -0.25
PDZRN3-205ENST00000466780 ARL2P36404 184 aa13.52□□□□□ -0.25
PDZRN3-205ENST00000466780 PSMC1P62191 440 aaKnown RBP13.52□□□□□ -0.25
PDZRN3-205ENST00000466780 BMPR2Q13873 1038 aa13.52□□□□□ -0.25
PDZRN3-205ENST00000466780 ANGEL2Q5VTE6 544 aaKnown RBP13.52□□□□□ -0.25
PDZRN3-205ENST00000466780 XRRA1Q6P2D8 792 aa13.52□□□□□ -0.25
PDZRN3-205ENST00000466780 BRSK2Q8IWQ3 736 aa13.52□□□□□ -0.25
PDZRN3-205ENST00000466780 SLC25A41Q8N5S1 370 aa13.52□□□□□ -0.25
PDZRN3-205ENST00000466780 TTLL6Q8N841 843 aa13.52□□□□□ -0.25
PDZRN3-205ENST00000466780 AZIN2Q96A70 460 aa13.52□□□□□ -0.25
PDZRN3-205ENST00000466780 GBP5Q96PP8 586 aa13.52□□□□□ -0.25
PDZRN3-205ENST00000466780 TTC1Q99614 292 aa13.52□□□□□ -0.25
PDZRN3-205ENST00000466780 CALN1Q9BXU9 219 aa13.52□□□□□ -0.25
PDZRN3-205ENST00000466780 WWP1Q9H0M0 922 aa13.52□□□□□ -0.25
PDZRN3-205ENST00000466780 RNF146Q9NTX7 359 aa13.52□□□□□ -0.25
PDZRN3-205ENST00000466780 PRR5-ARHGAP8B1AHC4 643 aa13.51□□□□□ -0.25
PDZRN3-205ENST00000466780 MAFGO15525 162 aa13.51□□□□□ -0.25
PDZRN3-205ENST00000466780 FAM189A1O60320 539 aa13.51□□□□□ -0.25
PDZRN3-205ENST00000466780 SPAG6O75602 509 aa13.51□□□□□ -0.25
PDZRN3-205ENST00000466780 SNRPAP09012 282 aaKnown RBP13.51□□□□□ -0.25
PDZRN3-205ENST00000466780 CRABP2P29373 138 aa13.51□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 59.4 ms