RNA–Protein interactions for RNA: ENST00000466591.1

COL7A1-206, Transcript of collagen type VII alpha 1 chain, humanhuman

TSL 2

Gene COL7A1, Length 778 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL7A1-206ENST00000466591 PALM2-AKAP2B1ALY0 433 aaPredicted RBP18.56■□□□□ 0.56
COL7A1-206ENST00000466591 VNN1O95497 513 aa18.56■□□□□ 0.56
COL7A1-206ENST00000466591 OAS1P00973 400 aaKnown RBP18.56■□□□□ 0.56
COL7A1-206ENST00000466591 APODP05090 189 aa18.56■□□□□ 0.56
COL7A1-206ENST00000466591 PRR29P0C7W0 189 aa18.56■□□□□ 0.56
COL7A1-206ENST00000466591 FAM200BP0CF97 657 aa18.56■□□□□ 0.56
COL7A1-206ENST00000466591 PSMC2P35998 433 aaKnown RBP18.56■□□□□ 0.56
COL7A1-206ENST00000466591 MAP3K7CLP57077 242 aa18.56■□□□□ 0.56
COL7A1-206ENST00000466591 CLDN10P78369 228 aa18.56■□□□□ 0.56
COL7A1-206ENST00000466591 BECN1Q14457 450 aa18.56■□□□□ 0.56
COL7A1-206ENST00000466591 SPOPLQ6IQ16 392 aa18.56■□□□□ 0.56
COL7A1-206ENST00000466591 KRBA2Q6ZNG9 492 aa18.56■□□□□ 0.56
COL7A1-206ENST00000466591 NUDT18Q6ZVK8 323 aa18.56■□□□□ 0.56
COL7A1-206ENST00000466591 UNC93AQ86WB7 457 aa18.56■□□□□ 0.56
COL7A1-206ENST00000466591 SCAMP5Q8TAC9 235 aa18.56■□□□□ 0.56
COL7A1-206ENST00000466591 CHAMP1Q96JM3 812 aa18.56■□□□□ 0.56
COL7A1-206ENST00000466591 PNKPQ96T60 521 aa18.56■□□□□ 0.56
COL7A1-206ENST00000466591 ARRDC1-AS1Q9H2J1 176 aa18.56■□□□□ 0.56
COL7A1-206ENST00000466591 TLR8Q9NR97 1041 aaKnown RBP18.56■□□□□ 0.56
COL7A1-206ENST00000466591 GTF3C3Q9Y5Q9 886 aa18.56■□□□□ 0.56
COL7A1-206ENST00000466591 SPTBN4Q9H254 2564 aa18.56■□□□□ 0.56
COL7A1-206ENST00000466591 OTOGLQ3ZCN5 2332 aa18.56■□□□□ 0.56
COL7A1-206ENST00000466591 AKAP3O75969 853 aa18.55■□□□□ 0.56
COL7A1-206ENST00000466591 ALDH1A2O94788 518 aa18.55■□□□□ 0.56
COL7A1-206ENST00000466591 RHOBTB3O94955 611 aa18.55■□□□□ 0.56
COL7A1-206ENST00000466591 CYP17A1P05093 508 aa18.55■□□□□ 0.56
COL7A1-206ENST00000466591 TRIM49P0CI25 452 aa18.55■□□□□ 0.56
COL7A1-206ENST00000466591 TRIM49CP0CI26 452 aa18.55■□□□□ 0.56
COL7A1-206ENST00000466591 ADH5P11766 374 aa18.55■□□□□ 0.56
COL7A1-206ENST00000466591 CD58P19256 250 aa18.55■□□□□ 0.56
COL7A1-206ENST00000466591 GCLMP48507 274 aa18.55■□□□□ 0.56
COL7A1-206ENST00000466591 ATXN1P54253 815 aaKnown RBP18.55■□□□□ 0.56
COL7A1-206ENST00000466591 ADAM9Q13443 819 aa18.55■□□□□ 0.56
COL7A1-206ENST00000466591 DHCR24Q15392 516 aa18.55■□□□□ 0.56
COL7A1-206ENST00000466591 ANO4Q32M45 955 aa18.55■□□□□ 0.56
COL7A1-206ENST00000466591 PREPLQ4J6C6 727 aaPredicted RBP18.55■□□□□ 0.56
COL7A1-206ENST00000466591 IL31Q6EBC2 164 aa18.55■□□□□ 0.56
COL7A1-206ENST00000466591 KBTBD6Q86V97 674 aa18.55■□□□□ 0.56
COL7A1-206ENST00000466591 NT5C1AQ9BXI3 368 aa18.55■□□□□ 0.56
COL7A1-206ENST00000466591 SDCBP2Q9H190 292 aa18.55■□□□□ 0.56
COL7A1-206ENST00000466591 RMND1Q9NWS8 449 aa18.55■□□□□ 0.56
COL7A1-206ENST00000466591 COMMD8Q9NX08 183 aa18.55■□□□□ 0.56
COL7A1-206ENST00000466591 GMIPQ9P107 970 aa18.55■□□□□ 0.56
COL7A1-206ENST00000466591 LSM7Q9UK45 103 aaKnown RBP18.55■□□□□ 0.56
COL7A1-206ENST00000466591 TRAF3IP3Q9Y228 551 aa18.55■□□□□ 0.56
COL7A1-206ENST00000466591 HELZP42694 1942 aaKnown RBP18.55■□□□□ 0.56
COL7A1-206ENST00000466591 A0A1W2PQ27 194 aa18.54■□□□□ 0.56
COL7A1-206ENST00000466591 A0A1W2PQ64 194 aa18.54■□□□□ 0.56
COL7A1-206ENST00000466591 A0A1W2PQD8 194 aa18.54■□□□□ 0.56
COL7A1-206ENST00000466591 MED19A0JLT2 244 aaPredicted RBP18.54■□□□□ 0.56
COL7A1-206ENST00000466591 DCDC2BA2VCK2 349 aa18.54■□□□□ 0.56
COL7A1-206ENST00000466591 MAPK13O15264 365 aa18.54■□□□□ 0.56
COL7A1-206ENST00000466591 COCHO43405 550 aa18.54■□□□□ 0.56
COL7A1-206ENST00000466591 STX10O60499 249 aa18.54■□□□□ 0.56
COL7A1-206ENST00000466591 RHOBTB1O94844 696 aa18.54■□□□□ 0.56
COL7A1-206ENST00000466591 ZNF202O95125 648 aa18.54■□□□□ 0.56
COL7A1-206ENST00000466591 ASS1P00966 412 aaKnown RBP18.54■□□□□ 0.56
COL7A1-206ENST00000466591 EPB41P11171 864 aaKnown RBP18.54■□□□□ 0.56
COL7A1-206ENST00000466591 KDSRQ06136 332 aa18.54■□□□□ 0.56
COL7A1-206ENST00000466591 DPYDQ12882 1025 aa18.54■□□□□ 0.56
COL7A1-206ENST00000466591 USP39Q53GS9 565 aaKnown RBP18.54■□□□□ 0.56
COL7A1-206ENST00000466591 FUKQ8N0W3 1084 aa18.54■□□□□ 0.56
COL7A1-206ENST00000466591 GUF1Q8N442 669 aaKnown RBP18.54■□□□□ 0.56
COL7A1-206ENST00000466591 CCDC33Q8N5R6 958 aa18.54■□□□□ 0.56
COL7A1-206ENST00000466591 KIAA1958Q8N8K9 716 aa18.54■□□□□ 0.56
COL7A1-206ENST00000466591 LOXL4Q96JB6 756 aa18.54■□□□□ 0.56
COL7A1-206ENST00000466591 TSG101Q99816 390 aa18.54■□□□□ 0.56
COL7A1-206ENST00000466591 CCSER2Q9H7U1 834 aa18.54■□□□□ 0.56
COL7A1-206ENST00000466591 GDPD2Q9HCC8 539 aa18.54■□□□□ 0.56
COL7A1-206ENST00000466591 ARHGEF4Q9NR80 690 aa18.54■□□□□ 0.56
COL7A1-206ENST00000466591 TMEM30AQ9NV96 361 aa18.54■□□□□ 0.56
COL7A1-206ENST00000466591 POLR3BQ9NW08 1133 aaPredicted RBP18.54■□□□□ 0.56
COL7A1-206ENST00000466591 BCCIPQ9P287 314 aaKnown RBP eCLIP18.54■□□□□ 0.56
COL7A1-206ENST00000466591 PTPRDP23468 1912 aa18.53■□□□□ 0.56
COL7A1-206ENST00000466591 GREB1Q4ZG55 1949 aa18.53■□□□□ 0.56
COL7A1-206ENST00000466591 ANAPC1Q9H1A4 1944 aa18.53■□□□□ 0.56
COL7A1-206ENST00000466591 E2F8A0AVK6 867 aa18.53■□□□□ 0.56
COL7A1-206ENST00000466591 OLFM2O95897 454 aa18.53■□□□□ 0.56
COL7A1-206ENST00000466591 HOXC13P31276 330 aa18.53■□□□□ 0.56
COL7A1-206ENST00000466591 ASPAP45381 313 aa18.53■□□□□ 0.56
COL7A1-206ENST00000466591 GAD2Q05329 585 aa18.53■□□□□ 0.56
COL7A1-206ENST00000466591 CCDC6Q16204 474 aa18.53■□□□□ 0.56
COL7A1-206ENST00000466591 ANO7Q6IWH7 933 aa18.53■□□□□ 0.56
COL7A1-206ENST00000466591 C11orf74Q86VG3 221 aa18.53■□□□□ 0.56
COL7A1-206ENST00000466591 ADGRG2Q8IZP9 1017 aa18.53■□□□□ 0.56
COL7A1-206ENST00000466591 PGBD3Q8N328 593 aa18.53■□□□□ 0.56
COL7A1-206ENST00000466591 C12orf29Q8N999 325 aa18.53■□□□□ 0.56
COL7A1-206ENST00000466591 TMEM174Q8WUU8 243 aa18.53■□□□□ 0.56
COL7A1-206ENST00000466591 OTUB2Q96DC9 234 aa18.53■□□□□ 0.56
COL7A1-206ENST00000466591 NIF3L1Q9GZT8 377 aa18.53■□□□□ 0.56
COL7A1-206ENST00000466591 CYP3A43Q9HB55 503 aa18.53■□□□□ 0.56
COL7A1-206ENST00000466591 HMGXB4Q9UGU5 601 aa18.53■□□□□ 0.56
COL7A1-206ENST00000466591 HOOK1Q9UJC3 728 aaKnown RBP18.53■□□□□ 0.56
COL7A1-206ENST00000466591 CETN3O15182 167 aa18.52■□□□□ 0.56
COL7A1-206ENST00000466591 ZBTB24O43167 697 aaPredicted RBP18.52■□□□□ 0.56
COL7A1-206ENST00000466591 TLR5O60602 858 aa18.52■□□□□ 0.56
COL7A1-206ENST00000466591 TIE1P35590 1138 aa18.52■□□□□ 0.56
COL7A1-206ENST00000466591 OPRD1P41143 372 aa18.52■□□□□ 0.56
COL7A1-206ENST00000466591 TUBP50607 506 aa18.52■□□□□ 0.56
COL7A1-206ENST00000466591 SLC8A3P57103 927 aa18.52■□□□□ 0.56
Retrieved 100 of 20,778 RNA–protein pairs in 20.3 ms