RNA–Protein interactions for RNA: ENST00000466260.1

RTFDC1-205, Transcript of Protein RTF2 homolog, humanhuman

TSL 3

Gene RTFDC1, Length 616 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTFDC1-205ENST00000466260 MCCD1P59942 119 aaPredicted RBP10.29□□□□□ -0.76
RTFDC1-205ENST00000466260 APBA1Q02410 837 aa10.29□□□□□ -0.76
RTFDC1-205ENST00000466260 MTF1Q14872 753 aa10.29□□□□□ -0.76
RTFDC1-205ENST00000466260 ARHGAP44Q17R89 818 aa10.29□□□□□ -0.76
RTFDC1-205ENST00000466260 ARHGAP29Q52LW3 1261 aa10.29□□□□□ -0.76
RTFDC1-205ENST00000466260 SGO2Q562F6 1265 aa10.29□□□□□ -0.76
RTFDC1-205ENST00000466260 CC2D1AQ6P1N0 951 aaPredicted RBP10.29□□□□□ -0.76
RTFDC1-205ENST00000466260 C11orf57Q6ZUT1 292 aaPredicted RBP10.29□□□□□ -0.76
RTFDC1-205ENST00000466260 GAS2L3Q86XJ1 694 aa10.29□□□□□ -0.76
RTFDC1-205ENST00000466260 FAM114A1Q8IWE2 563 aa10.29□□□□□ -0.76
RTFDC1-205ENST00000466260 EHBP1Q8NDI1 1231 aa10.29□□□□□ -0.76
RTFDC1-205ENST00000466260 PRSS33Q8NF86 280 aa10.29□□□□□ -0.76
RTFDC1-205ENST00000466260 UBA3Q8TBC4 463 aa10.29□□□□□ -0.76
RTFDC1-205ENST00000466260 DNASE1L2Q92874 299 aa10.29□□□□□ -0.76
RTFDC1-205ENST00000466260 SHDQ96IW2 340 aa10.29□□□□□ -0.76
RTFDC1-205ENST00000466260 HNRNPABQ99729 332 aaKnown RBP10.29□□□□□ -0.76
RTFDC1-205ENST00000466260 TTLL2Q9BWV7 592 aa10.29□□□□□ -0.76
RTFDC1-205ENST00000466260 NACA2Q9H009 215 aa10.29□□□□□ -0.76
RTFDC1-205ENST00000466260 THAP9Q9H5L6 903 aa10.29□□□□□ -0.76
RTFDC1-205ENST00000466260 SAMSN1Q9NSI8 373 aaKnown RBP10.29□□□□□ -0.76
RTFDC1-205ENST00000466260 TMEM63CQ9P1W3 806 aa10.29□□□□□ -0.76
RTFDC1-205ENST00000466260 TSPAN16Q9UKR8 245 aa10.29□□□□□ -0.76
RTFDC1-205ENST00000466260 WNT6Q9Y6F9 365 aa10.29□□□□□ -0.76
RTFDC1-205ENST00000466260 PIAS3Q9Y6X2 628 aa10.29□□□□□ -0.76
RTFDC1-205ENST00000466260 KANSL1LA0AUZ9 987 aa10.28□□□□□ -0.76
RTFDC1-205ENST00000466260 ZNF840PA6NDX5 716 aa10.28□□□□□ -0.76
RTFDC1-205ENST00000466260 KCNJ18B7U540 433 aa10.28□□□□□ -0.76
RTFDC1-205ENST00000466260 RNF225M0QZC1 329 aaPredicted RBP10.28□□□□□ -0.76
RTFDC1-205ENST00000466260 TULP2O00295 520 aa10.28□□□□□ -0.76
RTFDC1-205ENST00000466260 PIK3R2O00459 728 aa10.28□□□□□ -0.76
RTFDC1-205ENST00000466260 TNFRSF10BO14763 440 aa10.28□□□□□ -0.76
RTFDC1-205ENST00000466260 CHADO15335 359 aa10.28□□□□□ -0.76
RTFDC1-205ENST00000466260 P4HA2O15460 535 aa10.28□□□□□ -0.76
RTFDC1-205ENST00000466260 CYP26A1O43174 497 aa10.28□□□□□ -0.76
RTFDC1-205ENST00000466260 ARSAP15289 507 aa10.28□□□□□ -0.76
RTFDC1-205ENST00000466260 SLC9A1P19634 815 aa10.28□□□□□ -0.76
RTFDC1-205ENST00000466260 TARSP26639 723 aaKnown RBP10.28□□□□□ -0.76
RTFDC1-205ENST00000466260 USP8P40818 1118 aa10.28□□□□□ -0.76
RTFDC1-205ENST00000466260 IFNAR2P48551 515 aa10.28□□□□□ -0.76
RTFDC1-205ENST00000466260 PRKCQQ04759 706 aa10.28□□□□□ -0.76
RTFDC1-205ENST00000466260 FCHO2Q0JRZ9 810 aa10.28□□□□□ -0.76
RTFDC1-205ENST00000466260 KCNJ12Q14500 433 aa10.28□□□□□ -0.76
RTFDC1-205ENST00000466260 PHLDB3Q6NSJ2 640 aa10.28□□□□□ -0.76
RTFDC1-205ENST00000466260 TTC30AQ86WT1 665 aa10.28□□□□□ -0.76
RTFDC1-205ENST00000466260 IRF2BP1Q8IU81 584 aa10.28□□□□□ -0.76
RTFDC1-205ENST00000466260 TTC39CQ8N584 583 aa10.28□□□□□ -0.76
RTFDC1-205ENST00000466260 RBBP8NLQ8NC74 664 aaPredicted RBP10.28□□□□□ -0.76
RTFDC1-205ENST00000466260 PDZD8Q8NEN9 1154 aa10.28□□□□□ -0.76
RTFDC1-205ENST00000466260 PJA1Q8NG27 643 aa10.28□□□□□ -0.76
RTFDC1-205ENST00000466260 LMO3Q8TAP4 145 aa10.28□□□□□ -0.76
RTFDC1-205ENST00000466260 SH3RF2Q8TEC5 729 aa10.28□□□□□ -0.76
RTFDC1-205ENST00000466260 PTCD2Q8WV60 388 aaKnown RBP10.28□□□□□ -0.76
RTFDC1-205ENST00000466260 DUSP16Q9BY84 665 aa10.28□□□□□ -0.76
RTFDC1-205ENST00000466260 EBF3Q9H4W6 596 aa10.28□□□□□ -0.76
RTFDC1-205ENST00000466260 CCSER2Q9H7U1 834 aa10.28□□□□□ -0.76
RTFDC1-205ENST00000466260 KIF9Q9HAQ2 790 aa10.28□□□□□ -0.76
RTFDC1-205ENST00000466260 CSNK1G1Q9HCP0 422 aa10.28□□□□□ -0.76
RTFDC1-205ENST00000466260 LTB4R2Q9NPC1 389 aa10.28□□□□□ -0.76
RTFDC1-205ENST00000466260 UBE2TQ9NPD8 197 aaPredicted RBP10.28□□□□□ -0.76
RTFDC1-205ENST00000466260 GKN1Q9NS71 199 aa10.28□□□□□ -0.76
RTFDC1-205ENST00000466260 FAM86C1Q9NVL1 165 aa10.28□□□□□ -0.76
RTFDC1-205ENST00000466260 THG1LQ9NWX6 298 aaKnown RBP10.28□□□□□ -0.76
RTFDC1-205ENST00000466260 OBP2AQ9NY56 170 aa10.28□□□□□ -0.76
RTFDC1-205ENST00000466260 TAB2Q9NYJ8 693 aa10.28□□□□□ -0.76
RTFDC1-205ENST00000466260 HESX1Q9UBX0 185 aa10.28□□□□□ -0.76
RTFDC1-205ENST00000466260 ZMYM5Q9UJ78 669 aa10.28□□□□□ -0.76
RTFDC1-205ENST00000466260 NUDT5Q9UKK9 219 aa10.28□□□□□ -0.76
RTFDC1-205ENST00000466260 SIT1Q9Y3P8 196 aa10.28□□□□□ -0.76
RTFDC1-205ENST00000466260 MTF2Q9Y483 593 aaPredicted RBP10.28□□□□□ -0.76
RTFDC1-205ENST00000466260 NFE2L3Q9Y4A8 694 aa10.28□□□□□ -0.76
RTFDC1-205ENST00000466260 CPQQ9Y646 472 aa10.28□□□□□ -0.76
RTFDC1-205ENST00000466260 TRIOO75962 3097 aa10.28□□□□□ -0.76
RTFDC1-205ENST00000466260 FAM170BA6NMN3 283 aa10.27□□□□□ -0.77
RTFDC1-205ENST00000466260 HHLA1C9JL84 531 aa10.27□□□□□ -0.77
RTFDC1-205ENST00000466260 H0Y858 1186 aa10.27□□□□□ -0.77
RTFDC1-205ENST00000466260 M0QYV0 167 aa10.27□□□□□ -0.77
RTFDC1-205ENST00000466260 LEFTY2O00292 366 aa10.27□□□□□ -0.77
RTFDC1-205ENST00000466260 MDM4O15151 490 aa10.27□□□□□ -0.77
RTFDC1-205ENST00000466260 OAS1P00973 400 aaKnown RBP10.27□□□□□ -0.77
RTFDC1-205ENST00000466260 ERCC5P28715 1186 aaPredicted RBP10.27□□□□□ -0.77
RTFDC1-205ENST00000466260 PGFP49763 221 aa10.27□□□□□ -0.77
RTFDC1-205ENST00000466260 RGS7P49802 495 aa10.27□□□□□ -0.77
RTFDC1-205ENST00000466260 CLCN5P51795 746 aa10.27□□□□□ -0.77
RTFDC1-205ENST00000466260 STARD6P59095 220 aa10.27□□□□□ -0.77
RTFDC1-205ENST00000466260 PDE4CQ08493 712 aa10.27□□□□□ -0.77
RTFDC1-205ENST00000466260 USP4Q13107 963 aa10.27□□□□□ -0.77
RTFDC1-205ENST00000466260 ZNF77Q15935 545 aa10.27□□□□□ -0.77
RTFDC1-205ENST00000466260 STX1AQ16623 288 aa10.27□□□□□ -0.77
RTFDC1-205ENST00000466260 MAN2A1Q16706 1144 aa10.27□□□□□ -0.77
RTFDC1-205ENST00000466260 EXOC3L4Q17RC7 722 aa10.27□□□□□ -0.77
RTFDC1-205ENST00000466260 TRIM65Q6PJ69 517 aa10.27□□□□□ -0.77
RTFDC1-205ENST00000466260 GBP6Q6ZN66 633 aa10.27□□□□□ -0.77
RTFDC1-205ENST00000466260 PIGZQ86VD9 579 aa10.27□□□□□ -0.77
RTFDC1-205ENST00000466260 CCDC105Q8IYK2 499 aa10.27□□□□□ -0.77
RTFDC1-205ENST00000466260 UBR7Q8N806 425 aa10.27□□□□□ -0.77
RTFDC1-205ENST00000466260 FAM3CQ92520 227 aa10.27□□□□□ -0.77
RTFDC1-205ENST00000466260 FAXDC2Q96IV6 333 aa10.27□□□□□ -0.77
RTFDC1-205ENST00000466260 CEP295NLQ96MC4 621 aa10.27□□□□□ -0.77
RTFDC1-205ENST00000466260 KREMEN1Q96MU8 473 aa10.27□□□□□ -0.77
RTFDC1-205ENST00000466260 TUBGCP2Q9BSJ2 902 aa10.27□□□□□ -0.77
Retrieved 100 of 20,778 RNA–protein pairs in 18.3 ms