RNA–Protein interactions for RNA: ENST00000465655.2

RPL39P28-201, Transcript of ribosomal protein L39 pseudogene 28, humanhuman

BASIC

Gene RPL39P28, Length 155 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPL39P28-201ENST00000465655 USP28Q96RU2 1077 aa0.94□□□□□ -2.26
RPL39P28-201ENST00000465655 CCT8L2Q96SF2 557 aa0.94□□□□□ -2.26
RPL39P28-201ENST00000465655 STRBPQ96SI9 672 aaKnown RBP0.94□□□□□ -2.26
RPL39P28-201ENST00000465655 SECISBP2Q96T21 854 aaKnown RBP0.94□□□□□ -2.26
RPL39P28-201ENST00000465655 PNKPQ96T60 521 aa0.94□□□□□ -2.26
RPL39P28-201ENST00000465655 SETDB2Q96T68 719 aa0.94□□□□□ -2.26
RPL39P28-201ENST00000465655 EYA3Q99504 573 aa0.94□□□□□ -2.26
RPL39P28-201ENST00000465655 OLFM1Q99784 485 aa0.94□□□□□ -2.26
RPL39P28-201ENST00000465655 TM9SF2Q99805 663 aa0.94□□□□□ -2.26
RPL39P28-201ENST00000465655 SSX3Q99909 188 aa0.94□□□□□ -2.26
RPL39P28-201ENST00000465655 RBM4BQ9BQ04 359 aaKnown RBP0.94□□□□□ -2.26
RPL39P28-201ENST00000465655 BPIFA3Q9BQP9 254 aa0.94□□□□□ -2.26
RPL39P28-201ENST00000465655 SEC22CQ9BRL7 303 aa0.94□□□□□ -2.26
RPL39P28-201ENST00000465655 ADPGKQ9BRR6 497 aa0.94□□□□□ -2.26
RPL39P28-201ENST00000465655 C17orf80Q9BSJ5 609 aa0.94□□□□□ -2.26
RPL39P28-201ENST00000465655 UBAC1Q9BSL1 405 aa0.94□□□□□ -2.26
RPL39P28-201ENST00000465655 YIPF4Q9BSR8 244 aa0.94□□□□□ -2.26
RPL39P28-201ENST00000465655 WACQ9BTA9 647 aa0.94□□□□□ -2.26
RPL39P28-201ENST00000465655 MCMBPQ9BTE3 642 aa0.94□□□□□ -2.26
RPL39P28-201ENST00000465655 CRB3Q9BUF7 120 aa0.94□□□□□ -2.26
RPL39P28-201ENST00000465655 TARS2Q9BW92 718 aaKnown RBP0.94□□□□□ -2.26
RPL39P28-201ENST00000465655 RBM4Q9BWF3 364 aaKnown RBP0.94□□□□□ -2.26
RPL39P28-201ENST00000465655 SPATA16Q9BXB7 569 aa0.94□□□□□ -2.26
RPL39P28-201ENST00000465655 EMILIN2Q9BXX0 1053 aa0.94□□□□□ -2.26
RPL39P28-201ENST00000465655 LRRC2Q9BYS8 371 aa0.94□□□□□ -2.26
RPL39P28-201ENST00000465655 AGXT2Q9BYV1 514 aa0.94□□□□□ -2.26
RPL39P28-201ENST00000465655 TRIM55Q9BYV6 548 aa0.94□□□□□ -2.26
RPL39P28-201ENST00000465655 ACPTQ9BZG2 426 aa0.94□□□□□ -2.26
RPL39P28-201ENST00000465655 IMPG2Q9BZV3 1241 aa0.94□□□□□ -2.26
RPL39P28-201ENST00000465655 TRIM15Q9C019 465 aa0.94□□□□□ -2.26
RPL39P28-201ENST00000465655 UNKQ9C0B0 810 aaKnown RBP0.94□□□□□ -2.26
RPL39P28-201ENST00000465655 TGIF2Q9GZN2 237 aa0.94□□□□□ -2.26
RPL39P28-201ENST00000465655 XRN2Q9H0D6 950 aaKnown RBP eCLIP0.94□□□□□ -2.26
RPL39P28-201ENST00000465655 WNT8AQ9H1J5 351 aa0.94□□□□□ -2.26
RPL39P28-201ENST00000465655 NUP62CLQ9H1M0 184 aa0.94□□□□□ -2.26
RPL39P28-201ENST00000465655 EPN3Q9H201 632 aa0.94□□□□□ -2.26
RPL39P28-201ENST00000465655 DPH5Q9H2P9 285 aa0.94□□□□□ -2.26
RPL39P28-201ENST00000465655 SLC12A5Q9H2X9 1139 aa0.94□□□□□ -2.26
RPL39P28-201ENST00000465655 RNF41Q9H4P4 317 aaPredicted RBP0.94□□□□□ -2.26
RPL39P28-201ENST00000465655 NCOR1P1Q9H4R4 102 aa0.94□□□□□ -2.26
RPL39P28-201ENST00000465655 TFB2MQ9H5Q4 396 aaKnown RBP0.94□□□□□ -2.26
RPL39P28-201ENST00000465655 STN1Q9H668 368 aaKnown RBP0.94□□□□□ -2.26
RPL39P28-201ENST00000465655 DENND2DQ9H6A0 471 aaPredicted RBP0.94□□□□□ -2.26
RPL39P28-201ENST00000465655 XKR8Q9H6D3 395 aa0.94□□□□□ -2.26
RPL39P28-201ENST00000465655 HAUS4Q9H6D7 363 aa0.94□□□□□ -2.26
RPL39P28-201ENST00000465655 CCDC86Q9H6F5 360 aaKnown RBP0.94□□□□□ -2.26
RPL39P28-201ENST00000465655 ARMC7Q9H6L4 198 aa0.94□□□□□ -2.26
RPL39P28-201ENST00000465655 AZI2Q9H6S1 392 aa0.94□□□□□ -2.26
RPL39P28-201ENST00000465655 DCTPP1Q9H773 170 aa0.94□□□□□ -2.26
RPL39P28-201ENST00000465655 C10orf88Q9H8K7 445 aa0.94□□□□□ -2.26
RPL39P28-201ENST00000465655 EVA1AQ9H8M9 152 aa0.94□□□□□ -2.26
RPL39P28-201ENST00000465655 ANKZF1Q9H8Y5 726 aa0.94□□□□□ -2.26
RPL39P28-201ENST00000465655 ZNF408Q9H9D4 720 aa0.94□□□□□ -2.26
RPL39P28-201ENST00000465655 ERVMER34-1Q9H9K5 563 aa0.94□□□□□ -2.26
RPL39P28-201ENST00000465655 XPO5Q9HAV4 1204 aaKnown RBP eCLIP0.94□□□□□ -2.26
RPL39P28-201ENST00000465655 SP110Q9HB58 689 aa0.94□□□□□ -2.26
RPL39P28-201ENST00000465655 PLGRKTQ9HBL7 147 aa0.94□□□□□ -2.26
RPL39P28-201ENST00000465655 SPACA1Q9HBV2 294 aa0.94□□□□□ -2.26
RPL39P28-201ENST00000465655 CBX8Q9HC52 389 aa0.94□□□□□ -2.26
RPL39P28-201ENST00000465655 FBRSL1Q9HCM7 1045 aaKnown RBP0.94□□□□□ -2.26
RPL39P28-201ENST00000465655 S100A14Q9HCY8 104 aa0.94□□□□□ -2.26
RPL39P28-201ENST00000465655 TREM1Q9NP99 234 aa0.94□□□□□ -2.26
RPL39P28-201ENST00000465655 PRDM5Q9NQX1 630 aaPredicted RBP0.94□□□□□ -2.26
RPL39P28-201ENST00000465655 GLRX2Q9NS18 164 aa0.94□□□□□ -2.26
RPL39P28-201ENST00000465655 TOPORSQ9NS56 1045 aaPredicted RBP0.94□□□□□ -2.26
RPL39P28-201ENST00000465655 ZNF275Q9NSD4 429 aaPredicted RBP0.94□□□□□ -2.26
RPL39P28-201ENST00000465655 IARS2Q9NSE4 1012 aaKnown RBP0.94□□□□□ -2.26
RPL39P28-201ENST00000465655 SAMSN1Q9NSI8 373 aaKnown RBP0.94□□□□□ -2.26
RPL39P28-201ENST00000465655 SACM1LQ9NTJ5 587 aa0.94□□□□□ -2.26
RPL39P28-201ENST00000465655 SETD4Q9NVD3 440 aa0.94□□□□□ -2.26
RPL39P28-201ENST00000465655 DNAJC11Q9NVH1 559 aa0.94□□□□□ -2.26
RPL39P28-201ENST00000465655 NMRK1Q9NWW6 199 aa0.94□□□□□ -2.26
RPL39P28-201ENST00000465655 ZSCAN32Q9NX65 697 aa0.94□□□□□ -2.26
RPL39P28-201ENST00000465655 SYBUQ9NX95 663 aa0.94□□□□□ -2.26
RPL39P28-201ENST00000465655 THUMPD1Q9NXG2 353 aaKnown RBP0.94□□□□□ -2.26
RPL39P28-201ENST00000465655 PPP1R14DQ9NXH3 145 aa0.94□□□□□ -2.26
RPL39P28-201ENST00000465655 GIN1Q9NXP7 522 aa0.94□□□□□ -2.26
RPL39P28-201ENST00000465655 OBP2AQ9NY56 170 aa0.94□□□□□ -2.26
RPL39P28-201ENST00000465655 SNTG2Q9NY99 539 aa0.94□□□□□ -2.26
RPL39P28-201ENST00000465655 MTMR4Q9NYA4 1195 aa0.94□□□□□ -2.26
RPL39P28-201ENST00000465655 NKIRAS2Q9NYR9 191 aa0.94□□□□□ -2.26
RPL39P28-201ENST00000465655 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP0.94□□□□□ -2.26
RPL39P28-201ENST00000465655 SMARCAL1Q9NZC9 954 aa0.94□□□□□ -2.26
RPL39P28-201ENST00000465655 GPRC5BQ9NZH0 403 aa0.94□□□□□ -2.26
RPL39P28-201ENST00000465655 TRPM5Q9NZQ8 1165 aa0.94□□□□□ -2.26
RPL39P28-201ENST00000465655 CABP1Q9NZU7 370 aa0.94□□□□□ -2.26
RPL39P28-201ENST00000465655 NDUFA13Q9P0J0 144 aa0.94□□□□□ -2.26
RPL39P28-201ENST00000465655 ACTR3BQ9P1U1 418 aa0.94□□□□□ -2.26
RPL39P28-201ENST00000465655 ZSWIM5Q9P217 1185 aa0.94□□□□□ -2.26
RPL39P28-201ENST00000465655 PCDH10Q9P2E7 1040 aa0.94□□□□□ -2.26
RPL39P28-201ENST00000465655 THEGQ9P2T0 379 aa0.94□□□□□ -2.26
RPL39P28-201ENST00000465655 PSMC3IPQ9P2W1 217 aaPredicted RBP0.94□□□□□ -2.26
RPL39P28-201ENST00000465655 STX18Q9P2W9 335 aaKnown RBP0.94□□□□□ -2.26
RPL39P28-201ENST00000465655 PI4KBQ9UBF8 816 aa0.94□□□□□ -2.26
RPL39P28-201ENST00000465655 SPASTQ9UBP0 616 aa0.94□□□□□ -2.26
RPL39P28-201ENST00000465655 GRHPRQ9UBQ7 328 aa0.94□□□□□ -2.26
RPL39P28-201ENST00000465655 SUCOQ9UBS9 1254 aaKnown RBP0.94□□□□□ -2.26
RPL39P28-201ENST00000465655 UBA2Q9UBT2 640 aaPredicted RBP0.94□□□□□ -2.26
RPL39P28-201ENST00000465655 DBF4Q9UBU7 674 aaPredicted RBP0.94□□□□□ -2.26
RPL39P28-201ENST00000465655 AASSQ9UDR5 926 aa0.94□□□□□ -2.26
Retrieved 100 of 20,778 RNA–protein pairs in 24 ms