RNA–Protein interactions for RNA: ENST00000464764.5

CLCNKA-204, Transcript of chloride voltage-gated channel Ka, humanhuman

TSL 2

Gene CLCNKA, Length 3,060 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLCNKA-204ENST00000464764 SH3PXD2AQ5TCZ1 1133 aa13.11□□□□□ -0.31
CLCNKA-204ENST00000464764 DENND5BQ6ZUT9 1274 aa13.11□□□□□ -0.31
CLCNKA-204ENST00000464764 NUDCD3Q8IVD9 361 aa13.11□□□□□ -0.31
CLCNKA-204ENST00000464764 DRAXINQ8NBI3 349 aaPredicted RBP13.11□□□□□ -0.31
CLCNKA-204ENST00000464764 KCTD6Q8NC69 237 aa13.11□□□□□ -0.31
CLCNKA-204ENST00000464764 SLC26A7Q8TE54 656 aa13.11□□□□□ -0.31
CLCNKA-204ENST00000464764 APOL6Q9BWW8 343 aa13.11□□□□□ -0.31
CLCNKA-204ENST00000464764 TMEM39BQ9GZU3 492 aa13.11□□□□□ -0.31
CLCNKA-204ENST00000464764 CYP4F11Q9HBI6 524 aa13.11□□□□□ -0.31
CLCNKA-204ENST00000464764 DMAP1Q9NPF5 467 aaPredicted RBP13.11□□□□□ -0.31
CLCNKA-204ENST00000464764 STK32BQ9NY57 414 aa13.11□□□□□ -0.31
CLCNKA-204ENST00000464764 KCNK4Q9NYG8 393 aa13.11□□□□□ -0.31
CLCNKA-204ENST00000464764 FBXO40Q9UH90 709 aa13.11□□□□□ -0.31
CLCNKA-204ENST00000464764 PACSIN3Q9UKS6 424 aa13.11□□□□□ -0.31
CLCNKA-204ENST00000464764 TEX264Q9Y6I9 313 aa13.11□□□□□ -0.31
CLCNKA-204ENST00000464764 ENTPD3O75355 529 aa13.11□□□□□ -0.31
CLCNKA-204ENST00000464764 TNFSF9P41273 254 aa13.11□□□□□ -0.31
CLCNKA-204ENST00000464764 AQP4P55087 323 aa13.11□□□□□ -0.31
CLCNKA-204ENST00000464764 MYL6P60660 151 aa13.11□□□□□ -0.31
CLCNKA-204ENST00000464764 PIGHQ14442 188 aaPredicted RBP13.11□□□□□ -0.31
CLCNKA-204ENST00000464764 VPS72Q15906 364 aa13.11□□□□□ -0.31
CLCNKA-204ENST00000464764 TRMT5Q32P41 509 aaKnown RBP13.11□□□□□ -0.31
CLCNKA-204ENST00000464764 MROH9Q5TGP6 573 aa13.11□□□□□ -0.31
CLCNKA-204ENST00000464764 C16orf46Q6P387 395 aa13.11□□□□□ -0.31
CLCNKA-204ENST00000464764 DENND1BQ6P3S1 775 aa13.11□□□□□ -0.31
CLCNKA-204ENST00000464764 SATL1Q86VE3 508 aa13.11□□□□□ -0.31
CLCNKA-204ENST00000464764 NMD3Q96D46 503 aaKnown RBP13.11□□□□□ -0.31
CLCNKA-204ENST00000464764 FAM192AQ9GZU8 254 aa13.11□□□□□ -0.31
CLCNKA-204ENST00000464764 PLAC1Q9HBJ0 212 aa13.11□□□□□ -0.31
CLCNKA-204ENST00000464764 ARHGAP28Q9P2N2 729 aa13.11□□□□□ -0.31
CLCNKA-204ENST00000464764 FEM1BQ9UK73 627 aa13.11□□□□□ -0.31
CLCNKA-204ENST00000464764 PCDHA10Q9Y5I2 948 aa13.11□□□□□ -0.31
CLCNKA-204ENST00000464764 PIK3R2O00459 728 aa13.1□□□□□ -0.31
CLCNKA-204ENST00000464764 CALB1P05937 261 aa13.1□□□□□ -0.31
CLCNKA-204ENST00000464764 CPOXP36551 454 aa13.1□□□□□ -0.31
CLCNKA-204ENST00000464764 GMPRP36959 345 aa13.1□□□□□ -0.31
CLCNKA-204ENST00000464764 CDK7P50613 346 aa13.1□□□□□ -0.31
CLCNKA-204ENST00000464764 MSLNQ13421 630 aaPredicted RBP13.1□□□□□ -0.31
CLCNKA-204ENST00000464764 PTPN20Q4JDL3 420 aa13.1□□□□□ -0.31
CLCNKA-204ENST00000464764 DARS2Q6PI48 645 aaKnown RBP13.1□□□□□ -0.31
CLCNKA-204ENST00000464764 C1orf228Q6PIY5 440 aa13.1□□□□□ -0.31
CLCNKA-204ENST00000464764 BBS12Q6ZW61 710 aa13.1□□□□□ -0.31
CLCNKA-204ENST00000464764 CCDC33Q8N5R6 958 aa13.1□□□□□ -0.31
CLCNKA-204ENST00000464764 MSTO1Q9BUK6 570 aa13.1□□□□□ -0.31
CLCNKA-204ENST00000464764 MRIQ9BWK5 157 aa13.1□□□□□ -0.31
CLCNKA-204ENST00000464764 TMX4Q9H1E5 349 aaPredicted RBP13.1□□□□□ -0.31
CLCNKA-204ENST00000464764 ETNK2Q9NVF9 386 aa13.1□□□□□ -0.31
CLCNKA-204ENST00000464764 DDX56Q9NY93 547 aaKnown RBP13.1□□□□□ -0.31
CLCNKA-204ENST00000464764 CLIC5Q9NZA1 410 aa13.1□□□□□ -0.31
CLCNKA-204ENST00000464764 QSER1Q2KHR3 1735 aa13.1□□□□□ -0.31
CLCNKA-204ENST00000464764 SCN9AQ15858 1988 aa13.1□□□□□ -0.31
CLCNKA-204ENST00000464764 LRRIQ4A6NIV6 560 aa13.1□□□□□ -0.31
CLCNKA-204ENST00000464764 ITM2AO43736 263 aa13.1□□□□□ -0.31
CLCNKA-204ENST00000464764 RFPL1O75677 317 aa13.1□□□□□ -0.31
CLCNKA-204ENST00000464764 ZMPSTE24O75844 475 aa13.1□□□□□ -0.31
CLCNKA-204ENST00000464764 PGM3O95394 542 aa13.1□□□□□ -0.31
CLCNKA-204ENST00000464764 C1QAP02745 245 aa13.1□□□□□ -0.31
CLCNKA-204ENST00000464764 KRT3P12035 628 aa13.1□□□□□ -0.31
CLCNKA-204ENST00000464764 NPR1P16066 1061 aa13.1□□□□□ -0.31
CLCNKA-204ENST00000464764 PEX2P28328 305 aa13.1□□□□□ -0.31
CLCNKA-204ENST00000464764 ASPHQ12797 758 aa13.1□□□□□ -0.31
CLCNKA-204ENST00000464764 C6orf163Q5TEZ5 329 aa13.1□□□□□ -0.31
CLCNKA-204ENST00000464764 TRMT10BQ6PF06 316 aaKnown RBP13.1□□□□□ -0.31
CLCNKA-204ENST00000464764 RSPH3Q86UC2 560 aa13.1□□□□□ -0.31
CLCNKA-204ENST00000464764 FAM160B2Q86V87 743 aa13.1□□□□□ -0.31
CLCNKA-204ENST00000464764 CCDC60Q8IWA6 550 aaPredicted RBP13.1□□□□□ -0.31
CLCNKA-204ENST00000464764 FAF2Q96CS3 445 aa13.1□□□□□ -0.31
CLCNKA-204ENST00000464764 RAB6BQ9NRW1 208 aa13.1□□□□□ -0.31
CLCNKA-204ENST00000464764 hCG_2014768A0A024R1R8 64 aa13.09□□□□□ -0.31
CLCNKA-204ENST00000464764 LOC100653049A0A140TA62 436 aa13.09□□□□□ -0.31
CLCNKA-204ENST00000464764 TXNDC9O14530 226 aa13.09□□□□□ -0.31
CLCNKA-204ENST00000464764 KRT34O76011 436 aa13.09□□□□□ -0.31
CLCNKA-204ENST00000464764 STIP1P31948 543 aaKnown RBP13.09□□□□□ -0.31
CLCNKA-204ENST00000464764 PDCD2Q16342 344 aaPredicted RBP13.09□□□□□ -0.31
CLCNKA-204ENST00000464764 TEX44Q53QW1 395 aa13.09□□□□□ -0.31
CLCNKA-204ENST00000464764 ATG14Q6ZNE5 492 aa13.09□□□□□ -0.31
CLCNKA-204ENST00000464764 SLC26A11Q86WA9 606 aa13.09□□□□□ -0.31
CLCNKA-204ENST00000464764 TTLL6Q8N841 843 aa13.09□□□□□ -0.31
CLCNKA-204ENST00000464764 TMEM35BQ8NCS4 154 aa13.09□□□□□ -0.31
CLCNKA-204ENST00000464764 OR6Y1Q8NGX8 325 aa13.09□□□□□ -0.31
CLCNKA-204ENST00000464764 PDCD2LQ9BRP1 358 aa13.09□□□□□ -0.31
CLCNKA-204ENST00000464764 ZNF341Q9BYN7 854 aa13.09□□□□□ -0.31
CLCNKA-204ENST00000464764 S100A14Q9HCY8 104 aa13.09□□□□□ -0.31
CLCNKA-204ENST00000464764 CISHQ9NSE2 258 aa13.09□□□□□ -0.31
CLCNKA-204ENST00000464764 SLC17A6Q9P2U8 582 aa13.09□□□□□ -0.31
CLCNKA-204ENST00000464764 TTLL3Q9Y4R7 772 aa13.09□□□□□ -0.31
CLCNKA-204ENST00000464764 TOM1L1O75674 476 aa13.09□□□□□ -0.31
CLCNKA-204ENST00000464764 STAM2O75886 525 aa13.09□□□□□ -0.31
CLCNKA-204ENST00000464764 PTPN7P35236 360 aa13.09□□□□□ -0.31
CLCNKA-204ENST00000464764 JAK3P52333 1124 aa13.09□□□□□ -0.31
CLCNKA-204ENST00000464764 ZNF132P52740 706 aa13.09□□□□□ -0.31
CLCNKA-204ENST00000464764 TTC39BQ5VTQ0 682 aaPredicted RBP13.09□□□□□ -0.31
CLCNKA-204ENST00000464764 ARHGEF16Q5VV41 709 aa13.09□□□□□ -0.31
CLCNKA-204ENST00000464764 NIPA1Q7RTP0 329 aa13.09□□□□□ -0.31
CLCNKA-204ENST00000464764 POLNQ7Z5Q5 900 aa13.09□□□□□ -0.31
CLCNKA-204ENST00000464764 ZBTB33Q86T24 672 aa13.09□□□□□ -0.31
CLCNKA-204ENST00000464764 NDUFAF2Q8N183 169 aa13.09□□□□□ -0.31
CLCNKA-204ENST00000464764 PPP2R3CQ969Q6 453 aa13.09□□□□□ -0.31
CLCNKA-204ENST00000464764 DNAJC1Q96KC8 554 aaKnown RBP13.09□□□□□ -0.31
CLCNKA-204ENST00000464764 MTMR12Q9C0I1 747 aa13.09□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 28.9 ms