RNA–Protein interactions for RNA: ENST00000464572.5

SUPT20H-204, Transcript of SPT20 homolog, SAGA complex component, humanhuman

TSL 1 (best)

Gene SUPT20H, Length 2,948 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SUPT20H-204ENST00000464572 SLC6A3Q01959 620 aa13.42□□□□□ -0.26
SUPT20H-204ENST00000464572 TWF1Q12792 350 aa13.42□□□□□ -0.26
SUPT20H-204ENST00000464572 OLFML1Q6UWY5 402 aa13.42□□□□□ -0.26
SUPT20H-204ENST00000464572 ZNF662Q6ZS27 426 aa13.42□□□□□ -0.26
SUPT20H-204ENST00000464572 ZDHHC17Q8IUH5 632 aa13.42□□□□□ -0.26
SUPT20H-204ENST00000464572 SELENOOQ9BVL4 669 aa13.42□□□□□ -0.26
SUPT20H-204ENST00000464572 TTYH1Q9H313 450 aaPredicted RBP13.42□□□□□ -0.26
SUPT20H-204ENST00000464572 CNGB3Q9NQW8 809 aa13.42□□□□□ -0.26
SUPT20H-204ENST00000464572 KCND1Q9NSA2 647 aa13.42□□□□□ -0.26
SUPT20H-204ENST00000464572 COG5Q9UP83 839 aa13.42□□□□□ -0.26
SUPT20H-204ENST00000464572 USP3Q9Y6I4 520 aa13.42□□□□□ -0.26
SUPT20H-204ENST00000464572 NCANO14594 1321 aa13.42□□□□□ -0.26
SUPT20H-204ENST00000464572 GRAP2O75791 330 aa13.42□□□□□ -0.26
SUPT20H-204ENST00000464572 C8AP07357 584 aa13.42□□□□□ -0.26
SUPT20H-204ENST00000464572 MSNP26038 577 aaKnown RBP13.42□□□□□ -0.26
SUPT20H-204ENST00000464572 NRIP1P48552 1158 aa13.42□□□□□ -0.26
SUPT20H-204ENST00000464572 GSCP56915 257 aaPredicted RBP13.42□□□□□ -0.26
SUPT20H-204ENST00000464572 RNASE9P60153 205 aaKnown RBP13.42□□□□□ -0.26
SUPT20H-204ENST00000464572 USP46P62068 366 aa13.42□□□□□ -0.26
SUPT20H-204ENST00000464572 MRPS5P82675 430 aaKnown RBP13.42□□□□□ -0.26
SUPT20H-204ENST00000464572 TAF5Q15542 800 aa13.42□□□□□ -0.26
SUPT20H-204ENST00000464572 CCDC149Q6ZUS6 474 aa13.42□□□□□ -0.26
SUPT20H-204ENST00000464572 RHOT2Q8IXI1 618 aa13.42□□□□□ -0.26
SUPT20H-204ENST00000464572 PRDM12Q9H4Q4 367 aa13.42□□□□□ -0.26
SUPT20H-204ENST00000464572 MRPL47Q9HD33 250 aaKnown RBP13.42□□□□□ -0.26
SUPT20H-204ENST00000464572 SCINQ9Y6U3 715 aa13.42□□□□□ -0.26
SUPT20H-204ENST00000464572 COL4A4P53420 1690 aaPredicted RBP13.41□□□□□ -0.26
SUPT20H-204ENST00000464572 SOX1O00570 391 aaPredicted RBP13.41□□□□□ -0.26
SUPT20H-204ENST00000464572 FBXO21O94952 628 aa13.41□□□□□ -0.26
SUPT20H-204ENST00000464572 KRT3P12035 628 aa13.41□□□□□ -0.26
SUPT20H-204ENST00000464572 DAOAP59103 153 aa13.41□□□□□ -0.26
SUPT20H-204ENST00000464572 RPL7AP62424 266 aaKnown RBP13.41□□□□□ -0.26
SUPT20H-204ENST00000464572 ZNF564Q8TBZ8 553 aaPredicted RBP13.41□□□□□ -0.26
SUPT20H-204ENST00000464572 MAN1C1Q9NR34 630 aa13.41□□□□□ -0.26
SUPT20H-204ENST00000464572 METTL5Q9NRN9 209 aaKnown RBP13.41□□□□□ -0.26
SUPT20H-204ENST00000464572 UVRAGQ9P2Y5 699 aa13.41□□□□□ -0.26
SUPT20H-204ENST00000464572 MAGED2Q9UNF1 606 aaPredicted RBP13.41□□□□□ -0.26
SUPT20H-204ENST00000464572 HCFC2Q9Y5Z7 792 aa13.41□□□□□ -0.26
SUPT20H-204ENST00000464572 ATG2AQ2TAZ0 1938 aa13.41□□□□□ -0.26
SUPT20H-204ENST00000464572 A0A0A6YYK5 440 aaPredicted RBP13.41□□□□□ -0.26
SUPT20H-204ENST00000464572 SIGLEC16A6NMB1 481 aa13.41□□□□□ -0.26
SUPT20H-204ENST00000464572 SLC38A8A6NNN8 435 aa13.41□□□□□ -0.26
SUPT20H-204ENST00000464572 BTNL10A8MVZ5 291 aa13.41□□□□□ -0.26
SUPT20H-204ENST00000464572 DCUN1D2Q6PH85 259 aa13.41□□□□□ -0.26
SUPT20H-204ENST00000464572 SLC22A17Q8WUG5 538 aa13.41□□□□□ -0.26
SUPT20H-204ENST00000464572 FAM149B1Q96BN6 582 aa13.41□□□□□ -0.26
SUPT20H-204ENST00000464572 MCEEQ96PE7 176 aa13.41□□□□□ -0.26
SUPT20H-204ENST00000464572 IRX2Q9BZI1 471 aaPredicted RBP13.41□□□□□ -0.26
SUPT20H-204ENST00000464572 TRIM7Q9C029 511 aa13.41□□□□□ -0.26
SUPT20H-204ENST00000464572 FBXO44Q9H4M3 255 aa13.41□□□□□ -0.26
SUPT20H-204ENST00000464572 PATJQ8NI35 1801 aa13.41□□□□□ -0.26
SUPT20H-204ENST00000464572 GOLGA6L9A6NEM1 432 aa13.4□□□□□ -0.26
SUPT20H-204ENST00000464572 RTN3O95197 1032 aaPredicted RBP13.4□□□□□ -0.26
SUPT20H-204ENST00000464572 YWHAQP27348 245 aa13.4□□□□□ -0.26
SUPT20H-204ENST00000464572 EPHB3P54753 998 aa13.4□□□□□ -0.26
SUPT20H-204ENST00000464572 GRIN2CQ14957 1233 aa13.4□□□□□ -0.26
SUPT20H-204ENST00000464572 VEPH1Q14D04 833 aa13.4□□□□□ -0.26
SUPT20H-204ENST00000464572 DUSP6Q16828 381 aa13.4□□□□□ -0.26
SUPT20H-204ENST00000464572 PM20D1Q6GTS8 502 aa13.4□□□□□ -0.26
SUPT20H-204ENST00000464572 JOSD2Q8TAC2 188 aa13.4□□□□□ -0.26
SUPT20H-204ENST00000464572 FEZF2Q8TBJ5 459 aa13.4□□□□□ -0.26
SUPT20H-204ENST00000464572 KHSRPQ92945 711 aaKnown RBP eCLIP13.4□□□□□ -0.266e-8■□□□□ 10.2
SUPT20H-204ENST00000464572 LRCH3Q96II8 777 aa13.4□□□□□ -0.26
SUPT20H-204ENST00000464572 CEP295NLQ96MC4 621 aa13.4□□□□□ -0.26
SUPT20H-204ENST00000464572 PLEKHA4Q9H4M7 779 aa13.4□□□□□ -0.26
SUPT20H-204ENST00000464572 TMEM265A0A087WTH1 108 aa13.4□□□□□ -0.26
SUPT20H-204ENST00000464572 YJEFN3A6XGL0 299 aa13.4□□□□□ -0.26
SUPT20H-204ENST00000464572 E7ENQ6 273 aa13.4□□□□□ -0.26
SUPT20H-204ENST00000464572 MOCS3O95396 460 aa13.4□□□□□ -0.26
SUPT20H-204ENST00000464572 C1RP00736 705 aa13.4□□□□□ -0.26
SUPT20H-204ENST00000464572 LRG1P02750 347 aa13.4□□□□□ -0.26
SUPT20H-204ENST00000464572 RFC1P35251 1148 aaPredicted RBP13.4□□□□□ -0.26
SUPT20H-204ENST00000464572 GTF2F1P35269 517 aaKnown RBP eCLIP13.4□□□□□ -0.26
SUPT20H-204ENST00000464572 RBM10P98175 930 aaKnown RBP13.4□□□□□ -0.26
SUPT20H-204ENST00000464572 TAF12Q16514 161 aa13.4□□□□□ -0.26
SUPT20H-204ENST00000464572 EFHC1Q5JVL4 640 aa13.4□□□□□ -0.26
SUPT20H-204ENST00000464572 PPP1R15BQ5SWA1 713 aa13.4□□□□□ -0.26
SUPT20H-204ENST00000464572 HFE2Q6ZVN8 426 aa13.4□□□□□ -0.26
SUPT20H-204ENST00000464572 SLC26A9Q7LBE3 791 aa13.4□□□□□ -0.26
SUPT20H-204ENST00000464572 EMC1Q8N766 993 aa13.4□□□□□ -0.26
SUPT20H-204ENST00000464572 BTBD6Q96KE9 485 aa13.4□□□□□ -0.26
SUPT20H-204ENST00000464572 IL37Q9NZH6 218 aa13.4□□□□□ -0.26
SUPT20H-204ENST00000464572 ANAPC7Q9UJX3 599 aa13.4□□□□□ -0.26
SUPT20H-204ENST00000464572 CSH1P0DML2 217 aa13.4□□□□□ -0.27
SUPT20H-204ENST00000464572 CSH2P0DML3 217 aa13.4□□□□□ -0.27
SUPT20H-204ENST00000464572 TCEAL1Q15170 157 aa13.4□□□□□ -0.27
SUPT20H-204ENST00000464572 PPM1LQ5SGD2 360 aa13.4□□□□□ -0.27
SUPT20H-204ENST00000464572 FBXO32Q969P5 355 aa13.4□□□□□ -0.27
SUPT20H-204ENST00000464572 PPP2R3CQ969Q6 453 aa13.4□□□□□ -0.27
SUPT20H-204ENST00000464572 IGFLR1Q9H665 355 aa13.4□□□□□ -0.27
SUPT20H-204ENST00000464572 TMEM59LQ9UK28 342 aa13.4□□□□□ -0.27
SUPT20H-204ENST00000464572 SCML2Q9UQR0 700 aa13.4□□□□□ -0.27
SUPT20H-204ENST00000464572 TMEM191CA6NGB0 347 aa13.39□□□□□ -0.27
SUPT20H-204ENST00000464572 SART1O43290 800 aaKnown RBP13.39□□□□□ -0.27
SUPT20H-204ENST00000464572 RFPL2O75678 378 aa13.39□□□□□ -0.27
SUPT20H-204ENST00000464572 YWHAZP63104 245 aaKnown RBP13.39□□□□□ -0.27
SUPT20H-204ENST00000464572 TAF10Q12962 218 aa13.39□□□□□ -0.27
SUPT20H-204ENST00000464572 PLD1Q13393 1074 aa13.39□□□□□ -0.27
SUPT20H-204ENST00000464572 BHLHA9Q7RTU4 235 aa13.39□□□□□ -0.27
SUPT20H-204ENST00000464572 DNAJB7Q7Z6W7 309 aaPredicted RBP13.39□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 16.6 ms