RNA–Protein interactions for RNA: ENST00000463526.1

CMSS1-202, Transcript of cms1 ribosomal small subunit homolog (yeast), humanhuman

TSL 3

Gene CMSS1, Length 397 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CMSS1-202ENST00000463526 NUP93Q8N1F7 819 aa16.28■□□□□ 0.2
CMSS1-202ENST00000463526 IQUBQ8NA54 791 aa16.28■□□□□ 0.2
CMSS1-202ENST00000463526 IL17RCQ8NAC3 791 aa16.28■□□□□ 0.2
CMSS1-202ENST00000463526 B3GALNT2Q8NCR0 500 aa16.28■□□□□ 0.2
CMSS1-202ENST00000463526 SCFD1Q8WVM8 642 aa16.28■□□□□ 0.2
CMSS1-202ENST00000463526 HMGB4Q8WW32 186 aa16.28■□□□□ 0.2
CMSS1-202ENST00000463526 KCNK16Q96T55 309 aa16.28■□□□□ 0.2
CMSS1-202ENST00000463526 CUEDC2Q9H467 287 aa16.28■□□□□ 0.2
CMSS1-202ENST00000463526 SMYD3Q9H7B4 428 aa16.28■□□□□ 0.2
CMSS1-202ENST00000463526 SLC39A2Q9NP94 309 aa16.28■□□□□ 0.2
CMSS1-202ENST00000463526 TMEM9BQ9NQ34 198 aa16.28■□□□□ 0.2
CMSS1-202ENST00000463526 COCHO43405 550 aa16.27■□□□□ 0.2
CMSS1-202ENST00000463526 FAM163BP0C2L3 166 aa16.27■□□□□ 0.2
CMSS1-202ENST00000463526 IRF1P10914 325 aa16.27■□□□□ 0.2
CMSS1-202ENST00000463526 SPINK2P20155 84 aa16.27■□□□□ 0.2
CMSS1-202ENST00000463526 ZNF252P-AS1Q0IIN9 211 aa16.27■□□□□ 0.2
CMSS1-202ENST00000463526 FOXC1Q12948 553 aa16.27■□□□□ 0.2
CMSS1-202ENST00000463526 BIRC3Q13489 604 aa16.27■□□□□ 0.2
CMSS1-202ENST00000463526 SHC4Q6S5L8 630 aa16.27■□□□□ 0.2
CMSS1-202ENST00000463526 SCARA5Q6ZMJ2 495 aa16.27■□□□□ 0.2
CMSS1-202ENST00000463526 DDX42Q86XP3 938 aaKnown RBP eCLIP16.27■□□□□ 0.2
CMSS1-202ENST00000463526 SCAMP5Q8TAC9 235 aa16.27■□□□□ 0.2
CMSS1-202ENST00000463526 INTS4Q96HW7 963 aaKnown RBP16.27■□□□□ 0.2
CMSS1-202ENST00000463526 ZNF396Q96N95 335 aaPredicted RBP16.27■□□□□ 0.2
CMSS1-202ENST00000463526 C7orf25Q9BPX7 421 aa16.27■□□□□ 0.2
CMSS1-202ENST00000463526 GZF1Q9H116 711 aaPredicted RBP16.27■□□□□ 0.2
CMSS1-202ENST00000463526 POLMQ9NP87 494 aaPredicted RBP16.27■□□□□ 0.2
CMSS1-202ENST00000463526 SH3BP1Q9Y3L3 701 aa16.27■□□□□ 0.2
CMSS1-202ENST00000463526 TCRBV21S2A2A0A5A6 115 aa16.26■□□□□ 0.19
CMSS1-202ENST00000463526 TBC1D3BA6NDS4 549 aa16.26■□□□□ 0.19
CMSS1-202ENST00000463526 POLR2DO15514 142 aaKnown RBP16.26■□□□□ 0.19
CMSS1-202ENST00000463526 EXOC3O60645 756 aa16.26■□□□□ 0.19
CMSS1-202ENST00000463526 CUTAO60888 179 aa16.26■□□□□ 0.19
CMSS1-202ENST00000463526 PPP6R2O75170 966 aa16.26■□□□□ 0.19
CMSS1-202ENST00000463526 RTN3O95197 1032 aaPredicted RBP16.26■□□□□ 0.19
CMSS1-202ENST00000463526 GRIA2P42262 883 aa16.26■□□□□ 0.19
CMSS1-202ENST00000463526 AFMP43652 599 aa16.26■□□□□ 0.19
CMSS1-202ENST00000463526 EOGTQ5NDL2 527 aa16.26■□□□□ 0.19
CMSS1-202ENST00000463526 HECTD3Q5T447 861 aa16.26■□□□□ 0.19
CMSS1-202ENST00000463526 UNC13DQ70J99 1090 aa16.26■□□□□ 0.19
CMSS1-202ENST00000463526 LPCAT2Q7L5N7 544 aa16.26■□□□□ 0.19
CMSS1-202ENST00000463526 DEFB119Q8N690 84 aa16.26■□□□□ 0.19
CMSS1-202ENST00000463526 WHAMMQ8TF30 809 aa16.26■□□□□ 0.19
CMSS1-202ENST00000463526 WBP2Q969T9 261 aa16.26■□□□□ 0.19
CMSS1-202ENST00000463526 SYAP1Q96A49 352 aaPredicted RBP16.26■□□□□ 0.19
CMSS1-202ENST00000463526 ERLEC1Q96DZ1 483 aa16.26■□□□□ 0.19
CMSS1-202ENST00000463526 SPACA7Q96KW9 195 aa16.26■□□□□ 0.19
CMSS1-202ENST00000463526 XYLT2Q9H1B5 865 aa16.26■□□□□ 0.19
CMSS1-202ENST00000463526 CCSER2Q9H7U1 834 aa16.26■□□□□ 0.19
CMSS1-202ENST00000463526 TBC1D14Q9P2M4 693 aa16.26■□□□□ 0.19
CMSS1-202ENST00000463526 RALYQ9UKM9 306 aaKnown RBP16.26■□□□□ 0.19
CMSS1-202ENST00000463526 USP24Q9UPU5 2620 aa16.26■□□□□ 0.19
CMSS1-202ENST00000463526 THADAQ6YHU6 1953 aa16.26■□□□□ 0.19
CMSS1-202ENST00000463526 ATP8B3O60423 1300 aa16.25■□□□□ 0.19
CMSS1-202ENST00000463526 MYO16Q9Y6X6 1858 aa16.25■□□□□ 0.19
CMSS1-202ENST00000463526 GON4LQ3T8J9 2241 aa16.25■□□□□ 0.19
CMSS1-202ENST00000463526 E2F8A0AVK6 867 aa16.25■□□□□ 0.19
CMSS1-202ENST00000463526 CDX4O14627 284 aaPredicted RBP16.25■□□□□ 0.19
CMSS1-202ENST00000463526 ADAM23O75077 832 aa16.25■□□□□ 0.19
CMSS1-202ENST00000463526 ATICP31939 592 aa16.25■□□□□ 0.19
CMSS1-202ENST00000463526 P2RY2P41231 377 aa16.25■□□□□ 0.19
CMSS1-202ENST00000463526 WASP42768 502 aa16.25■□□□□ 0.19
CMSS1-202ENST00000463526 PTGER3P43115 390 aa16.25■□□□□ 0.19
CMSS1-202ENST00000463526 KIR2DL1P43626 348 aaPredicted RBP16.25■□□□□ 0.19
CMSS1-202ENST00000463526 MAPK8P45983 427 aa16.25■□□□□ 0.19
CMSS1-202ENST00000463526 GAD2Q05329 585 aa16.25■□□□□ 0.19
CMSS1-202ENST00000463526 ORC1Q13415 861 aa16.25■□□□□ 0.19
CMSS1-202ENST00000463526 ANO4Q32M45 955 aa16.25■□□□□ 0.19
CMSS1-202ENST00000463526 ZNF699Q32M78 642 aa16.25■□□□□ 0.19
CMSS1-202ENST00000463526 TRIM61Q5EBN2 209 aa16.25■□□□□ 0.19
CMSS1-202ENST00000463526 BTBD8Q5XKL5 378 aa16.25■□□□□ 0.19
CMSS1-202ENST00000463526 FAM35AQ86V20 835 aa16.25■□□□□ 0.19
CMSS1-202ENST00000463526 BBS7Q8IWZ6 715 aa16.25■□□□□ 0.19
CMSS1-202ENST00000463526 PDZD8Q8NEN9 1154 aa16.25■□□□□ 0.19
CMSS1-202ENST00000463526 OLIG1Q8TAK6 271 aa16.25■□□□□ 0.19
CMSS1-202ENST00000463526 PLEKHO2Q8TD55 490 aa16.25■□□□□ 0.19
CMSS1-202ENST00000463526 NACA2Q9H009 215 aa16.25■□□□□ 0.19
CMSS1-202ENST00000463526 GMIPQ9P107 970 aa16.25■□□□□ 0.19
CMSS1-202ENST00000463526 MBD1Q9UIS9 605 aaPredicted RBP16.25■□□□□ 0.19
CMSS1-202ENST00000463526 MYOFQ9NZM1 2061 aa16.25■□□□□ 0.19
CMSS1-202ENST00000463526 UBE4BO95155 1302 aa16.24■□□□□ 0.19
CMSS1-202ENST00000463526 ATXN2Q99700 1313 aaKnown RBP16.24■□□□□ 0.19
CMSS1-202ENST00000463526 PALM2-AKAP2B1ALY0 433 aaPredicted RBP16.24■□□□□ 0.19
CMSS1-202ENST00000463526 C1QTNF9BB2RNN3 333 aa16.24■□□□□ 0.19
CMSS1-202ENST00000463526 TRIM24O15164 1050 aa16.24■□□□□ 0.19
CMSS1-202ENST00000463526 AP1G2O75843 785 aa16.24■□□□□ 0.19
CMSS1-202ENST00000463526 STAU1O95793 577 aaKnown RBP16.24■□□□□ 0.19
CMSS1-202ENST00000463526 TOP3BO95985 862 aaKnown RBP16.24■□□□□ 0.19
CMSS1-202ENST00000463526 C1QTNF9P0C862 333 aa16.24■□□□□ 0.19
CMSS1-202ENST00000463526 CHRM1P11229 460 aaPredicted RBP16.24■□□□□ 0.19
CMSS1-202ENST00000463526 EIF2DP41214 584 aaKnown RBP16.24■□□□□ 0.19
CMSS1-202ENST00000463526 TNFRSF4P43489 277 aa16.24■□□□□ 0.19
CMSS1-202ENST00000463526 SLC5A3P53794 718 aa16.24■□□□□ 0.19
CMSS1-202ENST00000463526 SNRPFP62306 86 aaKnown RBP16.24■□□□□ 0.19
CMSS1-202ENST00000463526 CUL4BQ13620 913 aa16.24■□□□□ 0.19
CMSS1-202ENST00000463526 ZNF667Q5HYK9 610 aa16.24■□□□□ 0.19
CMSS1-202ENST00000463526 CNNM4Q6P4Q7 775 aa16.24■□□□□ 0.19
CMSS1-202ENST00000463526 PAQR9Q6ZVX9 377 aa16.24■□□□□ 0.19
CMSS1-202ENST00000463526 ACOT1Q86TX2 421 aa16.24■□□□□ 0.19
CMSS1-202ENST00000463526 GRAMD1CQ8IYS0 662 aa16.24■□□□□ 0.19
Retrieved 100 of 20,778 RNA–protein pairs in 28.1 ms