RNA–Protein interactions for RNA: ENST00000463486.5

VPS52-214, Transcript of VPS52, GARP complex subunit, humanhuman

TSL 5

Gene VPS52, Length 925 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS52-214ENST00000463486 NAT10Q9H0A0 1025 aaKnown RBP18.67■□□□□ 0.58
VPS52-214ENST00000463486 FBXO44Q9H4M3 255 aa18.67■□□□□ 0.58
VPS52-214ENST00000463486 NMUR1Q9HB89 426 aa18.67■□□□□ 0.58
VPS52-214ENST00000463486 TRPC7Q9HCX4 862 aa18.67■□□□□ 0.58
VPS52-214ENST00000463486 TRPV5Q9NQA5 729 aa18.67■□□□□ 0.58
VPS52-214ENST00000463486 SIK3Q9Y2K2 1263 aa18.67■□□□□ 0.58
VPS52-214ENST00000463486 MYH10P35580 1976 aa18.67■□□□□ 0.58
VPS52-214ENST00000463486 KIF26AQ9ULI4 1882 aaPredicted RBP18.67■□□□□ 0.58
VPS52-214ENST00000463486 TRAV19A0A0A6YYK7 116 aa18.66■□□□□ 0.58
VPS52-214ENST00000463486 FOXN3O00409 490 aaPredicted RBP18.66■□□□□ 0.58
VPS52-214ENST00000463486 XPO1O14980 1071 aaKnown RBP18.66■□□□□ 0.58
VPS52-214ENST00000463486 CHADO15335 359 aa18.66■□□□□ 0.58
VPS52-214ENST00000463486 CYP26A1O43174 497 aa18.66■□□□□ 0.58
VPS52-214ENST00000463486 USP17L7P0C7H9 530 aa18.66■□□□□ 0.58
VPS52-214ENST00000463486 TCF3P15923 654 aa18.66■□□□□ 0.58
VPS52-214ENST00000463486 GDI1P31150 447 aa18.66■□□□□ 0.58
VPS52-214ENST00000463486 KLK7P49862 253 aa18.66■□□□□ 0.58
VPS52-214ENST00000463486 BCAT1P54687 386 aa18.66■□□□□ 0.58
VPS52-214ENST00000463486 SLC7A9P82251 487 aa18.66■□□□□ 0.58
VPS52-214ENST00000463486 ARHGAP44Q17R89 818 aa18.66■□□□□ 0.58
VPS52-214ENST00000463486 BHLHA9Q7RTU4 235 aa18.66■□□□□ 0.58
VPS52-214ENST00000463486 CCDC186Q7Z3E2 898 aa18.66■□□□□ 0.58
VPS52-214ENST00000463486 SIX5Q8N196 739 aa18.66■□□□□ 0.58
VPS52-214ENST00000463486 PBXIP1Q96AQ6 731 aa18.66■□□□□ 0.58
VPS52-214ENST00000463486 FAM83CQ9BQN1 747 aa18.66■□□□□ 0.58
VPS52-214ENST00000463486 GANQ9H2C0 597 aa18.66■□□□□ 0.58
VPS52-214ENST00000463486 PLCB1Q9NQ66 1216 aa18.66■□□□□ 0.58
VPS52-214ENST00000463486 ARHGAP26Q9UNA1 814 aa18.66■□□□□ 0.58
VPS52-214ENST00000463486 WDFY4Q6ZS81 3184 aa18.65■□□□□ 0.58
VPS52-214ENST00000463486 LGALS16A8MUM7 142 aa18.65■□□□□ 0.58
VPS52-214ENST00000463486 COCHO43405 550 aa18.65■□□□□ 0.58
VPS52-214ENST00000463486 PNMA6AP0CW24 399 aaPredicted RBP18.65■□□□□ 0.58
VPS52-214ENST00000463486 KRT5P13647 590 aa18.65■□□□□ 0.58
VPS52-214ENST00000463486 CLCN1P35523 988 aa18.65■□□□□ 0.58
VPS52-214ENST00000463486 PLA2G4AP47712 749 aa18.65■□□□□ 0.58
VPS52-214ENST00000463486 TUBP50607 506 aa18.65■□□□□ 0.58
VPS52-214ENST00000463486 BST2Q10589 180 aaKnown RBP18.65■□□□□ 0.58
VPS52-214ENST00000463486 NFKBIBQ15653 356 aa18.65■□□□□ 0.58
VPS52-214ENST00000463486 ZNF77Q15935 545 aa18.65■□□□□ 0.58
VPS52-214ENST00000463486 SLC44A4Q53GD3 710 aa18.65■□□□□ 0.58
VPS52-214ENST00000463486 PM20D1Q6GTS8 502 aa18.65■□□□□ 0.58
VPS52-214ENST00000463486 PMF1Q6P1K2 205 aa18.65■□□□□ 0.58
VPS52-214ENST00000463486 FAM71AQ8IYT1 594 aa18.65■□□□□ 0.58
VPS52-214ENST00000463486 BPIFB1Q8TDL5 484 aa18.65■□□□□ 0.58
VPS52-214ENST00000463486 ZNF606Q8WXB4 792 aa18.65■□□□□ 0.58
VPS52-214ENST00000463486 KCTD13Q8WZ19 329 aa18.65■□□□□ 0.58
VPS52-214ENST00000463486 ZFRQ96KR1 1074 aaKnown RBP18.65■□□□□ 0.58
VPS52-214ENST00000463486 DDX23Q9BUQ8 820 aaKnown RBP18.65■□□□□ 0.58
VPS52-214ENST00000463486 CCSER2Q9H7U1 834 aa18.65■□□□□ 0.58
VPS52-214ENST00000463486 KIF9Q9HAQ2 790 aa18.65■□□□□ 0.58
VPS52-214ENST00000463486 CA14Q9ULX7 337 aa18.65■□□□□ 0.58
VPS52-214ENST00000463486 FHOD1Q9Y613 1164 aa18.65■□□□□ 0.58
VPS52-214ENST00000463486 ZNF263O14978 683 aa18.64■□□□□ 0.57
VPS52-214ENST00000463486 EPHB6O15197 1021 aa18.64■□□□□ 0.57
VPS52-214ENST00000463486 CKMP06732 381 aa18.64■□□□□ 0.57
VPS52-214ENST00000463486 SETSIPP0DME0 302 aa18.64■□□□□ 0.57
VPS52-214ENST00000463486 UCHL3P15374 230 aa18.64■□□□□ 0.57
VPS52-214ENST00000463486 GPD2P43304 727 aa18.64■□□□□ 0.57
VPS52-214ENST00000463486 RPL34P49207 117 aaKnown RBP18.64■□□□□ 0.57
VPS52-214ENST00000463486 STARD6P59095 220 aa18.64■□□□□ 0.57
VPS52-214ENST00000463486 PFKPQ01813 784 aa18.64■□□□□ 0.57
VPS52-214ENST00000463486 USP4Q13107 963 aa18.64■□□□□ 0.57
VPS52-214ENST00000463486 STILQ15468 1287 aa18.64■□□□□ 0.57
VPS52-214ENST00000463486 HECTD3Q5T447 861 aa18.64■□□□□ 0.57
VPS52-214ENST00000463486 CWF19L1Q69YN2 538 aaKnown RBP18.64■□□□□ 0.57
VPS52-214ENST00000463486 FBXL6Q8N531 539 aa18.64■□□□□ 0.57
VPS52-214ENST00000463486 DNASE1L2Q92874 299 aa18.64■□□□□ 0.57
VPS52-214ENST00000463486 IRF7Q92985 503 aa18.64■□□□□ 0.57
VPS52-214ENST00000463486 ZFYVE19Q96K21 471 aa18.64■□□□□ 0.57
VPS52-214ENST00000463486 LSM14BQ9BX40 385 aaKnown RBP18.64■□□□□ 0.57
VPS52-214ENST00000463486 BRD9Q9H8M2 597 aa18.64■□□□□ 0.57
VPS52-214ENST00000463486 CBX8Q9HC52 389 aa18.64■□□□□ 0.57
VPS52-214ENST00000463486 CYLDQ9NQC7 956 aa18.64■□□□□ 0.57
VPS52-214ENST00000463486 ARHGEF3Q9NR81 526 aa18.64■□□□□ 0.57
VPS52-214ENST00000463486 HESX1Q9UBX0 185 aa18.64■□□□□ 0.57
VPS52-214ENST00000463486 FBXL21Q9UKT6 434 aa18.64■□□□□ 0.57
VPS52-214ENST00000463486 A0A1W2PQH9 124 aa18.63■□□□□ 0.57
VPS52-214ENST00000463486 SMTNL1A8MU46 457 aa18.63■□□□□ 0.57
VPS52-214ENST00000463486 PES1O00541 588 aaKnown RBP18.63■□□□□ 0.57
VPS52-214ENST00000463486 DPYSL4O14531 572 aa18.63■□□□□ 0.57
VPS52-214ENST00000463486 TBX18O95935 607 aa18.63■□□□□ 0.57
VPS52-214ENST00000463486 ABL1P00519 1130 aa18.63■□□□□ 0.57
VPS52-214ENST00000463486 MEA1Q16626 185 aa18.63■□□□□ 0.57
VPS52-214ENST00000463486 ARHGAP29Q52LW3 1261 aa18.63■□□□□ 0.57
VPS52-214ENST00000463486 DENND1BQ6P3S1 775 aa18.63■□□□□ 0.57
VPS52-214ENST00000463486 ZNF687Q8N1G0 1237 aa18.63■□□□□ 0.57
VPS52-214ENST00000463486 ZNF276Q8N554 614 aa18.63■□□□□ 0.57
VPS52-214ENST00000463486 SH3RF2Q8TEC5 729 aa18.63■□□□□ 0.57
VPS52-214ENST00000463486 SECISBP2LQ93073 1101 aaKnown RBP18.63■□□□□ 0.57
VPS52-214ENST00000463486 TLR8Q9NR97 1041 aaKnown RBP18.63■□□□□ 0.57
VPS52-214ENST00000463486 HEBP1Q9NRV9 189 aa18.63■□□□□ 0.57
VPS52-214ENST00000463486 GKN1Q9NS71 199 aa18.63■□□□□ 0.57
VPS52-214ENST00000463486 MTPAPQ9NVV4 582 aaKnown RBP eCLIP18.63■□□□□ 0.57
VPS52-214ENST00000463486 CYTH4Q9UIA0 394 aa18.63■□□□□ 0.57
VPS52-214ENST00000463486 MUC6Q6W4X9 2439 aa18.62■□□□□ 0.57
VPS52-214ENST00000463486 OTOL1A6NHN0 477 aaPredicted RBP18.62■□□□□ 0.57
VPS52-214ENST00000463486 PI15O43692 258 aa18.62■□□□□ 0.57
VPS52-214ENST00000463486 CDK11BP21127 795 aaKnown RBP18.62■□□□□ 0.57
VPS52-214ENST00000463486 GNA15P30679 374 aa18.62■□□□□ 0.57
VPS52-214ENST00000463486 PDE6CP51160 858 aa18.62■□□□□ 0.57
Retrieved 100 of 20,778 RNA–protein pairs in 30.7 ms