RNA–Protein interactions for RNA: ENST00000463004.5

RBM39-223, Transcript of RNA binding motif protein 39, humanhuman

TSL 5

Gene RBM39, Length 4,580 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RBM39-223ENST00000463004 NPR3P17342 541 aa12.23□□□□□ -0.45
RBM39-223ENST00000463004 YY1P25490 414 aa12.23□□□□□ -0.45
RBM39-223ENST00000463004 TNFRSF8P28908 595 aa12.23□□□□□ -0.45
RBM39-223ENST00000463004 SPRP35270 261 aaPredicted RBP12.23□□□□□ -0.45
RBM39-223ENST00000463004 ZNF143P52747 638 aaPredicted RBP12.23□□□□□ -0.45
RBM39-223ENST00000463004 HADHBP55084 474 aaKnown RBP12.23□□□□□ -0.45
RBM39-223ENST00000463004 ZNF200P98182 395 aaPredicted RBP12.23□□□□□ -0.45
RBM39-223ENST00000463004 FSTL1Q12841 308 aa12.23□□□□□ -0.45
RBM39-223ENST00000463004 ZC3H3Q8IXZ2 948 aaKnown RBP12.23□□□□□ -0.45
RBM39-223ENST00000463004 EMID1Q96A84 441 aaPredicted RBP12.23□□□□□ -0.45
RBM39-223ENST00000463004 DCLK3Q9C098 648 aa12.23□□□□□ -0.45
RBM39-223ENST00000463004 TTYH3Q9C0H2 523 aa12.23□□□□□ -0.45
RBM39-223ENST00000463004 KLHL11Q9NVR0 708 aa12.23□□□□□ -0.45
RBM39-223ENST00000463004 DRG1Q9Y295 367 aaKnown RBP12.23□□□□□ -0.45
RBM39-223ENST00000463004 GMNCA6NCL1 334 aa12.23□□□□□ -0.45
RBM39-223ENST00000463004 CNTFP26441 200 aa12.23□□□□□ -0.45
RBM39-223ENST00000463004 MAP3K7CLP57077 242 aa12.23□□□□□ -0.45
RBM39-223ENST00000463004 EP400NLQ6ZTU2 488 aa12.23□□□□□ -0.45
RBM39-223ENST00000463004 ANKS3Q6ZW76 656 aa12.23□□□□□ -0.45
RBM39-223ENST00000463004 YAF2Q8IY57 180 aa12.23□□□□□ -0.45
RBM39-223ENST00000463004 TMEM199Q8N511 208 aa12.23□□□□□ -0.45
RBM39-223ENST00000463004 PITPNM3Q9BZ71 974 aa12.23□□□□□ -0.45
RBM39-223ENST00000463004 ABCC13Q9NSE7 274 aa12.23□□□□□ -0.45
RBM39-223ENST00000463004 ATP11BQ9Y2G3 1177 aa12.23□□□□□ -0.45
RBM39-223ENST00000463004 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP12.22□□□□□ -0.45
RBM39-223ENST00000463004 TBKBP1A7MCY6 615 aa12.22□□□□□ -0.45
RBM39-223ENST00000463004 CSDE1O75534 798 aaKnown RBP12.22□□□□□ -0.45
RBM39-223ENST00000463004 FGFR4P22455 802 aa12.22□□□□□ -0.45
RBM39-223ENST00000463004 CARSP49589 748 aaKnown RBP12.22□□□□□ -0.45
RBM39-223ENST00000463004 HDAC4P56524 1084 aa12.22□□□□□ -0.45
RBM39-223ENST00000463004 ZNF177Q13360 481 aaPredicted RBP12.22□□□□□ -0.45
RBM39-223ENST00000463004 MAMDC4Q6UXC1 1216 aa12.22□□□□□ -0.45
RBM39-223ENST00000463004 RASSF3Q86WH2 238 aa12.22□□□□□ -0.45
RBM39-223ENST00000463004 OR5B17Q8NGF7 314 aa12.22□□□□□ -0.45
RBM39-223ENST00000463004 STK32AQ8WU08 396 aa12.22□□□□□ -0.45
RBM39-223ENST00000463004 RAPGEF5Q92565 580 aa12.22□□□□□ -0.45
RBM39-223ENST00000463004 VCX3BQ9H321 246 aa12.22□□□□□ -0.45
RBM39-223ENST00000463004 PDZD7Q9H5P4 517 aa12.22□□□□□ -0.45
RBM39-223ENST00000463004 DNAJC17Q9NVM6 304 aaKnown RBP12.22□□□□□ -0.45
RBM39-223ENST00000463004 RGS17Q9UGC6 210 aaPredicted RBP12.22□□□□□ -0.45
RBM39-223ENST00000463004 MAGEB16A2A368 324 aa12.22□□□□□ -0.45
RBM39-223ENST00000463004 PIK3R2O00459 728 aa12.22□□□□□ -0.45
RBM39-223ENST00000463004 TSPAN1O60635 241 aa12.22□□□□□ -0.45
RBM39-223ENST00000463004 DRG2P55039 364 aaKnown RBP12.22□□□□□ -0.45
RBM39-223ENST00000463004 JAM2P57087 298 aa12.22□□□□□ -0.45
RBM39-223ENST00000463004 ST8SIA6P61647 398 aa12.22□□□□□ -0.45
RBM39-223ENST00000463004 BIRC2Q13490 618 aa12.22□□□□□ -0.45
RBM39-223ENST00000463004 PABPC1LQ4VXU2 614 aaKnown RBP12.22□□□□□ -0.45
RBM39-223ENST00000463004 SLC51AQ86UW1 340 aa12.22□□□□□ -0.45
RBM39-223ENST00000463004 LNX1Q8TBB1 728 aaPredicted RBP12.22□□□□□ -0.45
RBM39-223ENST00000463004 HELQQ8TDG4 1101 aa12.22□□□□□ -0.45
RBM39-223ENST00000463004 YWHAQP27348 245 aa12.22□□□□□ -0.45
RBM39-223ENST00000463004 OTUD4Q01804 1114 aaKnown RBP12.22□□□□□ -0.45
RBM39-223ENST00000463004 TRADDQ15628 312 aa12.22□□□□□ -0.45
RBM39-223ENST00000463004 SLC2A14Q8TDB8 520 aa12.22□□□□□ -0.45
RBM39-223ENST00000463004 CRYGNQ8WXF5 182 aa12.22□□□□□ -0.45
RBM39-223ENST00000463004 HDAC11Q96DB2 347 aa12.22□□□□□ -0.45
RBM39-223ENST00000463004 MTBPQ96DY7 904 aa12.22□□□□□ -0.45
RBM39-223ENST00000463004 TSSK1BQ9BXA7 367 aa12.22□□□□□ -0.45
RBM39-223ENST00000463004 EMILIN2Q9BXX0 1053 aa12.22□□□□□ -0.45
RBM39-223ENST00000463004 NMRK2Q9NPI5 230 aa12.22□□□□□ -0.45
RBM39-223ENST00000463004 GOLGA8MH3BSY2 632 aa12.21□□□□□ -0.45
RBM39-223ENST00000463004 APOC4-APOC2K7ER74 178 aa12.21□□□□□ -0.45
RBM39-223ENST00000463004 OPHN1O60890 802 aa12.21□□□□□ -0.45
RBM39-223ENST00000463004 PPP1R37O75864 691 aa12.21□□□□□ -0.45
RBM39-223ENST00000463004 POMCP01189 267 aa12.21□□□□□ -0.45
RBM39-223ENST00000463004 APOC2P02655 101 aa12.21□□□□□ -0.45
RBM39-223ENST00000463004 LTFP02788 710 aa12.21□□□□□ -0.45
RBM39-223ENST00000463004 SNRPAP09012 282 aaKnown RBP12.21□□□□□ -0.45
RBM39-223ENST00000463004 COL6A1P12109 1028 aa12.21□□□□□ -0.45
RBM39-223ENST00000463004 SELPP16109 830 aa12.21□□□□□ -0.45
RBM39-223ENST00000463004 MRPS25P82663 173 aaKnown RBP12.21□□□□□ -0.45
RBM39-223ENST00000463004 CDK16Q00536 496 aa12.21□□□□□ -0.45
RBM39-223ENST00000463004 MAMLD1Q13495 774 aa12.21□□□□□ -0.45
RBM39-223ENST00000463004 CDCA2Q69YH5 1023 aaPredicted RBP12.21□□□□□ -0.45
RBM39-223ENST00000463004 LCLAT1Q6UWP7 414 aa12.21□□□□□ -0.45
RBM39-223ENST00000463004 CNGB3Q9NQW8 809 aa12.21□□□□□ -0.45
RBM39-223ENST00000463004 PSD3Q9NYI0 1048 aa12.21□□□□□ -0.45
RBM39-223ENST00000463004 LMCD1Q9NZU5 365 aa12.21□□□□□ -0.45
RBM39-223ENST00000463004 EPHB6O15197 1021 aa12.21□□□□□ -0.45
RBM39-223ENST00000463004 PQBP1O60828 265 aaKnown RBP12.21□□□□□ -0.45
RBM39-223ENST00000463004 TSHRP16473 764 aa12.21□□□□□ -0.45
RBM39-223ENST00000463004 TYK2P29597 1187 aa12.21□□□□□ -0.45
RBM39-223ENST00000463004 PTK6Q13882 451 aa12.21□□□□□ -0.45
RBM39-223ENST00000463004 SMTNL2Q2TAL5 461 aa12.21□□□□□ -0.45
RBM39-223ENST00000463004 FSCBQ5H9T9 825 aa12.21□□□□□ -0.45
RBM39-223ENST00000463004 SLC24A5Q71RS6 500 aa12.21□□□□□ -0.45
RBM39-223ENST00000463004 DAW1Q8N136 415 aa12.21□□□□□ -0.45
RBM39-223ENST00000463004 WNT8BQ93098 351 aa12.21□□□□□ -0.45
RBM39-223ENST00000463004 ASIC4Q96FT7 647 aa12.21□□□□□ -0.45
RBM39-223ENST00000463004 SLC24A2Q9UI40 661 aa12.21□□□□□ -0.45
RBM39-223ENST00000463004 DYNC1LI1Q9Y6G9 523 aaKnown RBP12.21□□□□□ -0.45
RBM39-223ENST00000463004 ARAP2Q8WZ64 1704 aa12.21□□□□□ -0.45
RBM39-223ENST00000463004 ERI2A8K979 691 aaKnown RBP12.21□□□□□ -0.45
RBM39-223ENST00000463004 XPO1O14980 1071 aaKnown RBP12.21□□□□□ -0.45
RBM39-223ENST00000463004 FGF10O15520 208 aaPredicted RBP12.21□□□□□ -0.45
RBM39-223ENST00000463004 AMHR2Q16671 573 aa12.21□□□□□ -0.45
RBM39-223ENST00000463004 C9orf57Q5W0N0 161 aa12.21□□□□□ -0.45
RBM39-223ENST00000463004 NUGGCQ68CJ6 796 aa12.21□□□□□ -0.45
RBM39-223ENST00000463004 B3GALNT2Q8NCR0 500 aa12.21□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 33.8 ms