RNA–Protein interactions for RNA: ENST00000462899.1

SMC3-202, Transcript of structural maintenance of chromosomes 3, humanhuman

TSL 5

Gene SMC3, Length 777 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC3-202ENST00000462899 SLC7A9P82251 487 aa8.28□□□□□ -1.08
SMC3-202ENST00000462899 ZNF33AQ06730 810 aa8.28□□□□□ -1.08
SMC3-202ENST00000462899 BYSLQ13895 437 aaKnown RBP8.28□□□□□ -1.08
SMC3-202ENST00000462899 NUMA1Q14980 2115 aa8.28□□□□□ -1.08
SMC3-202ENST00000462899 TMEM132DQ14C87 1099 aa8.28□□□□□ -1.08
SMC3-202ENST00000462899 DHCR24Q15392 516 aa8.28□□□□□ -1.08
SMC3-202ENST00000462899 NFE2Q16621 373 aaPredicted RBP8.28□□□□□ -1.08
SMC3-202ENST00000462899 TUSC1Q2TAM9 212 aa8.28□□□□□ -1.08
SMC3-202ENST00000462899 INTS6LQ5JSJ4 861 aaKnown RBP8.28□□□□□ -1.08
SMC3-202ENST00000462899 EOGTQ5NDL2 527 aa8.28□□□□□ -1.08
SMC3-202ENST00000462899 TTC38Q5R3I4 469 aa8.28□□□□□ -1.08
SMC3-202ENST00000462899 EMC10Q5UCC4 262 aa8.28□□□□□ -1.08
SMC3-202ENST00000462899 DBX2Q6ZNG2 339 aa8.28□□□□□ -1.08
SMC3-202ENST00000462899 ETFBKMTQ8IXQ9 262 aa8.28□□□□□ -1.08
SMC3-202ENST00000462899 THEM5Q8N1Q8 247 aa8.28□□□□□ -1.08
SMC3-202ENST00000462899 SYT2Q8N9I0 419 aaPredicted RBP8.28□□□□□ -1.08
SMC3-202ENST00000462899 HMGB4Q8WW32 186 aa8.28□□□□□ -1.08
SMC3-202ENST00000462899 PCMTD1Q96MG8 357 aaPredicted RBP8.28□□□□□ -1.08
SMC3-202ENST00000462899 PNMA5Q96PV4 448 aa8.28□□□□□ -1.08
SMC3-202ENST00000462899 ACBD6Q9BR61 282 aa8.28□□□□□ -1.08
SMC3-202ENST00000462899 PYM1Q9BRP8 204 aaKnown RBP8.28□□□□□ -1.08
SMC3-202ENST00000462899 FOXP1Q9H334 677 aaPredicted RBP8.28□□□□□ -1.08
SMC3-202ENST00000462899 ASB7Q9H672 318 aa8.28□□□□□ -1.08
SMC3-202ENST00000462899 TRPC7Q9HCX4 862 aa8.28□□□□□ -1.08
SMC3-202ENST00000462899 ZDHHC4Q9NPG8 344 aa8.28□□□□□ -1.08
SMC3-202ENST00000462899 KCNG1Q9UIX4 513 aa8.28□□□□□ -1.08
SMC3-202ENST00000462899 PCOLCE2Q9UKZ9 415 aa8.28□□□□□ -1.08
SMC3-202ENST00000462899 DNM3Q9UQ16 869 aa8.28□□□□□ -1.08
SMC3-202ENST00000462899 UBR5O95071 2799 aaPredicted RBP8.28□□□□□ -1.08
SMC3-202ENST00000462899 A0A1W2PQF6 199 aa8.27□□□□□ -1.09
SMC3-202ENST00000462899 KPNA7A9QM74 516 aa8.27□□□□□ -1.09
SMC3-202ENST00000462899 HNRNPDLO14979 420 aaKnown RBP8.27□□□□□ -1.09
SMC3-202ENST00000462899 SYPP08247 313 aa8.27□□□□□ -1.09
SMC3-202ENST00000462899 PLA2G2AP14555 144 aa8.27□□□□□ -1.09
SMC3-202ENST00000462899 SLC19A1P41440 591 aa8.27□□□□□ -1.09
SMC3-202ENST00000462899 TNFRSF4P43489 277 aa8.27□□□□□ -1.09
SMC3-202ENST00000462899 TRAPPC10P48553 1259 aa8.27□□□□□ -1.09
SMC3-202ENST00000462899 TOB1P50616 345 aaPredicted RBP8.27□□□□□ -1.09
SMC3-202ENST00000462899 ZNF131P52739 623 aa8.27□□□□□ -1.09
SMC3-202ENST00000462899 SMTNP53814 917 aa8.27□□□□□ -1.09
SMC3-202ENST00000462899 ATXN3P54252 364 aaPredicted RBP8.27□□□□□ -1.09
SMC3-202ENST00000462899 WNT7BP56706 349 aa8.27□□□□□ -1.09
SMC3-202ENST00000462899 RPL10AP62906 217 aaKnown RBP8.27□□□□□ -1.09
SMC3-202ENST00000462899 POU5F1Q01860 360 aaKnown RBP8.27□□□□□ -1.09
SMC3-202ENST00000462899 RPL6Q02878 288 aaKnown RBP8.27□□□□□ -1.09
SMC3-202ENST00000462899 RAD51AP2Q09MP3 1159 aa8.27□□□□□ -1.09
SMC3-202ENST00000462899 GRIK2Q13002 908 aa8.27□□□□□ -1.09
SMC3-202ENST00000462899 ARSHQ5FYA8 562 aa8.27□□□□□ -1.09
SMC3-202ENST00000462899 SCARA3Q6AZY7 606 aa8.27□□□□□ -1.09
SMC3-202ENST00000462899 RHBDF2Q6PJF5 856 aa8.27□□□□□ -1.09
SMC3-202ENST00000462899 CRELD2Q6UXH1 353 aaPredicted RBP8.27□□□□□ -1.09
SMC3-202ENST00000462899 SLC36A4Q6YBV0 504 aa8.27□□□□□ -1.09
SMC3-202ENST00000462899 FILIP1Q7Z7B0 1213 aa8.27□□□□□ -1.09
SMC3-202ENST00000462899 OSTM1Q86WC4 334 aa8.27□□□□□ -1.09
SMC3-202ENST00000462899 METTL23Q86XA0 190 aa8.27□□□□□ -1.09
SMC3-202ENST00000462899 MIB1Q86YT6 1006 aa8.27□□□□□ -1.09
SMC3-202ENST00000462899 PDCL2Q8N4E4 241 aa8.27□□□□□ -1.09
SMC3-202ENST00000462899 SPATA18Q8TC71 538 aa8.27□□□□□ -1.09
SMC3-202ENST00000462899 ZNF419Q96HQ0 510 aaPredicted RBP8.27□□□□□ -1.09
SMC3-202ENST00000462899 FUBP3Q96I24 572 aaKnown RBP eCLIP8.27□□□□□ -1.09
SMC3-202ENST00000462899 UBL7Q96S82 380 aaPredicted RBP8.27□□□□□ -1.09
SMC3-202ENST00000462899 PNKPQ96T60 521 aa8.27□□□□□ -1.09
SMC3-202ENST00000462899 DUSP9Q99956 384 aaKnown RBP8.27□□□□□ -1.09
SMC3-202ENST00000462899 TTLL2Q9BWV7 592 aa8.27□□□□□ -1.09
SMC3-202ENST00000462899 CD93Q9NPY3 652 aa8.27□□□□□ -1.09
SMC3-202ENST00000462899 KCND2Q9NZV8 630 aa8.27□□□□□ -1.09
SMC3-202ENST00000462899 CALCOCO1Q9P1Z2 691 aa8.27□□□□□ -1.09
SMC3-202ENST00000462899 L1RE1Q9UN81 338 aa8.27□□□□□ -1.09
SMC3-202ENST00000462899 STYXL1Q9Y6J8 313 aa8.27□□□□□ -1.09
SMC3-202ENST00000462899 H0YCG3 227 aa8.26□□□□□ -1.09
SMC3-202ENST00000462899 GABRDO14764 452 aa8.26□□□□□ -1.09
SMC3-202ENST00000462899 ATXN7O15265 892 aaPredicted RBP8.26□□□□□ -1.09
SMC3-202ENST00000462899 HCRTO43612 131 aa8.26□□□□□ -1.09
SMC3-202ENST00000462899 OAS1P00973 400 aaKnown RBP8.26□□□□□ -1.09
SMC3-202ENST00000462899 APODP05090 189 aa8.26□□□□□ -1.09
SMC3-202ENST00000462899 ZNF883P0CG24 379 aa8.26□□□□□ -1.09
SMC3-202ENST00000462899 HDCP19113 662 aa8.26□□□□□ -1.09
SMC3-202ENST00000462899 SCP2P22307 547 aa8.26□□□□□ -1.09
SMC3-202ENST00000462899 PRPHP41219 470 aa8.26□□□□□ -1.09
SMC3-202ENST00000462899 GRIA2P42262 883 aa8.26□□□□□ -1.09
SMC3-202ENST00000462899 MATR3P43243 847 aaKnown RBP eCLIP8.26□□□□□ -1.09
SMC3-202ENST00000462899 MAGEA11P43364 429 aa8.26□□□□□ -1.09
SMC3-202ENST00000462899 LIG4P49917 911 aa8.26□□□□□ -1.09
SMC3-202ENST00000462899 ATP2C1P98194 919 aaPredicted RBP8.26□□□□□ -1.09
SMC3-202ENST00000462899 TSPY1Q01534 308 aa8.26□□□□□ -1.09
SMC3-202ENST00000462899 BNC1Q01954 994 aa8.26□□□□□ -1.09
SMC3-202ENST00000462899 GUCY1B3Q02153 619 aa8.26□□□□□ -1.09
SMC3-202ENST00000462899 C19orf57Q0VDD7 668 aa8.26□□□□□ -1.09
SMC3-202ENST00000462899 RESTQ13127 1097 aa8.26□□□□□ -1.09
SMC3-202ENST00000462899 KCNB1Q14721 858 aa8.26□□□□□ -1.09
SMC3-202ENST00000462899 FAM171BQ6P995 826 aa8.26□□□□□ -1.09
SMC3-202ENST00000462899 LIMS2Q7Z4I7 341 aa8.26□□□□□ -1.09
SMC3-202ENST00000462899 TTC30AQ86WT1 665 aa8.26□□□□□ -1.09
SMC3-202ENST00000462899 KCTD17Q8N5Z5 321 aa8.26□□□□□ -1.09
SMC3-202ENST00000462899 DEFB119Q8N690 84 aa8.26□□□□□ -1.09
SMC3-202ENST00000462899 SPATA17Q96L03 361 aa8.26□□□□□ -1.09
SMC3-202ENST00000462899 CEP295NLQ96MC4 621 aa8.26□□□□□ -1.09
SMC3-202ENST00000462899 HSPA12BQ96MM6 686 aa8.26□□□□□ -1.09
SMC3-202ENST00000462899 MSTO1Q9BUK6 570 aa8.26□□□□□ -1.09
SMC3-202ENST00000462899 RNF38Q9H0F5 515 aa8.26□□□□□ -1.09
Retrieved 100 of 20,778 RNA–protein pairs in 26.2 ms