RNA–Protein interactions for RNA: ENST00000462577.5

PDCD4-204, Transcript of programmed cell death 4, humanhuman

TSL 5

Gene PDCD4, Length 789 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDCD4-204ENST00000462577 DSTYKQ6XUX3 929 aa5.55□□□□□ -1.52
PDCD4-204ENST00000462577 METTL23Q86XA0 190 aa5.55□□□□□ -1.52
PDCD4-204ENST00000462577 TRIM59Q8IWR1 403 aa5.55□□□□□ -1.52
PDCD4-204ENST00000462577 PHF6Q8IWS0 365 aaKnown RBP eCLIP5.55□□□□□ -1.52
PDCD4-204ENST00000462577 TCEAL8Q8IYN2 117 aa5.55□□□□□ -1.52
PDCD4-204ENST00000462577 GJD3Q8N144 294 aa5.55□□□□□ -1.52
PDCD4-204ENST00000462577 TMEM130Q8N3G9 435 aa5.55□□□□□ -1.52
PDCD4-204ENST00000462577 PDCL2Q8N4E4 241 aa5.55□□□□□ -1.52
PDCD4-204ENST00000462577 CSGALNACT2Q8N6G5 542 aa5.55□□□□□ -1.52
PDCD4-204ENST00000462577 ZNF461Q8TAF7 563 aa5.55□□□□□ -1.52
PDCD4-204ENST00000462577 NOC3LQ8WTT2 800 aaKnown RBP5.55□□□□□ -1.52
PDCD4-204ENST00000462577 SUSD6Q92537 303 aa5.55□□□□□ -1.52
PDCD4-204ENST00000462577 SLC35C1Q96A29 364 aa5.55□□□□□ -1.52
PDCD4-204ENST00000462577 TP53INP1Q96A56 240 aa5.55□□□□□ -1.52
PDCD4-204ENST00000462577 CCDC127Q96BQ5 260 aa5.55□□□□□ -1.52
PDCD4-204ENST00000462577 HPDLQ96IR7 371 aa5.55□□□□□ -1.52
PDCD4-204ENST00000462577 B3GALT6Q96L58 329 aa5.55□□□□□ -1.52
PDCD4-204ENST00000462577 SENP8Q96LD8 212 aa5.55□□□□□ -1.52
PDCD4-204ENST00000462577 NECTIN4Q96NY8 510 aa5.55□□□□□ -1.52
PDCD4-204ENST00000462577 MED15Q96RN5 788 aa5.55□□□□□ -1.52
PDCD4-204ENST00000462577 RTP3Q9BQQ7 232 aa5.55□□□□□ -1.52
PDCD4-204ENST00000462577 BCO2Q9BYV7 579 aa5.55□□□□□ -1.52
PDCD4-204ENST00000462577 ZCWPW1Q9H0M4 648 aa5.55□□□□□ -1.52
PDCD4-204ENST00000462577 MUC3BQ9H195 1237 aa5.55□□□□□ -1.52
PDCD4-204ENST00000462577 S1PR5Q9H228 398 aa5.55□□□□□ -1.52
PDCD4-204ENST00000462577 ADAM7Q9H2U9 754 aa5.55□□□□□ -1.52
PDCD4-204ENST00000462577 THAP9Q9H5L6 903 aa5.55□□□□□ -1.52
PDCD4-204ENST00000462577 MAN1C1Q9NR34 630 aa5.55□□□□□ -1.52
PDCD4-204ENST00000462577 PRKAG3Q9UGI9 489 aa5.55□□□□□ -1.52
PDCD4-204ENST00000462577 ARMCX3Q9UH62 379 aaPredicted RBP5.55□□□□□ -1.52
PDCD4-204ENST00000462577 AFF4Q9UHB7 1163 aaKnown RBP5.55□□□□□ -1.52
PDCD4-204ENST00000462577 FBXL5Q9UKA1 691 aa5.55□□□□□ -1.52
PDCD4-204ENST00000462577 L1RE1Q9UN81 338 aa5.55□□□□□ -1.52
PDCD4-204ENST00000462577 FAM50BQ9Y247 325 aa5.55□□□□□ -1.52
PDCD4-204ENST00000462577 CDY1Q9Y6F8 540 aa5.55□□□□□ -1.52
PDCD4-204ENST00000462577 FANCMQ8IYD8 2048 aa5.55□□□□□ -1.52
PDCD4-204ENST00000462577 WDR27A2RRH5 827 aa5.54□□□□□ -1.52
PDCD4-204ENST00000462577 CYB561D2O14569 222 aa5.54□□□□□ -1.52
PDCD4-204ENST00000462577 ADAM12O43184 909 aa5.54□□□□□ -1.52
PDCD4-204ENST00000462577 TGM5O43548 720 aa5.54□□□□□ -1.52
PDCD4-204ENST00000462577 DYRK3O43781 588 aa5.54□□□□□ -1.52
PDCD4-204ENST00000462577 N4BP1O75113 896 aaKnown RBP5.54□□□□□ -1.52
PDCD4-204ENST00000462577 CST3P01034 146 aaPredicted RBP5.54□□□□□ -1.52
PDCD4-204ENST00000462577 HLA-DRAP01903 254 aa5.54□□□□□ -1.52
PDCD4-204ENST00000462577 KRT19P08727 400 aa5.54□□□□□ -1.52
PDCD4-204ENST00000462577 TRIM49P0CI25 452 aa5.54□□□□□ -1.52
PDCD4-204ENST00000462577 TRIM49CP0CI26 452 aa5.54□□□□□ -1.52
PDCD4-204ENST00000462577 P4HA1P13674 534 aa5.54□□□□□ -1.52
PDCD4-204ENST00000462577 ATF2P15336 505 aa5.54□□□□□ -1.52
PDCD4-204ENST00000462577 KCNA5P22460 613 aa5.54□□□□□ -1.52
PDCD4-204ENST00000462577 OR1D2P34982 312 aa5.54□□□□□ -1.52
PDCD4-204ENST00000462577 MTHFRP42898 656 aa5.54□□□□□ -1.52
PDCD4-204ENST00000462577 LHX1P48742 406 aa5.54□□□□□ -1.52
PDCD4-204ENST00000462577 MXI1P50539 228 aa5.54□□□□□ -1.52
PDCD4-204ENST00000462577 MYL6P60660 151 aa5.54□□□□□ -1.52
PDCD4-204ENST00000462577 RBM10P98175 930 aaKnown RBP5.54□□□□□ -1.52
PDCD4-204ENST00000462577 MYL7Q01449 175 aa5.54□□□□□ -1.52
PDCD4-204ENST00000462577 PDE4CQ08493 712 aa5.54□□□□□ -1.52
PDCD4-204ENST00000462577 INCA1Q0VD86 236 aa5.54□□□□□ -1.52
PDCD4-204ENST00000462577 TRPC3Q13507 836 aa5.54□□□□□ -1.52
PDCD4-204ENST00000462577 SMAD2Q15796 467 aaKnown RBP5.54□□□□□ -1.52
PDCD4-204ENST00000462577 STX1AQ16623 288 aa5.54□□□□□ -1.52
PDCD4-204ENST00000462577 SOWAHAQ2M3V2 549 aa5.54□□□□□ -1.52
PDCD4-204ENST00000462577 SGSM1Q2NKQ1 1148 aa5.54□□□□□ -1.52
PDCD4-204ENST00000462577 SKOR2Q2VWA4 1001 aaPredicted RBP5.54□□□□□ -1.52
PDCD4-204ENST00000462577 CTXN3Q4LDR2 81 aa5.54□□□□□ -1.52
PDCD4-204ENST00000462577 ZNF667Q5HYK9 610 aa5.54□□□□□ -1.52
PDCD4-204ENST00000462577 LMBRD2Q68DH5 695 aaPredicted RBP5.54□□□□□ -1.52
PDCD4-204ENST00000462577 SCARA3Q6AZY7 606 aa5.54□□□□□ -1.52
PDCD4-204ENST00000462577 ISM2Q6H9L7 571 aa5.54□□□□□ -1.52
PDCD4-204ENST00000462577 KLHL10Q6JEL2 608 aa5.54□□□□□ -1.52
PDCD4-204ENST00000462577 CCDC149Q6ZUS6 474 aa5.54□□□□□ -1.52
PDCD4-204ENST00000462577 GPR149Q86SP6 731 aa5.54□□□□□ -1.52
PDCD4-204ENST00000462577 RBM23Q86U06 439 aaKnown RBP5.54□□□□□ -1.52
PDCD4-204ENST00000462577 CEP57Q86XR8 500 aa5.54□□□□□ -1.52
PDCD4-204ENST00000462577 IRF2BP1Q8IU81 584 aa5.54□□□□□ -1.52
PDCD4-204ENST00000462577 FAM114A1Q8IWE2 563 aa5.54□□□□□ -1.52
PDCD4-204ENST00000462577 THEM5Q8N1Q8 247 aa5.54□□□□□ -1.52
PDCD4-204ENST00000462577 TTC39CQ8N584 583 aa5.54□□□□□ -1.52
PDCD4-204ENST00000462577 OR10T2Q8NGX3 314 aa5.54□□□□□ -1.52
PDCD4-204ENST00000462577 GADD45GIP1Q8TAE8 222 aaPredicted RBP5.54□□□□□ -1.52
PDCD4-204ENST00000462577 KBTBD7Q8WVZ9 684 aa5.54□□□□□ -1.52
PDCD4-204ENST00000462577 PPM1EQ8WY54 764 aa5.54□□□□□ -1.52
PDCD4-204ENST00000462577 FAM84AQ96KN4 292 aa5.54□□□□□ -1.52
PDCD4-204ENST00000462577 ASB2Q96Q27 587 aa5.54□□□□□ -1.52
PDCD4-204ENST00000462577 PKMYT1Q99640 499 aa5.54□□□□□ -1.52
PDCD4-204ENST00000462577 BPIFA3Q9BQP9 254 aa5.54□□□□□ -1.52
PDCD4-204ENST00000462577 ACBD6Q9BR61 282 aa5.54□□□□□ -1.52
PDCD4-204ENST00000462577 SSBP4Q9BWG4 385 aaPredicted RBP5.54□□□□□ -1.52
PDCD4-204ENST00000462577 KRTAP4-8Q9BYQ9 185 aa5.54□□□□□ -1.52
PDCD4-204ENST00000462577 ADAM19Q9H013 955 aa5.54□□□□□ -1.52
PDCD4-204ENST00000462577 MRPL18Q9H0U6 180 aaKnown RBP5.54□□□□□ -1.52
PDCD4-204ENST00000462577 SRA1Q9HD15 236 aaKnown RBP5.54□□□□□ -1.52
PDCD4-204ENST00000462577 ABCB6Q9NP58 842 aa5.54□□□□□ -1.52
PDCD4-204ENST00000462577 ANO10Q9NW15 660 aa5.54□□□□□ -1.52
PDCD4-204ENST00000462577 BARX2Q9UMQ3 279 aaPredicted RBP5.54□□□□□ -1.52
PDCD4-204ENST00000462577 R3HCC1Q9Y3T6 440 aaKnown RBP5.54□□□□□ -1.52
PDCD4-204ENST00000462577 SNX9Q9Y5X1 595 aa5.54□□□□□ -1.52
PDCD4-204ENST00000462577 MYOFQ9NZM1 2061 aa5.54□□□□□ -1.52
PDCD4-204ENST00000462577 GTPBP10A4D1E9 387 aaKnown RBP5.53□□□□□ -1.52
Retrieved 100 of 20,778 RNA–protein pairs in 20.8 ms