RNA–Protein interactions for RNA: ENST00000462165.2

CBX3-205, Transcript of chromobox 3, humanhuman

TSL 3

Gene CBX3, Length 949 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBX3-205ENST00000462165 GCNT3O95395 438 aa11.57□□□□□ -0.56
CBX3-205ENST00000462165 CAPNS1P04632 268 aa11.57□□□□□ -0.56
CBX3-205ENST00000462165 CFIP05156 583 aa11.57□□□□□ -0.56
CBX3-205ENST00000462165 SERPINF2P08697 491 aa11.57□□□□□ -0.56
CBX3-205ENST00000462165 ADH5P11766 374 aa11.57□□□□□ -0.56
CBX3-205ENST00000462165 WARSP23381 471 aaKnown RBP11.57□□□□□ -0.56
CBX3-205ENST00000462165 CASP5P51878 434 aa11.57□□□□□ -0.56
CBX3-205ENST00000462165 CYP27A1Q02318 531 aa11.57□□□□□ -0.56
CBX3-205ENST00000462165 GFPT1Q06210 699 aaPredicted RBP11.57□□□□□ -0.56
CBX3-205ENST00000462165 ALCAMQ13740 583 aa11.57□□□□□ -0.56
CBX3-205ENST00000462165 HNRNPDQ14103 355 aaKnown RBP11.57□□□□□ -0.56
CBX3-205ENST00000462165 SLC36A4Q6YBV0 504 aa11.57□□□□□ -0.56
CBX3-205ENST00000462165 RABEPKQ7Z6M1 372 aa11.57□□□□□ -0.56
CBX3-205ENST00000462165 RAB44Q7Z6P3 723 aaPredicted RBP11.57□□□□□ -0.56
CBX3-205ENST00000462165 PROSER1Q86XN7 944 aa11.57□□□□□ -0.56
CBX3-205ENST00000462165 PGBD3Q8N328 593 aa11.57□□□□□ -0.56
CBX3-205ENST00000462165 MYCBPAPQ8TBZ2 947 aa11.57□□□□□ -0.56
CBX3-205ENST00000462165 KCNV2Q8TDN2 545 aa11.57□□□□□ -0.56
CBX3-205ENST00000462165 HPDLQ96IR7 371 aa11.57□□□□□ -0.56
CBX3-205ENST00000462165 EPSTI1Q96J88 318 aa11.57□□□□□ -0.56
CBX3-205ENST00000462165 C8orf48Q96LL4 319 aa11.57□□□□□ -0.56
CBX3-205ENST00000462165 CBWD1Q9BRT8 395 aa11.57□□□□□ -0.56
CBX3-205ENST00000462165 GTPBP2Q9BX10 602 aaKnown RBP11.57□□□□□ -0.56
CBX3-205ENST00000462165 CAPN10Q9HC96 672 aa11.57□□□□□ -0.56
CBX3-205ENST00000462165 ZDHHC4Q9NPG8 344 aa11.57□□□□□ -0.56
CBX3-205ENST00000462165 FSCN3Q9NQT6 498 aa11.57□□□□□ -0.56
CBX3-205ENST00000462165 INTS13Q9NVM9 706 aa11.57□□□□□ -0.56
CBX3-205ENST00000462165 SMPD4Q9NXE4 827 aa11.57□□□□□ -0.56
CBX3-205ENST00000462165 TBC1D7Q9P0N9 293 aa11.57□□□□□ -0.56
CBX3-205ENST00000462165 CFAP97Q9P2B7 532 aa11.57□□□□□ -0.56
CBX3-205ENST00000462165 TBC1D14Q9P2M4 693 aa11.57□□□□□ -0.56
CBX3-205ENST00000462165 R3HCC1Q9Y3T6 440 aaKnown RBP11.57□□□□□ -0.56
CBX3-205ENST00000462165 CELSR3Q9NYQ7 3312 aa11.57□□□□□ -0.56
CBX3-205ENST00000462165 SMG1Q96Q15 3661 aaKnown RBP11.57□□□□□ -0.56
CBX3-205ENST00000462165 PLXNB3Q9ULL4 1909 aa11.56□□□□□ -0.56
CBX3-205ENST00000462165 E2F8A0AVK6 867 aa11.56□□□□□ -0.56
CBX3-205ENST00000462165 SCAMP3O14828 347 aaKnown RBP11.56□□□□□ -0.56
CBX3-205ENST00000462165 KIAA0391O15091 583 aaKnown RBP11.56□□□□□ -0.56
CBX3-205ENST00000462165 PDGFRBP09619 1106 aa11.56□□□□□ -0.56
CBX3-205ENST00000462165 FAM193AP78312 1265 aa11.56□□□□□ -0.56
CBX3-205ENST00000462165 RPL6Q02878 288 aaKnown RBP11.56□□□□□ -0.56
CBX3-205ENST00000462165 GAD2Q05329 585 aa11.56□□□□□ -0.56
CBX3-205ENST00000462165 KDSRQ06136 332 aa11.56□□□□□ -0.56
CBX3-205ENST00000462165 ZNF33AQ06730 810 aa11.56□□□□□ -0.56
CBX3-205ENST00000462165 TAF10Q12962 218 aa11.56□□□□□ -0.56
CBX3-205ENST00000462165 SF3A1Q15459 793 aaKnown RBP11.56□□□□□ -0.56
CBX3-205ENST00000462165 SURF1Q15526 300 aa11.56□□□□□ -0.56
CBX3-205ENST00000462165 ZNF423Q2M1K9 1284 aa11.56□□□□□ -0.56
CBX3-205ENST00000462165 PREPLQ4J6C6 727 aaPredicted RBP11.56□□□□□ -0.56
CBX3-205ENST00000462165 LY6G5CQ5SRR4 150 aa11.56□□□□□ -0.56
CBX3-205ENST00000462165 TDRD10Q5VZ19 366 aaKnown RBP11.56□□□□□ -0.56
CBX3-205ENST00000462165 USP49Q70CQ1 688 aa11.56□□□□□ -0.56
CBX3-205ENST00000462165 TRMT11Q7Z4G4 463 aaKnown RBP11.56□□□□□ -0.56
CBX3-205ENST00000462165 ETFBKMTQ8IXQ9 262 aa11.56□□□□□ -0.56
CBX3-205ENST00000462165 SYCP3Q8IZU3 236 aa11.56□□□□□ -0.56
CBX3-205ENST00000462165 GPD1LQ8N335 351 aa11.56□□□□□ -0.56
CBX3-205ENST00000462165 CHCHD4Q8N4Q1 142 aa11.56□□□□□ -0.56
CBX3-205ENST00000462165 MINDY1Q8N5J2 469 aa11.56□□□□□ -0.56
CBX3-205ENST00000462165 OR5B17Q8NGF7 314 aa11.56□□□□□ -0.56
CBX3-205ENST00000462165 OTUB2Q96DC9 234 aa11.56□□□□□ -0.56
CBX3-205ENST00000462165 SLITRK1Q96PX8 696 aa11.56□□□□□ -0.56
CBX3-205ENST00000462165 DUSP9Q99956 384 aaKnown RBP11.56□□□□□ -0.56
CBX3-205ENST00000462165 PCIF1Q9H4Z3 704 aa11.56□□□□□ -0.56
CBX3-205ENST00000462165 CCDC39Q9UFE4 941 aa11.56□□□□□ -0.56
CBX3-205ENST00000462165 PTPRJQ12913 1337 aa11.56□□□□□ -0.56
CBX3-205ENST00000462165 FRMD3A2A2Y4 597 aa11.55□□□□□ -0.56
CBX3-205ENST00000462165 ARHGAP33O14559 1287 aa11.55□□□□□ -0.56
CBX3-205ENST00000462165 ABL1P00519 1130 aa11.55□□□□□ -0.56
CBX3-205ENST00000462165 TNNC2P02585 160 aa11.55□□□□□ -0.56
CBX3-205ENST00000462165 SYPP08247 313 aa11.55□□□□□ -0.56
CBX3-205ENST00000462165 FAM163BP0C2L3 166 aa11.55□□□□□ -0.56
CBX3-205ENST00000462165 MBL2P11226 248 aaPredicted RBP11.55□□□□□ -0.56
CBX3-205ENST00000462165 CD59P13987 128 aa11.55□□□□□ -0.56
CBX3-205ENST00000462165 GABRG2P18507 467 aa11.55□□□□□ -0.56
CBX3-205ENST00000462165 MDH1BQ5I0G3 518 aa11.55□□□□□ -0.56
CBX3-205ENST00000462165 SV2BQ7L1I2 683 aa11.55□□□□□ -0.56
CBX3-205ENST00000462165 BRAPQ7Z569 592 aa11.55□□□□□ -0.56
CBX3-205ENST00000462165 ZNF513Q8N8E2 541 aaPredicted RBP11.55□□□□□ -0.56
CBX3-205ENST00000462165 NOC3LQ8WTT2 800 aaKnown RBP11.55□□□□□ -0.56
CBX3-205ENST00000462165 OVCA2Q8WZ82 227 aa11.55□□□□□ -0.56
CBX3-205ENST00000462165 TMX3Q96JJ7 454 aa11.55□□□□□ -0.56
CBX3-205ENST00000462165 ZFRQ96KR1 1074 aaKnown RBP11.55□□□□□ -0.56
CBX3-205ENST00000462165 MMS19Q96T76 1030 aa11.55□□□□□ -0.56
CBX3-205ENST00000462165 FGFBP2Q9BYJ0 223 aa11.55□□□□□ -0.56
CBX3-205ENST00000462165 ELOVL4Q9GZR5 314 aa11.55□□□□□ -0.56
CBX3-205ENST00000462165 DNAAF2Q9NVR5 837 aaKnown RBP11.55□□□□□ -0.56
CBX3-205ENST00000462165 CALCOCO1Q9P1Z2 691 aa11.55□□□□□ -0.56
CBX3-205ENST00000462165 STARD13Q9Y3M8 1113 aa11.55□□□□□ -0.56
CBX3-205ENST00000462165 NME7Q9Y5B8 376 aa11.55□□□□□ -0.56
CBX3-205ENST00000462165 PTPRBP23467 1997 aa11.55□□□□□ -0.56
CBX3-205ENST00000462165 IGHV1OR15-9A0A0B4J2B8 117 aa11.54□□□□□ -0.56
CBX3-205ENST00000462165 A0A1W2PQD8 194 aa11.54□□□□□ -0.56
CBX3-205ENST00000462165 TBC1D3BA6NDS4 549 aa11.54□□□□□ -0.56
CBX3-205ENST00000462165 ZNF233A6NK53 670 aa11.54□□□□□ -0.56
CBX3-205ENST00000462165 HOXC11O43248 304 aaPredicted RBP11.54□□□□□ -0.56
CBX3-205ENST00000462165 ZNF217O75362 1048 aa11.54□□□□□ -0.56
CBX3-205ENST00000462165 TULP3O75386 442 aa11.54□□□□□ -0.56
CBX3-205ENST00000462165 TACC1O75410 805 aa11.54□□□□□ -0.56
CBX3-205ENST00000462165 HOXB2P14652 356 aa11.54□□□□□ -0.56
CBX3-205ENST00000462165 NTSR1P30989 418 aa11.54□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 17.9 ms