RNA–Protein interactions for RNA: ENST00000462122.1

TRAF3IP1-204, Transcript of TRAF3 interacting protein 1, humanhuman

TSL 3

Gene TRAF3IP1, Length 922 nt, Biotype retained intron, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF3IP1-204ENST00000462122 DENND1BQ6P3S1 775 aa12.28□□□□□ -0.44
TRAF3IP1-204ENST00000462122 RNF135Q8IUD6 432 aa12.28□□□□□ -0.44
TRAF3IP1-204ENST00000462122 CMTM8Q8IZV2 173 aa12.28□□□□□ -0.44
TRAF3IP1-204ENST00000462122 SIX6OS1Q8N1H7 587 aa12.28□□□□□ -0.44
TRAF3IP1-204ENST00000462122 ARHGAP18Q8N392 663 aa12.28□□□□□ -0.44
TRAF3IP1-204ENST00000462122 MAB21L3Q8N8X9 362 aa12.28□□□□□ -0.44
TRAF3IP1-204ENST00000462122 EPS8L1Q8TE68 723 aa12.28□□□□□ -0.44
TRAF3IP1-204ENST00000462122 ZSWIM3Q96MP5 696 aa12.28□□□□□ -0.44
TRAF3IP1-204ENST00000462122 NOX5Q96PH1 765 aa12.28□□□□□ -0.44
TRAF3IP1-204ENST00000462122 SLC46A2Q9BY10 475 aa12.28□□□□□ -0.44
TRAF3IP1-204ENST00000462122 XPO4Q9C0E2 1151 aaKnown RBP12.28□□□□□ -0.44
TRAF3IP1-204ENST00000462122 TTYH3Q9C0H2 523 aa12.28□□□□□ -0.44
TRAF3IP1-204ENST00000462122 PDCL3Q9H2J4 239 aa12.28□□□□□ -0.44
TRAF3IP1-204ENST00000462122 KIF9Q9HAQ2 790 aa12.28□□□□□ -0.44
TRAF3IP1-204ENST00000462122 ZFP14Q9HCL3 533 aa12.28□□□□□ -0.44
TRAF3IP1-204ENST00000462122 TRPC7Q9HCX4 862 aa12.28□□□□□ -0.44
TRAF3IP1-204ENST00000462122 CYLDQ9NQC7 956 aa12.28□□□□□ -0.44
TRAF3IP1-204ENST00000462122 CNGB3Q9NQW8 809 aa12.28□□□□□ -0.44
TRAF3IP1-204ENST00000462122 GMIPQ9P107 970 aa12.28□□□□□ -0.44
TRAF3IP1-204ENST00000462122 LIMD1Q9UGP4 676 aa12.28□□□□□ -0.44
TRAF3IP1-204ENST00000462122 NUMBLQ9Y6R0 609 aa12.28□□□□□ -0.44
TRAF3IP1-204ENST00000462122 TCF20Q9UGU0 1960 aaKnown RBP12.28□□□□□ -0.44
TRAF3IP1-204ENST00000462122 ITIH6Q6UXX5 1313 aa12.28□□□□□ -0.44
TRAF3IP1-204ENST00000462122 NCOR1O75376 2440 aa12.27□□□□□ -0.44
TRAF3IP1-204ENST00000462122 DOCK8Q8NF50 2099 aa12.27□□□□□ -0.45
TRAF3IP1-204ENST00000462122 A0A1W2PQJ5 194 aa12.27□□□□□ -0.45
TRAF3IP1-204ENST00000462122 FBXO21O94952 628 aa12.27□□□□□ -0.45
TRAF3IP1-204ENST00000462122 ZBED1O96006 694 aa12.27□□□□□ -0.45
TRAF3IP1-204ENST00000462122 USP17L7P0C7H9 530 aa12.27□□□□□ -0.45
TRAF3IP1-204ENST00000462122 FERP16591 822 aa12.27□□□□□ -0.45
TRAF3IP1-204ENST00000462122 FCARP24071 287 aa12.27□□□□□ -0.45
TRAF3IP1-204ENST00000462122 ACADSBP45954 432 aa12.27□□□□□ -0.45
TRAF3IP1-204ENST00000462122 RPL34P49207 117 aaKnown RBP12.27□□□□□ -0.45
TRAF3IP1-204ENST00000462122 ADIGQ0VDE8 80 aa12.27□□□□□ -0.45
TRAF3IP1-204ENST00000462122 PDCLQ13371 301 aa12.27□□□□□ -0.45
TRAF3IP1-204ENST00000462122 PTPN21Q16825 1174 aa12.27□□□□□ -0.45
TRAF3IP1-204ENST00000462122 PM20D1Q6GTS8 502 aa12.27□□□□□ -0.45
TRAF3IP1-204ENST00000462122 PMF1Q6P1K2 205 aa12.27□□□□□ -0.45
TRAF3IP1-204ENST00000462122 SARM1Q6SZW1 724 aa12.27□□□□□ -0.45
TRAF3IP1-204ENST00000462122 PARM1Q6UWI2 310 aa12.27□□□□□ -0.45
TRAF3IP1-204ENST00000462122 SCML4Q8N228 414 aa12.27□□□□□ -0.45
TRAF3IP1-204ENST00000462122 ZNF397Q8NF99 534 aaPredicted RBP12.27□□□□□ -0.45
TRAF3IP1-204ENST00000462122 BAP1Q92560 729 aa12.27□□□□□ -0.45
TRAF3IP1-204ENST00000462122 FGF14Q92915 247 aa12.27□□□□□ -0.45
TRAF3IP1-204ENST00000462122 ELSPBP1Q96BH3 223 aa12.27□□□□□ -0.45
TRAF3IP1-204ENST00000462122 CDK5RAP1Q96SZ6 601 aaKnown RBP12.27□□□□□ -0.45
TRAF3IP1-204ENST00000462122 COL25A1Q9BXS0 654 aaPredicted RBP12.27□□□□□ -0.45
TRAF3IP1-204ENST00000462122 CD320Q9NPF0 282 aa12.27□□□□□ -0.45
TRAF3IP1-204ENST00000462122 OBP2AQ9NY56 170 aa12.27□□□□□ -0.45
TRAF3IP1-204ENST00000462122 CLIC5Q9NZA1 410 aa12.27□□□□□ -0.45
TRAF3IP1-204ENST00000462122 CHORDC1Q9UHD1 332 aaPredicted RBP12.27□□□□□ -0.45
TRAF3IP1-204ENST00000462122 SORCS3Q9UPU3 1222 aa12.27□□□□□ -0.45
TRAF3IP1-204ENST00000462122 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP12.27□□□□□ -0.45
TRAF3IP1-204ENST00000462122 GREB1Q4ZG55 1949 aa12.27□□□□□ -0.45
TRAF3IP1-204ENST00000462122 DOCK6Q96HP0 2047 aa12.27□□□□□ -0.45
TRAF3IP1-204ENST00000462122 C2orf78A6NCI8 922 aa12.26□□□□□ -0.45
TRAF3IP1-204ENST00000462122 DPYSL4O14531 572 aa12.26□□□□□ -0.45
TRAF3IP1-204ENST00000462122 SART1O43290 800 aaKnown RBP12.26□□□□□ -0.45
TRAF3IP1-204ENST00000462122 LSM8O95777 96 aaKnown RBP12.26□□□□□ -0.45
TRAF3IP1-204ENST00000462122 OLFM2O95897 454 aa12.26□□□□□ -0.45
TRAF3IP1-204ENST00000462122 ABL1P00519 1130 aa12.26□□□□□ -0.45
TRAF3IP1-204ENST00000462122 OAS1P00973 400 aaKnown RBP12.26□□□□□ -0.45
TRAF3IP1-204ENST00000462122 CKMP06732 381 aa12.26□□□□□ -0.45
TRAF3IP1-204ENST00000462122 ASGR2P07307 311 aa12.26□□□□□ -0.45
TRAF3IP1-204ENST00000462122 HDCP19113 662 aa12.26□□□□□ -0.45
TRAF3IP1-204ENST00000462122 RGS7P49802 495 aa12.26□□□□□ -0.45
TRAF3IP1-204ENST00000462122 SNX16P57768 344 aa12.26□□□□□ -0.45
TRAF3IP1-204ENST00000462122 CDR2Q01850 454 aa12.26□□□□□ -0.45
TRAF3IP1-204ENST00000462122 TDGQ13569 410 aa12.26□□□□□ -0.45
TRAF3IP1-204ENST00000462122 ZNF268Q14587 947 aaPredicted RBP12.26□□□□□ -0.45
TRAF3IP1-204ENST00000462122 HECTD3Q5T447 861 aa12.26□□□□□ -0.45
TRAF3IP1-204ENST00000462122 TADA2BQ86TJ2 420 aa12.26□□□□□ -0.45
TRAF3IP1-204ENST00000462122 NOP9Q86U38 636 aaKnown RBP12.26□□□□□ -0.45
TRAF3IP1-204ENST00000462122 GAS2L3Q86XJ1 694 aa12.26□□□□□ -0.45
TRAF3IP1-204ENST00000462122 PASD1Q8IV76 773 aa12.26□□□□□ -0.45
TRAF3IP1-204ENST00000462122 ARID3BQ8IVW6 561 aaPredicted RBP12.26□□□□□ -0.45
TRAF3IP1-204ENST00000462122 CELF5Q8N6W0 485 aaKnown RBP12.26□□□□□ -0.45
TRAF3IP1-204ENST00000462122 TMEM35BQ8NCS4 154 aa12.26□□□□□ -0.45
TRAF3IP1-204ENST00000462122 DEPDC1BQ8WUY9 529 aa12.26□□□□□ -0.45
TRAF3IP1-204ENST00000462122 IRGQQ8WZA9 623 aa12.26□□□□□ -0.45
TRAF3IP1-204ENST00000462122 DDX1Q92499 740 aaKnown RBP12.26□□□□□ -0.45
TRAF3IP1-204ENST00000462122 SLC4A5Q9BY07 1137 aa12.26□□□□□ -0.45
TRAF3IP1-204ENST00000462122 ULBP1Q9BZM6 244 aa12.26□□□□□ -0.45
TRAF3IP1-204ENST00000462122 NUCKS1Q9H1E3 243 aaKnown RBP12.26□□□□□ -0.45
TRAF3IP1-204ENST00000462122 RBSNQ9H1K0 784 aa12.26□□□□□ -0.45
TRAF3IP1-204ENST00000462122 ST7Q9NRC1 585 aa12.26□□□□□ -0.45
TRAF3IP1-204ENST00000462122 TDP1Q9NUW8 608 aa12.26□□□□□ -0.45
TRAF3IP1-204ENST00000462122 NOCTQ9UK39 431 aaKnown RBP12.26□□□□□ -0.45
TRAF3IP1-204ENST00000462122 A0A1W2PQH9 124 aa12.25□□□□□ -0.45
TRAF3IP1-204ENST00000462122 LRRC53A6NM62 1247 aa12.25□□□□□ -0.45
TRAF3IP1-204ENST00000462122 TNFRSF10AO00220 468 aa12.25□□□□□ -0.45
TRAF3IP1-204ENST00000462122 TLR5O60602 858 aa12.25□□□□□ -0.45
TRAF3IP1-204ENST00000462122 PRAMEF12O95522 483 aa12.25□□□□□ -0.45
TRAF3IP1-204ENST00000462122 CFHP08603 1231 aa12.25□□□□□ -0.45
TRAF3IP1-204ENST00000462122 RALAP11233 206 aa12.25□□□□□ -0.45
TRAF3IP1-204ENST00000462122 LCP1P13796 627 aa12.25□□□□□ -0.45
TRAF3IP1-204ENST00000462122 CDH5P33151 784 aaPredicted RBP12.25□□□□□ -0.45
TRAF3IP1-204ENST00000462122 DAOAP59103 153 aa12.25□□□□□ -0.45
TRAF3IP1-204ENST00000462122 SLC7A9P82251 487 aa12.25□□□□□ -0.45
TRAF3IP1-204ENST00000462122 PLCB2Q00722 1185 aa12.25□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 24.3 ms