RNA–Protein interactions for RNA: ENST00000461522.1

UBA3-204, Transcript of ubiquitin like modifier activating enzyme 3, humanhuman

TSL 2

Gene UBA3, Length 693 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBA3-204ENST00000461522 USP1O94782 785 aa5.18□□□□□ -1.58
UBA3-204ENST00000461522 TOP3BO95985 862 aaKnown RBP5.18□□□□□ -1.58
UBA3-204ENST00000461522 CYP2A6P11509 494 aaPredicted RBP5.18□□□□□ -1.58
UBA3-204ENST00000461522 ITGB6P18564 788 aa5.18□□□□□ -1.58
UBA3-204ENST00000461522 BCAT1P54687 386 aa5.18□□□□□ -1.58
UBA3-204ENST00000461522 PSG6Q00889 435 aa5.18□□□□□ -1.58
UBA3-204ENST00000461522 CCNIQ14094 377 aa5.18□□□□□ -1.58
UBA3-204ENST00000461522 CERKLQ49MI3 558 aaPredicted RBP5.18□□□□□ -1.58
UBA3-204ENST00000461522 BCDIN3DQ7Z5W3 292 aaKnown RBP5.18□□□□□ -1.58
UBA3-204ENST00000461522 MICU3Q86XE3 530 aa5.18□□□□□ -1.58
UBA3-204ENST00000461522 SFTPA1Q8IWL2 248 aa5.18□□□□□ -1.58
UBA3-204ENST00000461522 ZNF366Q8N895 744 aa5.18□□□□□ -1.58
UBA3-204ENST00000461522 OR56A3Q8NH54 315 aa5.18□□□□□ -1.58
UBA3-204ENST00000461522 DENND1AQ8TEH3 1009 aa5.18□□□□□ -1.58
UBA3-204ENST00000461522 SUCLG2Q96I99 432 aa5.18□□□□□ -1.58
UBA3-204ENST00000461522 ZNF48Q96MX3 618 aaPredicted RBP5.18□□□□□ -1.58
UBA3-204ENST00000461522 WDR26Q9H7D7 661 aa5.18□□□□□ -1.58
UBA3-204ENST00000461522 A1CFQ9NQ94 594 aaKnown RBP5.18□□□□□ -1.58
UBA3-204ENST00000461522 ASIC5Q9NY37 505 aa5.18□□□□□ -1.58
UBA3-204ENST00000461522 AMFRQ9UKV5 643 aa5.18□□□□□ -1.58
UBA3-204ENST00000461522 CDY1Q9Y6F8 540 aa5.18□□□□□ -1.58
UBA3-204ENST00000461522 USP19O94966 1318 aa5.18□□□□□ -1.58
UBA3-204ENST00000461522 PTPRGP23470 1445 aa5.17□□□□□ -1.58
UBA3-204ENST00000461522 FAM227AF5H4B4 570 aa5.17□□□□□ -1.58
UBA3-204ENST00000461522 UBE2Q2LH0YL09 131 aa5.17□□□□□ -1.58
UBA3-204ENST00000461522 BCAR3O75815 825 aa5.17□□□□□ -1.58
UBA3-204ENST00000461522 FGAP02671 866 aa5.17□□□□□ -1.58
UBA3-204ENST00000461522 U2AF1L5P0DN76 240 aaPredicted RBP5.17□□□□□ -1.58
UBA3-204ENST00000461522 GKP32189 559 aa5.17□□□□□ -1.58
UBA3-204ENST00000461522 ARHGAP25P42331 645 aa5.17□□□□□ -1.58
UBA3-204ENST00000461522 ALDH5A1P51649 535 aaPredicted RBP5.17□□□□□ -1.58
UBA3-204ENST00000461522 U2AF1Q01081 240 aaKnown RBP eCLIP5.17□□□□□ -1.58
UBA3-204ENST00000461522 MLC1Q15049 377 aa5.17□□□□□ -1.58
UBA3-204ENST00000461522 APOA5Q6Q788 366 aa5.17□□□□□ -1.58
UBA3-204ENST00000461522 ZDHHC24Q6UX98 284 aa5.17□□□□□ -1.58
UBA3-204ENST00000461522 RAVER1Q8IY67 606 aaKnown RBP5.17□□□□□ -1.58
UBA3-204ENST00000461522 SPARTQ8N0X7 666 aa5.17□□□□□ -1.58
UBA3-204ENST00000461522 SIRT6Q8N6T7 355 aa5.17□□□□□ -1.58
UBA3-204ENST00000461522 FCRL4Q96PJ5 515 aa5.17□□□□□ -1.58
UBA3-204ENST00000461522 MMS19Q96T76 1030 aa5.17□□□□□ -1.58
UBA3-204ENST00000461522 TRIM5Q9C035 493 aa5.17□□□□□ -1.58
UBA3-204ENST00000461522 STK32BQ9NY57 414 aa5.17□□□□□ -1.58
UBA3-204ENST00000461522 DNMT3BQ9UBC3 853 aaKnown RBP5.17□□□□□ -1.58
UBA3-204ENST00000461522 L1RE1Q9UN81 338 aa5.17□□□□□ -1.58
UBA3-204ENST00000461522 DRG1Q9Y295 367 aaKnown RBP5.17□□□□□ -1.58
UBA3-204ENST00000461522 TBC1D30Q9Y2I9 924 aa5.17□□□□□ -1.58
UBA3-204ENST00000461522 WDR17Q8IZU2 1322 aa5.17□□□□□ -1.58
UBA3-204ENST00000461522 IQGAP2Q13576 1575 aa5.16□□□□□ -1.58
UBA3-204ENST00000461522 SHROOM2Q13796 1616 aa5.16□□□□□ -1.58
UBA3-204ENST00000461522 TRIM43BA6NCK2 446 aa5.16□□□□□ -1.58
UBA3-204ENST00000461522 MBD3L4A6NDZ8 208 aaPredicted RBP5.16□□□□□ -1.58
UBA3-204ENST00000461522 MBD3L3A6NE82 208 aaPredicted RBP5.16□□□□□ -1.58
UBA3-204ENST00000461522 KCNU1A8MYU2 1149 aa5.16□□□□□ -1.58
UBA3-204ENST00000461522 M0R3H8 397 aa5.16□□□□□ -1.58
UBA3-204ENST00000461522 PRPF3O43395 683 aaKnown RBP5.16□□□□□ -1.58
UBA3-204ENST00000461522 FRS3O43559 492 aa5.16□□□□□ -1.58
UBA3-204ENST00000461522 MARCH6O60337 910 aa5.16□□□□□ -1.58
UBA3-204ENST00000461522 PMPCBO75439 489 aa5.16□□□□□ -1.58
UBA3-204ENST00000461522 ODR4Q5SWX8 454 aa5.16□□□□□ -1.58
UBA3-204ENST00000461522 FAM102BQ5T8I3 360 aa5.16□□□□□ -1.58
UBA3-204ENST00000461522 SERPINA13PQ6UXR4 307 aa5.16□□□□□ -1.58
UBA3-204ENST00000461522 DNAJB14Q8TBM8 379 aa5.16□□□□□ -1.58
UBA3-204ENST00000461522 SPSB4Q96A44 273 aa5.16□□□□□ -1.58
UBA3-204ENST00000461522 TRIM43Q96BQ3 446 aaPredicted RBP5.16□□□□□ -1.58
UBA3-204ENST00000461522 ZC3H10Q96K80 434 aaKnown RBP5.16□□□□□ -1.58
UBA3-204ENST00000461522 PPP1R9BQ96SB3 815 aa5.16□□□□□ -1.58
UBA3-204ENST00000461522 TUBA8Q9NY65 449 aaPredicted RBP5.16□□□□□ -1.58
UBA3-204ENST00000461522 TFCP2L1Q9NZI6 479 aa5.16□□□□□ -1.58
UBA3-204ENST00000461522 DISP1Q96F81 1524 aa5.16□□□□□ -1.58
UBA3-204ENST00000461522 ZNF521Q96K83 1311 aa5.16□□□□□ -1.58
UBA3-204ENST00000461522 EFCAB5A4FU69 1503 aa5.15□□□□□ -1.58
UBA3-204ENST00000461522 KRTAP29-1A8MX34 341 aaPredicted RBP5.15□□□□□ -1.59
UBA3-204ENST00000461522 ISM1B1AKI9 464 aa5.15□□□□□ -1.59
UBA3-204ENST00000461522 BTBD19C9JJ37 291 aa5.15□□□□□ -1.59
UBA3-204ENST00000461522 E5RJQ4 531 aa5.15□□□□□ -1.59
UBA3-204ENST00000461522 PSMD9O00233 223 aa5.15□□□□□ -1.59
UBA3-204ENST00000461522 PPEF2O14830 753 aa5.15□□□□□ -1.59
UBA3-204ENST00000461522 CCP110O43303 1012 aa5.15□□□□□ -1.59
UBA3-204ENST00000461522 KLRC1P26715 233 aa5.15□□□□□ -1.59
UBA3-204ENST00000461522 PRKAR1BP31321 381 aa5.15□□□□□ -1.59
UBA3-204ENST00000461522 SUMO3P55854 103 aaPredicted RBP5.15□□□□□ -1.59
UBA3-204ENST00000461522 SUMO2P61956 95 aaKnown RBP5.15□□□□□ -1.59
UBA3-204ENST00000461522 TIAL1Q01085 375 aaKnown RBP eCLIP5.15□□□□□ -1.59
UBA3-204ENST00000461522 CNN3Q15417 329 aaKnown RBP5.15□□□□□ -1.59
UBA3-204ENST00000461522 FAM187BQ17R55 369 aa5.15□□□□□ -1.59
UBA3-204ENST00000461522 INSCQ1MX18 579 aa5.15□□□□□ -1.59
UBA3-204ENST00000461522 MIS18BP1Q6P0N0 1132 aa5.15□□□□□ -1.59
UBA3-204ENST00000461522 ZNF813Q6ZN06 617 aa5.15□□□□□ -1.59
UBA3-204ENST00000461522 PTCHD4Q6ZW05 846 aa5.15□□□□□ -1.59
UBA3-204ENST00000461522 RAB11FIP4Q86YS3 637 aa5.15□□□□□ -1.59
UBA3-204ENST00000461522 CNGA4Q8IV77 575 aa5.15□□□□□ -1.59
UBA3-204ENST00000461522 ZNF398Q8TD17 642 aa5.15□□□□□ -1.59
UBA3-204ENST00000461522 ADAMTS18Q8TE60 1221 aa5.15□□□□□ -1.59
UBA3-204ENST00000461522 CTHRC1Q96CG8 243 aa5.15□□□□□ -1.59
UBA3-204ENST00000461522 NMD3Q96D46 503 aaKnown RBP5.15□□□□□ -1.59
UBA3-204ENST00000461522 FYTTD1Q96QD9 318 aaKnown RBP5.15□□□□□ -1.59
UBA3-204ENST00000461522 VN1R3Q9BXE9 311 aa5.15□□□□□ -1.59
UBA3-204ENST00000461522 SPRTNQ9H040 489 aaPredicted RBP5.15□□□□□ -1.59
UBA3-204ENST00000461522 VPS16Q9H269 839 aa5.15□□□□□ -1.59
UBA3-204ENST00000461522 C1orf112Q9NSG2 853 aa5.15□□□□□ -1.59
Retrieved 100 of 20,778 RNA–protein pairs in 24.2 ms