RNA–Protein interactions for RNA: ENST00000460168.1

HERC4-207, Transcript of HECT and RLD domain containing E3 ubiquitin protein ligase 4, humanhuman

TSL 2

Gene HERC4, Length 2,215 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERC4-207ENST00000460168 CNGA2Q16280 664 aa10.87□□□□□ -0.67
HERC4-207ENST00000460168 PABPC1LQ4VXU2 614 aaKnown RBP10.87□□□□□ -0.67
HERC4-207ENST00000460168 CCDC38Q502W7 563 aa10.87□□□□□ -0.67
HERC4-207ENST00000460168 CEP85LQ5SZL2 805 aa10.87□□□□□ -0.67
HERC4-207ENST00000460168 SLC24A5Q71RS6 500 aa10.87□□□□□ -0.67
HERC4-207ENST00000460168 UNC93AQ86WB7 457 aa10.87□□□□□ -0.67
HERC4-207ENST00000460168 ADGRF2Q8IZF7 708 aa10.87□□□□□ -0.67
HERC4-207ENST00000460168 WDTC1Q8N5D0 677 aa10.87□□□□□ -0.67
HERC4-207ENST00000460168 MSANTD4Q8NCY6 345 aa10.87□□□□□ -0.67
HERC4-207ENST00000460168 MS4A14Q96JA4 679 aa10.87□□□□□ -0.67
HERC4-207ENST00000460168 NAP1L3Q99457 506 aaPredicted RBP10.87□□□□□ -0.67
HERC4-207ENST00000460168 SELENOOQ9BVL4 669 aa10.87□□□□□ -0.67
HERC4-207ENST00000460168 FTHL17Q9BXU8 183 aa10.87□□□□□ -0.67
HERC4-207ENST00000460168 RGS18Q9NS28 235 aa10.87□□□□□ -0.67
HERC4-207ENST00000460168 FAM49BQ9NUQ9 324 aa10.87□□□□□ -0.67
HERC4-207ENST00000460168 RNF14Q9UBS8 474 aa10.87□□□□□ -0.67
HERC4-207ENST00000460168 TSPAN16Q9UKR8 245 aa10.87□□□□□ -0.67
HERC4-207ENST00000460168 STRIP2Q9ULQ0 834 aa10.87□□□□□ -0.67
HERC4-207ENST00000460168 L1RE1Q9UN81 338 aa10.87□□□□□ -0.67
HERC4-207ENST00000460168 FAM169AQ9Y6X4 670 aa10.87□□□□□ -0.67
HERC4-207ENST00000460168 MKI67P46013 3256 aaKnown RBP10.87□□□□□ -0.67
HERC4-207ENST00000460168 PITPNM1O00562 1244 aa10.86□□□□□ -0.67
HERC4-207ENST00000460168 CYB561D2O14569 222 aa10.86□□□□□ -0.67
HERC4-207ENST00000460168 SGTAO43765 313 aa10.86□□□□□ -0.67
HERC4-207ENST00000460168 PDGFRBP09619 1106 aa10.86□□□□□ -0.67
HERC4-207ENST00000460168 COMTP21964 271 aa10.86□□□□□ -0.67
HERC4-207ENST00000460168 C1QTNF8P60827 252 aa10.86□□□□□ -0.67
HERC4-207ENST00000460168 TUBB4BP68371 445 aa10.86□□□□□ -0.67
HERC4-207ENST00000460168 PTP4A2Q12974 167 aa10.86□□□□□ -0.67
HERC4-207ENST00000460168 MAMLD1Q13495 774 aa10.86□□□□□ -0.67
HERC4-207ENST00000460168 SLMAPQ14BN4 828 aa10.86□□□□□ -0.67
HERC4-207ENST00000460168 CYP4A22Q5TCH4 519 aa10.86□□□□□ -0.67
HERC4-207ENST00000460168 RSRC2Q7L4I2 434 aaKnown RBP10.86□□□□□ -0.67
HERC4-207ENST00000460168 BPHLQ86WA6 291 aaPredicted RBP10.86□□□□□ -0.67
HERC4-207ENST00000460168 CHCHD4Q8N4Q1 142 aa10.86□□□□□ -0.67
HERC4-207ENST00000460168 DCLK2Q8N568 766 aa10.86□□□□□ -0.67
HERC4-207ENST00000460168 UBL4BQ8N7F7 174 aa10.86□□□□□ -0.67
HERC4-207ENST00000460168 KBTBD7Q8WVZ9 684 aa10.86□□□□□ -0.67
HERC4-207ENST00000460168 PPP2R3CQ969Q6 453 aa10.86□□□□□ -0.67
HERC4-207ENST00000460168 PPP1R14BQ96C90 147 aa10.86□□□□□ -0.67
HERC4-207ENST00000460168 PBKQ96KB5 322 aa10.86□□□□□ -0.67
HERC4-207ENST00000460168 DCAF16Q9NXF7 216 aa10.86□□□□□ -0.67
HERC4-207ENST00000460168 EHD2Q9NZN4 543 aa10.86□□□□□ -0.67
HERC4-207ENST00000460168 TDRD15B5MCY1 1934 aaKnown RBP10.86□□□□□ -0.67
HERC4-207ENST00000460168 MIF4GDA9UHW6 222 aaKnown RBP10.86□□□□□ -0.67
HERC4-207ENST00000460168 C9IYK1 514 aa10.86□□□□□ -0.67
HERC4-207ENST00000460168 CES2O00748 559 aa10.86□□□□□ -0.67
HERC4-207ENST00000460168 RPL9P32969 192 aaKnown RBP10.86□□□□□ -0.67
HERC4-207ENST00000460168 RNASE9P60153 205 aaKnown RBP10.86□□□□□ -0.67
HERC4-207ENST00000460168 CBX3Q13185 183 aa10.86□□□□□ -0.67
HERC4-207ENST00000460168 PTPN20Q4JDL3 420 aa10.86□□□□□ -0.67
HERC4-207ENST00000460168 PPP1R26Q5T8A7 1209 aaPredicted RBP10.86□□□□□ -0.67
HERC4-207ENST00000460168 PLEKHA7Q6IQ23 1121 aa10.86□□□□□ -0.67
HERC4-207ENST00000460168 DNAJC24Q6P3W2 148 aa10.86□□□□□ -0.67
HERC4-207ENST00000460168 GLB1LQ6UWU2 654 aa10.86□□□□□ -0.67
HERC4-207ENST00000460168 CTU1Q7Z7A3 348 aaKnown RBP10.86□□□□□ -0.67
HERC4-207ENST00000460168 TOP6BLQ8N6T0 577 aa10.86□□□□□ -0.67
HERC4-207ENST00000460168 UBA3Q8TBC4 463 aa10.86□□□□□ -0.67
HERC4-207ENST00000460168 RABGGTAQ92696 567 aa10.86□□□□□ -0.67
HERC4-207ENST00000460168 LRRC45Q96CN5 670 aa10.86□□□□□ -0.67
HERC4-207ENST00000460168 TSC22D3Q99576 134 aa10.86□□□□□ -0.67
HERC4-207ENST00000460168 FUT8Q9BYC5 575 aa10.86□□□□□ -0.67
HERC4-207ENST00000460168 DPEP3Q9H4B8 488 aa10.86□□□□□ -0.67
HERC4-207ENST00000460168 SMARCAL1Q9NZC9 954 aa10.86□□□□□ -0.67
HERC4-207ENST00000460168 HESX1Q9UBX0 185 aa10.86□□□□□ -0.67
HERC4-207ENST00000460168 ACAD8Q9UKU7 415 aa10.86□□□□□ -0.67
HERC4-207ENST00000460168 DCDC2CA8MYV0 355 aa10.85□□□□□ -0.67
HERC4-207ENST00000460168 HCRTO43612 131 aa10.85□□□□□ -0.67
HERC4-207ENST00000460168 NBNO60934 754 aa10.85□□□□□ -0.67
HERC4-207ENST00000460168 B3GAT3O94766 335 aa10.85□□□□□ -0.67
HERC4-207ENST00000460168 EOMESO95936 686 aa10.85□□□□□ -0.67
HERC4-207ENST00000460168 FGFR1P11362 822 aa10.85□□□□□ -0.67
HERC4-207ENST00000460168 ENDOUP21128 410 aaKnown RBP10.85□□□□□ -0.67
HERC4-207ENST00000460168 LMO2P25791 158 aa10.85□□□□□ -0.67
HERC4-207ENST00000460168 SLC8A1P32418 973 aa10.85□□□□□ -0.67
HERC4-207ENST00000460168 GPD2P43304 727 aa10.85□□□□□ -0.67
HERC4-207ENST00000460168 PDCLQ13371 301 aa10.85□□□□□ -0.67
HERC4-207ENST00000460168 UPP1Q16831 310 aa10.85□□□□□ -0.67
HERC4-207ENST00000460168 GOLGA7BQ2TAP0 167 aa10.85□□□□□ -0.67
HERC4-207ENST00000460168 DCUN1D2Q6PH85 259 aa10.85□□□□□ -0.67
HERC4-207ENST00000460168 LCLAT1Q6UWP7 414 aa10.85□□□□□ -0.67
HERC4-207ENST00000460168 KRT77Q7Z794 578 aa10.85□□□□□ -0.67
HERC4-207ENST00000460168 ZNF598Q86UK7 904 aaKnown RBP10.85□□□□□ -0.67
HERC4-207ENST00000460168 RTN4RL1Q86UN2 441 aaPredicted RBP10.85□□□□□ -0.67
HERC4-207ENST00000460168 NOA1Q8NC60 698 aaKnown RBP10.85□□□□□ -0.67
HERC4-207ENST00000460168 SPATA4Q8NEY3 305 aa10.85□□□□□ -0.67
HERC4-207ENST00000460168 C18orf8Q96DM3 657 aa10.85□□□□□ -0.67
HERC4-207ENST00000460168 ZNF333Q96JL9 665 aa10.85□□□□□ -0.67
HERC4-207ENST00000460168 TNIP3Q96KP6 325 aa10.85□□□□□ -0.67
HERC4-207ENST00000460168 SENP8Q96LD8 212 aa10.85□□□□□ -0.67
HERC4-207ENST00000460168 MCEEQ96PE7 176 aa10.85□□□□□ -0.67
HERC4-207ENST00000460168 CPXM1Q96SM3 734 aa10.85□□□□□ -0.67
HERC4-207ENST00000460168 PAAF1Q9BRP4 392 aa10.85□□□□□ -0.67
HERC4-207ENST00000460168 WNT8AQ9H1J5 351 aa10.85□□□□□ -0.67
HERC4-207ENST00000460168 HIPK3Q9H422 1215 aa10.85□□□□□ -0.67
HERC4-207ENST00000460168 KLC4Q9NSK0 619 aa10.85□□□□□ -0.67
HERC4-207ENST00000460168 CYTH4Q9UIA0 394 aa10.85□□□□□ -0.67
HERC4-207ENST00000460168 NME7Q9Y5B8 376 aa10.85□□□□□ -0.67
HERC4-207ENST00000460168 H3BQF6 201 aa10.85□□□□□ -0.67
HERC4-207ENST00000460168 TTI1O43156 1089 aa10.85□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 30.2 ms